RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 KCNA2P16389 499 aa9.82□□□□□ -0.84
ATL3-201ENST00000398868 SP8Q8IXZ3 490 aa9.82□□□□□ -0.84
ATL3-201ENST00000398868 ZBED8Q8IZ13 594 aa9.82□□□□□ -0.84
ATL3-201ENST00000398868 GPRC5AQ8NFJ5 357 aa9.82□□□□□ -0.84
ATL3-201ENST00000398868 INTS2Q9H0H0 1204 aaKnown RBP9.82□□□□□ -0.84
ATL3-201ENST00000398868 DDX47Q9H0S4 455 aaKnown RBP9.82□□□□□ -0.84
ATL3-201ENST00000398868 FLT1P17948 1338 aa9.82□□□□□ -0.84
ATL3-201ENST00000398868 ANKARQ7Z5J8 1434 aa9.82□□□□□ -0.84
ATL3-201ENST00000398868 NFIBO00712 420 aa9.82□□□□□ -0.84
ATL3-201ENST00000398868 EIF3BP55884 814 aaKnown RBP9.82□□□□□ -0.84
ATL3-201ENST00000398868 TOB2Q14106 344 aaPredicted RBP9.82□□□□□ -0.84
ATL3-201ENST00000398868 FSCBQ5H9T9 825 aa9.82□□□□□ -0.84
ATL3-201ENST00000398868 GJB7Q6PEY0 223 aa9.82□□□□□ -0.84
ATL3-201ENST00000398868 BNIPLQ7Z465 357 aa9.82□□□□□ -0.84
ATL3-201ENST00000398868 OR2W6PQ8NHA6 318 aa9.82□□□□□ -0.84
ATL3-201ENST00000398868 MCEEQ96PE7 176 aa9.82□□□□□ -0.84
ATL3-201ENST00000398868 SENP2Q9HC62 589 aa9.82□□□□□ -0.84
ATL3-201ENST00000398868 FBXL21Q9UKT6 434 aa9.82□□□□□ -0.84
ATL3-201ENST00000398868 HSPA6P17066 643 aa9.81□□□□□ -0.84
ATL3-201ENST00000398868 TPP2P29144 1249 aaPredicted RBP9.81□□□□□ -0.84
ATL3-201ENST00000398868 KLK7P49862 253 aa9.81□□□□□ -0.84
ATL3-201ENST00000398868 FOXO4P98177 505 aa9.81□□□□□ -0.84
ATL3-201ENST00000398868 RABGAP1LQ5R372 815 aa9.81□□□□□ -0.84
ATL3-201ENST00000398868 TTC8Q8TAM2 541 aa9.81□□□□□ -0.84
ATL3-201ENST00000398868 SENP6Q9GZR1 1112 aaPredicted RBP9.81□□□□□ -0.84
ATL3-201ENST00000398868 H0Y626 953 aa9.81□□□□□ -0.84
ATL3-201ENST00000398868 CTIFO43310 598 aaKnown RBP9.81□□□□□ -0.84
ATL3-201ENST00000398868 ARIH2O95376 493 aa9.81□□□□□ -0.84
ATL3-201ENST00000398868 NDUFB10O96000 172 aa9.81□□□□□ -0.84
ATL3-201ENST00000398868 KLC1Q07866 573 aa9.81□□□□□ -0.84
ATL3-201ENST00000398868 SDE2Q6IQ49 451 aa9.81□□□□□ -0.84
ATL3-201ENST00000398868 CARNMT1Q8N4J0 409 aa9.81□□□□□ -0.84
ATL3-201ENST00000398868 TRIM11Q96F44 468 aa9.81□□□□□ -0.84
ATL3-201ENST00000398868 TAAR1Q96RJ0 339 aa9.81□□□□□ -0.84
ATL3-201ENST00000398868 GLIS2Q9BZE0 524 aaPredicted RBP9.81□□□□□ -0.84
ATL3-201ENST00000398868 KLHL25Q9H0H3 589 aa9.81□□□□□ -0.84
ATL3-201ENST00000398868 CERS4Q9HA82 394 aa9.81□□□□□ -0.84
ATL3-201ENST00000398868 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.81□□□□□ -0.84
ATL3-201ENST00000398868 MYO3BQ8WXR4 1341 aa9.81□□□□□ -0.84
ATL3-201ENST00000398868 PCP11498 1178 aaKnown RBP9.81□□□□□ -0.84
ATL3-201ENST00000398868 MYL4P12829 197 aa9.81□□□□□ -0.84
ATL3-201ENST00000398868 NPEPPSP55786 919 aa9.81□□□□□ -0.84
ATL3-201ENST00000398868 CUL1Q13616 776 aa9.81□□□□□ -0.84
ATL3-201ENST00000398868 TMEM132DQ14C87 1099 aa9.81□□□□□ -0.84
ATL3-201ENST00000398868 NCAPHQ15003 741 aa9.81□□□□□ -0.84
ATL3-201ENST00000398868 MFN1Q8IWA4 741 aa9.81□□□□□ -0.84
ATL3-201ENST00000398868 SLC44A2Q8IWA5 706 aaPredicted RBP9.81□□□□□ -0.84
ATL3-201ENST00000398868 NDEL1Q9GZM8 345 aa9.81□□□□□ -0.84
ATL3-201ENST00000398868 CDV3Q9UKY7 258 aaKnown RBP9.81□□□□□ -0.84
ATL3-201ENST00000398868 SMAPO00193 183 aa9.81□□□□□ -0.84
ATL3-201ENST00000398868 LZTS3O60299 673 aaPredicted RBP9.81□□□□□ -0.84
ATL3-201ENST00000398868 TSPAN3O60637 253 aa9.81□□□□□ -0.84
ATL3-201ENST00000398868 ATP1A1P05023 1023 aaKnown RBP9.81□□□□□ -0.84
ATL3-201ENST00000398868 ZCCHC18P0CG32 403 aa9.81□□□□□ -0.84
ATL3-201ENST00000398868 PYGBP11216 843 aa9.81□□□□□ -0.84
ATL3-201ENST00000398868 CPA2P48052 419 aa9.81□□□□□ -0.84
ATL3-201ENST00000398868 PRAMEF19Q5SWL8 479 aa9.81□□□□□ -0.84
ATL3-201ENST00000398868 RARS2Q5T160 578 aaKnown RBP9.81□□□□□ -0.84
ATL3-201ENST00000398868 CCDC81Q6ZN84 652 aa9.81□□□□□ -0.84
ATL3-201ENST00000398868 TLK2Q86UE8 772 aa9.81□□□□□ -0.84
ATL3-201ENST00000398868 TRIM48Q8IWZ4 208 aa9.81□□□□□ -0.84
ATL3-201ENST00000398868 GPD1LQ8N335 351 aa9.81□□□□□ -0.84
ATL3-201ENST00000398868 THTPAQ9BU02 230 aa9.81□□□□□ -0.84
ATL3-201ENST00000398868 NCAM1P13591 858 aa9.81□□□□□ -0.84
ATL3-201ENST00000398868 FCGRTP55899 365 aa9.81□□□□□ -0.84
ATL3-201ENST00000398868 COPS2P61201 443 aa9.81□□□□□ -0.84
ATL3-201ENST00000398868 KNOP1Q1ED39 458 aaKnown RBP9.81□□□□□ -0.84
ATL3-201ENST00000398868 RBM23Q86U06 439 aaKnown RBP9.81□□□□□ -0.84
ATL3-201ENST00000398868 PTPRHQ9HD43 1115 aa9.81□□□□□ -0.84
ATL3-201ENST00000398868 LATS2Q9NRM7 1088 aa9.81□□□□□ -0.84
ATL3-201ENST00000398868 TBC1D23Q9NUY8 699 aa9.81□□□□□ -0.84
ATL3-201ENST00000398868 SMARCAL1Q9NZC9 954 aa9.81□□□□□ -0.84
ATL3-201ENST00000398868 TFR2Q9UP52 801 aa9.81□□□□□ -0.84
ATL3-201ENST00000398868 PCDHA10Q9Y5I2 948 aa9.81□□□□□ -0.84
ATL3-201ENST00000398868 ASB14A6NK59 587 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 AP3B1O00203 1094 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 HNRNPH1P31943 449 aaKnown RBP9.8□□□□□ -0.84
ATL3-201ENST00000398868 SOAT1P35610 550 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 PPARGP37231 505 aaPredicted RBP9.8□□□□□ -0.84
ATL3-201ENST00000398868 ROR1Q01973 937 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 PDIA2Q13087 525 aaKnown RBP9.8□□□□□ -0.84
ATL3-201ENST00000398868 MTF1Q14872 753 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 SURF1Q15526 300 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 CLEC4GQ6UXB4 293 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 ZNF614Q8N883 585 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 SNX31Q8N9S9 440 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 GPRC5CQ9NQ84 441 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 KCNQ5Q9NR82 932 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 ZSCAN32Q9NX65 697 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 APRTP07741 180 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 TCF7P36402 384 aaPredicted RBP9.8□□□□□ -0.84
ATL3-201ENST00000398868 PAPOLAP51003 745 aaKnown RBP9.8□□□□□ -0.84
ATL3-201ENST00000398868 DUOXA2Q1HG44 320 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 ZRANB3Q5FWF4 1079 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 BZW1Q7L1Q6 419 aaKnown RBP9.8□□□□□ -0.84
ATL3-201ENST00000398868 MCPH1Q8NEM0 835 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 RIN3Q8TB24 985 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 OMA1Q96E52 524 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 BRIP1Q9BX63 1249 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 OSGEPL1Q9H4B0 414 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms