RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 TMEM191BP0C7N4 346 aa13.41□□□□□ -0.26
HLA-DQB1-203ENST00000399082 TNNI1P19237 187 aa13.41□□□□□ -0.26
HLA-DQB1-203ENST00000399082 RPL9P32969 192 aaKnown RBP13.41□□□□□ -0.26
HLA-DQB1-203ENST00000399082 PPM1AP35813 382 aa13.41□□□□□ -0.26
HLA-DQB1-203ENST00000399082 BRCC3P46736 316 aa13.41□□□□□ -0.26
HLA-DQB1-203ENST00000399082 ALDH7A1P49419 539 aaKnown RBP13.41□□□□□ -0.26
HLA-DQB1-203ENST00000399082 AARSP49588 968 aaKnown RBP eCLIP13.41□□□□□ -0.26
HLA-DQB1-203ENST00000399082 IQCB1Q15051 598 aa13.41□□□□□ -0.26
HLA-DQB1-203ENST00000399082 DUOXA2Q1HG44 320 aa13.41□□□□□ -0.26
HLA-DQB1-203ENST00000399082 ZACNQ401N2 412 aa13.41□□□□□ -0.26
HLA-DQB1-203ENST00000399082 HSP90AA4PQ58FG1 418 aa13.41□□□□□ -0.26
HLA-DQB1-203ENST00000399082 SV2AQ7L0J3 742 aa13.41□□□□□ -0.26
HLA-DQB1-203ENST00000399082 TAS1R1Q7RTX1 841 aa13.41□□□□□ -0.26
HLA-DQB1-203ENST00000399082 FRMD5Q7Z6J6 570 aa13.41□□□□□ -0.26
HLA-DQB1-203ENST00000399082 DHX40Q8IX18 779 aaKnown RBP13.41□□□□□ -0.26
HLA-DQB1-203ENST00000399082 AOPEPQ8N6M6 819 aa13.41□□□□□ -0.26
HLA-DQB1-203ENST00000399082 DDX27Q96GQ7 796 aaKnown RBP13.41□□□□□ -0.26
HLA-DQB1-203ENST00000399082 CNOT6LQ96LI5 555 aaKnown RBP13.41□□□□□ -0.26
HLA-DQB1-203ENST00000399082 FNBP1Q96RU3 617 aa13.41□□□□□ -0.26
HLA-DQB1-203ENST00000399082 BPIFA3Q9BQP9 254 aa13.41□□□□□ -0.26
HLA-DQB1-203ENST00000399082 PRDM12Q9H4Q4 367 aa13.41□□□□□ -0.26
HLA-DQB1-203ENST00000399082 AAASQ9NRG9 546 aa13.41□□□□□ -0.26
HLA-DQB1-203ENST00000399082 ARMCX3Q9UH62 379 aaPredicted RBP13.41□□□□□ -0.26
HLA-DQB1-203ENST00000399082 ADAM28Q9UKQ2 775 aa13.41□□□□□ -0.26
HLA-DQB1-203ENST00000399082 PCDHB12Q9Y5F1 795 aa13.41□□□□□ -0.26
HLA-DQB1-203ENST00000399082 MYO9BQ13459 2157 aa13.4□□□□□ -0.26
HLA-DQB1-203ENST00000399082 I3L4J1 428 aa13.4□□□□□ -0.26
HLA-DQB1-203ENST00000399082 TULP1O00294 542 aaPredicted RBP13.4□□□□□ -0.26
HLA-DQB1-203ENST00000399082 IKBKBO14920 756 aa13.4□□□□□ -0.26
HLA-DQB1-203ENST00000399082 LRRN2O75325 713 aa13.4□□□□□ -0.26
HLA-DQB1-203ENST00000399082 B3GAT3O94766 335 aa13.4□□□□□ -0.26
HLA-DQB1-203ENST00000399082 KRT13P13646 458 aa13.4□□□□□ -0.26
HLA-DQB1-203ENST00000399082 POLR2BP30876 1174 aaKnown RBP13.4□□□□□ -0.26
HLA-DQB1-203ENST00000399082 GCLMP48507 274 aa13.4□□□□□ -0.26
HLA-DQB1-203ENST00000399082 MYL5Q02045 173 aa13.4□□□□□ -0.26
HLA-DQB1-203ENST00000399082 GPM6BQ13491 265 aa13.4□□□□□ -0.26
HLA-DQB1-203ENST00000399082 ADGRE1Q14246 886 aa13.4□□□□□ -0.26
HLA-DQB1-203ENST00000399082 CCDC40Q4G0X9 1142 aa13.4□□□□□ -0.26
HLA-DQB1-203ENST00000399082 CBWD6Q4V339 395 aa13.4□□□□□ -0.26
HLA-DQB1-203ENST00000399082 CBWD3Q5JTY5 395 aa13.4□□□□□ -0.26
HLA-DQB1-203ENST00000399082 CBWD5Q5RIA9 395 aa13.4□□□□□ -0.26
HLA-DQB1-203ENST00000399082 ZNF697Q5TEC3 545 aa13.4□□□□□ -0.26
HLA-DQB1-203ENST00000399082 GPR153Q6NV75 609 aa13.4□□□□□ -0.26
HLA-DQB1-203ENST00000399082 FUT10Q6P4F1 479 aa13.4□□□□□ -0.26
HLA-DQB1-203ENST00000399082 DCLRE1AQ6PJP8 1040 aa13.4□□□□□ -0.26
HLA-DQB1-203ENST00000399082 POF1BQ8WVV4 589 aa13.4□□□□□ -0.26
HLA-DQB1-203ENST00000399082 ANKRD36BP1Q96IX9 119 aa13.4□□□□□ -0.26
HLA-DQB1-203ENST00000399082 FAM161BQ96MY7 647 aa13.4□□□□□ -0.26
HLA-DQB1-203ENST00000399082 C11orf84Q9BUA3 381 aaPredicted RBP13.4□□□□□ -0.26
HLA-DQB1-203ENST00000399082 COLEC11Q9BWP8 271 aa13.4□□□□□ -0.26
HLA-DQB1-203ENST00000399082 THAP9Q9H5L6 903 aa13.4□□□□□ -0.26
HLA-DQB1-203ENST00000399082 METTL14Q9HCE5 456 aaKnown RBP13.4□□□□□ -0.26
HLA-DQB1-203ENST00000399082 FANCLQ9NW38 375 aa13.4□□□□□ -0.26
HLA-DQB1-203ENST00000399082 ITGA11Q9UKX5 1188 aa13.4□□□□□ -0.26
HLA-DQB1-203ENST00000399082 PCDHGC5Q9Y5F6 944 aa13.4□□□□□ -0.26
HLA-DQB1-203ENST00000399082 FSCN2O14926 492 aa13.39□□□□□ -0.27
HLA-DQB1-203ENST00000399082 TNNC2P02585 160 aa13.39□□□□□ -0.27
HLA-DQB1-203ENST00000399082 ZNF18P17022 549 aa13.39□□□□□ -0.27
HLA-DQB1-203ENST00000399082 IRS1P35568 1242 aa13.39□□□□□ -0.27
HLA-DQB1-203ENST00000399082 ZNF165P49910 485 aa13.39□□□□□ -0.27
HLA-DQB1-203ENST00000399082 ZNF445P59923 1031 aa13.39□□□□□ -0.27
HLA-DQB1-203ENST00000399082 ERVFC1P60507 584 aa13.39□□□□□ -0.27
HLA-DQB1-203ENST00000399082 TIGD5Q53EQ6 642 aa13.39□□□□□ -0.27
HLA-DQB1-203ENST00000399082 DCAF17Q5H9S7 520 aaPredicted RBP13.39□□□□□ -0.27
HLA-DQB1-203ENST00000399082 LRSAM1Q6UWE0 723 aa13.39□□□□□ -0.27
HLA-DQB1-203ENST00000399082 DDX53Q86TM3 631 aaKnown RBP13.39□□□□□ -0.27
HLA-DQB1-203ENST00000399082 TAS1R2Q8TE23 839 aa13.39□□□□□ -0.27
HLA-DQB1-203ENST00000399082 CACTINQ8WUQ7 758 aaKnown RBP13.39□□□□□ -0.27
HLA-DQB1-203ENST00000399082 ELMO3Q96BJ8 720 aa13.39□□□□□ -0.27
HLA-DQB1-203ENST00000399082 TMEM169Q96HH4 297 aa13.39□□□□□ -0.27
HLA-DQB1-203ENST00000399082 B3GALT6Q96L58 329 aa13.39□□□□□ -0.27
HLA-DQB1-203ENST00000399082 GUCD1Q96NT3 240 aa13.39□□□□□ -0.27
HLA-DQB1-203ENST00000399082 HERC2P3Q9BVR0 1158 aa13.39□□□□□ -0.27
HLA-DQB1-203ENST00000399082 ZBP1Q9H171 429 aa13.39□□□□□ -0.27
HLA-DQB1-203ENST00000399082 XYLT2Q9H1B5 865 aa13.39□□□□□ -0.27
HLA-DQB1-203ENST00000399082 CBX8Q9HC52 389 aa13.39□□□□□ -0.27
HLA-DQB1-203ENST00000399082 AGAP1Q9UPQ3 857 aa13.39□□□□□ -0.27
HLA-DQB1-203ENST00000399082 LZTS1Q9Y250 596 aa13.39□□□□□ -0.27
HLA-DQB1-203ENST00000399082 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.39□□□□□ -0.27
HLA-DQB1-203ENST00000399082 MYO7AQ13402 2215 aa13.39□□□□□ -0.27
HLA-DQB1-203ENST00000399082 CARNS1A5YM72 827 aa13.38□□□□□ -0.27
HLA-DQB1-203ENST00000399082 TADA2AO75478 443 aa13.38□□□□□ -0.27
HLA-DQB1-203ENST00000399082 FGFR1OPO95684 399 aaKnown RBP13.38□□□□□ -0.27
HLA-DQB1-203ENST00000399082 GNA14O95837 355 aa13.38□□□□□ -0.27
HLA-DQB1-203ENST00000399082 SOD2P04179 222 aa13.38□□□□□ -0.27
HLA-DQB1-203ENST00000399082 CLCN6P51797 869 aa13.38□□□□□ -0.27
HLA-DQB1-203ENST00000399082 LILRA4P59901 499 aa13.38□□□□□ -0.27
HLA-DQB1-203ENST00000399082 MYL6P60660 151 aa13.38□□□□□ -0.27
HLA-DQB1-203ENST00000399082 TCERG1LQ5VWI1 586 aa13.38□□□□□ -0.27
HLA-DQB1-203ENST00000399082 APTXQ7Z2E3 356 aaKnown RBP13.38□□□□□ -0.27
HLA-DQB1-203ENST00000399082 LRRC52Q8N7C0 313 aa13.38□□□□□ -0.27
HLA-DQB1-203ENST00000399082 SEMA4DQ92854 862 aa13.38□□□□□ -0.27
HLA-DQB1-203ENST00000399082 SUSD3Q96L08 255 aa13.38□□□□□ -0.27
HLA-DQB1-203ENST00000399082 MMRN2Q9H8L6 949 aa13.38□□□□□ -0.27
HLA-DQB1-203ENST00000399082 TMEM8AQ9HCN3 771 aa13.38□□□□□ -0.27
HLA-DQB1-203ENST00000399082 CHST7Q9NS84 486 aa13.38□□□□□ -0.27
HLA-DQB1-203ENST00000399082 SF3B1O75533 1304 aaKnown RBP eCLIP13.38□□□□□ -0.27
HLA-DQB1-203ENST00000399082 KCNJ18B7U540 433 aa13.37□□□□□ -0.27
HLA-DQB1-203ENST00000399082 M0QZQ0 153 aa13.37□□□□□ -0.27
HLA-DQB1-203ENST00000399082 LILRB3O75022 631 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms