RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 TKTP29401 623 aaKnown RBP22.91■■□□□ 1.26
TSPAN4-206ENST00000397408 STIM1Q13586 685 aa22.91■■□□□ 1.26
TSPAN4-206ENST00000397408 PSMD6Q15008 389 aa22.91■■□□□ 1.26
TSPAN4-206ENST00000397408 NFIL3Q16649 462 aa22.91■■□□□ 1.26
TSPAN4-206ENST00000397408 CTC1Q2NKJ3 1217 aa22.91■■□□□ 1.26
TSPAN4-206ENST00000397408 CEP135Q66GS9 1140 aa22.91■■□□□ 1.26
TSPAN4-206ENST00000397408 PRSS55Q6UWB4 352 aaPredicted RBP22.91■■□□□ 1.26
TSPAN4-206ENST00000397408 ADSSL1Q8N142 457 aa22.91■■□□□ 1.26
TSPAN4-206ENST00000397408 CCDC127Q96BQ5 260 aa22.91■■□□□ 1.26
TSPAN4-206ENST00000397408 FNBP1Q96RU3 617 aa22.91■■□□□ 1.26
TSPAN4-206ENST00000397408 NUP62CLQ9H1M0 184 aa22.91■■□□□ 1.26
TSPAN4-206ENST00000397408 ANO9A1A5B4 782 aa22.91■■□□□ 1.26
TSPAN4-206ENST00000397408 GLP2RO95838 553 aa22.91■■□□□ 1.26
TSPAN4-206ENST00000397408 KCNA5P22460 613 aa22.91■■□□□ 1.26
TSPAN4-206ENST00000397408 FGFR3P22607 806 aa22.91■■□□□ 1.26
TSPAN4-206ENST00000397408 CASP4P49662 377 aa22.91■■□□□ 1.26
TSPAN4-206ENST00000397408 RBM10P98175 930 aaKnown RBP22.91■■□□□ 1.26
TSPAN4-206ENST00000397408 ADAM15Q13444 863 aa22.91■■□□□ 1.26
TSPAN4-206ENST00000397408 LLGL2Q6P1M3 1020 aa22.91■■□□□ 1.26
TSPAN4-206ENST00000397408 WDR49Q8IV35 697 aa22.91■■□□□ 1.26
TSPAN4-206ENST00000397408 GPR65Q8IYL9 337 aa22.91■■□□□ 1.26
TSPAN4-206ENST00000397408 C1orf127Q8N9H9 656 aa22.91■■□□□ 1.26
TSPAN4-206ENST00000397408 VN1R2Q8NFZ6 395 aa22.91■■□□□ 1.26
TSPAN4-206ENST00000397408 OR5B17Q8NGF7 314 aa22.91■■□□□ 1.26
TSPAN4-206ENST00000397408 GPT2Q8TD30 523 aa22.91■■□□□ 1.26
TSPAN4-206ENST00000397408 PIK3R5Q8WYR1 880 aa22.91■■□□□ 1.26
TSPAN4-206ENST00000397408 ANKRD36BP1Q96IX9 119 aa22.91■■□□□ 1.26
TSPAN4-206ENST00000397408 SUSD3Q96L08 255 aa22.91■■□□□ 1.26
TSPAN4-206ENST00000397408 MFSD14AQ96MC6 490 aa22.91■■□□□ 1.26
TSPAN4-206ENST00000397408 KLHL5Q96PQ7 755 aa22.91■■□□□ 1.26
TSPAN4-206ENST00000397408 CGRRF1Q99675 332 aa22.91■■□□□ 1.26
TSPAN4-206ENST00000397408 INTS13Q9NVM9 706 aa22.91■■□□□ 1.26
TSPAN4-206ENST00000397408 FRMD4BQ9Y2L6 1034 aa22.91■■□□□ 1.26
TSPAN4-206ENST00000397408 PIRO00625 290 aa22.9■■□□□ 1.26
TSPAN4-206ENST00000397408 PSMA7O14818 248 aa22.9■■□□□ 1.26
TSPAN4-206ENST00000397408 TEX28O15482 410 aa22.9■■□□□ 1.26
TSPAN4-206ENST00000397408 TBX10O75333 385 aa22.9■■□□□ 1.26
TSPAN4-206ENST00000397408 ITGB3P05106 788 aa22.9■■□□□ 1.26
TSPAN4-206ENST00000397408 RPL13P26373 211 aaKnown RBP22.9■■□□□ 1.26
TSPAN4-206ENST00000397408 NDUFV1P49821 464 aa22.9■■□□□ 1.26
TSPAN4-206ENST00000397408 PSMD5Q16401 504 aa22.9■■□□□ 1.26
TSPAN4-206ENST00000397408 EDRF1Q3B7T1 1238 aa22.9■■□□□ 1.26
TSPAN4-206ENST00000397408 TSG101Q99816 390 aa22.9■■□□□ 1.26
TSPAN4-206ENST00000397408 RXFP1Q9HBX9 757 aa22.9■■□□□ 1.26
TSPAN4-206ENST00000397408 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.9■■□□□ 1.26
TSPAN4-206ENST00000397408 BARX2Q9UMQ3 279 aaPredicted RBP22.9■■□□□ 1.26
TSPAN4-206ENST00000397408 HCFC2Q9Y5Z7 792 aa22.9■■□□□ 1.26
TSPAN4-206ENST00000397408 SCN1AP35498 2009 aa22.89■■□□□ 1.26
TSPAN4-206ENST00000397408 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.89■■□□□ 1.25
TSPAN4-206ENST00000397408 TNNC2P02585 160 aa22.89■■□□□ 1.25
TSPAN4-206ENST00000397408 ADH1AP07327 375 aa22.89■■□□□ 1.25
TSPAN4-206ENST00000397408 CD44P16070 742 aaKnown RBP22.89■■□□□ 1.25
TSPAN4-206ENST00000397408 RPL17P18621 184 aaKnown RBP22.89■■□□□ 1.25
TSPAN4-206ENST00000397408 TNNI1P19237 187 aa22.89■■□□□ 1.25
TSPAN4-206ENST00000397408 KLRC2P26717 231 aa22.89■■□□□ 1.25
TSPAN4-206ENST00000397408 POLR2BP30876 1174 aaKnown RBP22.89■■□□□ 1.25
TSPAN4-206ENST00000397408 AARSP49588 968 aaKnown RBP eCLIP22.89■■□□□ 1.258e-6■■■■■ 52.4
TSPAN4-206ENST00000397408 CREMQ03060 361 aa22.89■■□□□ 1.25
TSPAN4-206ENST00000397408 TFF2Q03403 129 aa22.89■■□□□ 1.25
TSPAN4-206ENST00000397408 CENPPQ6IPU0 288 aa22.89■■□□□ 1.25
TSPAN4-206ENST00000397408 TRIML1Q8N9V2 468 aa22.89■■□□□ 1.25
TSPAN4-206ENST00000397408 LNX1Q8TBB1 728 aaPredicted RBP22.89■■□□□ 1.25
TSPAN4-206ENST00000397408 GZF1Q9H116 711 aaPredicted RBP22.89■■□□□ 1.25
TSPAN4-206ENST00000397408 ITGA11Q9UKX5 1188 aa22.89■■□□□ 1.25
TSPAN4-206ENST00000397408 XIRP2A4UGR9 3374 aa22.88■■□□□ 1.25
TSPAN4-206ENST00000397408 TRIM49BA6NDI0 452 aa22.88■■□□□ 1.25
TSPAN4-206ENST00000397408 H3BQ06 376 aaPredicted RBP22.88■■□□□ 1.25
TSPAN4-206ENST00000397408 SYN3O14994 580 aa22.88■■□□□ 1.25
TSPAN4-206ENST00000397408 SPTLC1O15269 473 aa22.88■■□□□ 1.25
TSPAN4-206ENST00000397408 LTBRP36941 435 aa22.88■■□□□ 1.25
TSPAN4-206ENST00000397408 PPP1R2P41236 205 aa22.88■■□□□ 1.25
TSPAN4-206ENST00000397408 PMS1P54277 932 aaKnown RBP22.88■■□□□ 1.25
TSPAN4-206ENST00000397408 LILRA4P59901 499 aa22.88■■□□□ 1.25
TSPAN4-206ENST00000397408 DLX2Q07687 328 aaPredicted RBP22.88■■□□□ 1.25
TSPAN4-206ENST00000397408 ADAM9Q13443 819 aa22.88■■□□□ 1.25
TSPAN4-206ENST00000397408 KCNC3Q14003 757 aa22.88■■□□□ 1.25
TSPAN4-206ENST00000397408 DUOXA2Q1HG44 320 aa22.88■■□□□ 1.25
TSPAN4-206ENST00000397408 KLHL10Q6JEL2 608 aa22.88■■□□□ 1.25
TSPAN4-206ENST00000397408 PDXDC1Q6P996 788 aa22.88■■□□□ 1.25
TSPAN4-206ENST00000397408 DSTYKQ6XUX3 929 aa22.88■■□□□ 1.25
TSPAN4-206ENST00000397408 GLYCTKQ8IVS8 523 aa22.88■■□□□ 1.25
TSPAN4-206ENST00000397408 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.88■■□□□ 1.251e-6■■■■□ 22.2
TSPAN4-206ENST00000397408 PLEKHO2Q8TD55 490 aa22.88■■□□□ 1.25
TSPAN4-206ENST00000397408 ZNF560Q96MR9 790 aa22.88■■□□□ 1.25
TSPAN4-206ENST00000397408 POP1Q99575 1024 aaKnown RBP22.88■■□□□ 1.25
TSPAN4-206ENST00000397408 PCDHB8Q9UN66 801 aa22.88■■□□□ 1.25
TSPAN4-206ENST00000397408 SPTBN5Q9NRC6 3674 aaKnown RBP22.88■■□□□ 1.25
TSPAN4-206ENST00000397408 M0QZQ0 153 aa22.87■■□□□ 1.25
TSPAN4-206ENST00000397408 AKAP3O75969 853 aa22.87■■□□□ 1.25
TSPAN4-206ENST00000397408 KRT19P08727 400 aa22.87■■□□□ 1.25
TSPAN4-206ENST00000397408 SRGAP2BP0DMP2 458 aa22.87■■□□□ 1.25
TSPAN4-206ENST00000397408 TAF6P49848 677 aa22.87■■□□□ 1.25
TSPAN4-206ENST00000397408 VARS2Q5ST30 1063 aaKnown RBP22.87■■□□□ 1.25
TSPAN4-206ENST00000397408 ANKRD40Q6AI12 368 aa22.87■■□□□ 1.25
TSPAN4-206ENST00000397408 ANKS3Q6ZW76 656 aa22.87■■□□□ 1.25
TSPAN4-206ENST00000397408 PPFIBP1Q86W92 1011 aa22.87■■□□□ 1.25
TSPAN4-206ENST00000397408 CSGALNACT2Q8N6G5 542 aa22.87■■□□□ 1.25
TSPAN4-206ENST00000397408 CXorf38Q8TB03 319 aa22.87■■□□□ 1.25
TSPAN4-206ENST00000397408 EEF2KMTQ96G04 330 aa22.87■■□□□ 1.25
TSPAN4-206ENST00000397408 DHTKD1Q96HY7 919 aaPredicted RBP22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms