RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 UQCRHP07919 91 aa18.93■□□□□ 0.62
TNFSF13-205ENST00000396545 WEE2P0C1S8 567 aa18.93■□□□□ 0.62
TNFSF13-205ENST00000396545 SCP2P22307 547 aa18.93■□□□□ 0.62
TNFSF13-205ENST00000396545 ABCD1P33897 745 aa18.93■□□□□ 0.62
TNFSF13-205ENST00000396545 PTPN5P54829 565 aa18.93■□□□□ 0.62
TNFSF13-205ENST00000396545 FKBP3Q00688 224 aaKnown RBP18.93■□□□□ 0.62
TNFSF13-205ENST00000396545 MAN2A1Q16706 1144 aa18.93■□□□□ 0.62
TNFSF13-205ENST00000396545 RARS2Q5T160 578 aaKnown RBP18.93■□□□□ 0.62
TNFSF13-205ENST00000396545 KIAA1841Q6NSI8 718 aa18.93■□□□□ 0.62
TNFSF13-205ENST00000396545 ZBTB33Q86T24 672 aa18.93■□□□□ 0.62
TNFSF13-205ENST00000396545 C12orf76Q8N812 135 aaPredicted RBP18.93■□□□□ 0.62
TNFSF13-205ENST00000396545 RNF149Q8NC42 400 aa18.93■□□□□ 0.62
TNFSF13-205ENST00000396545 TCP11Q8WWU5 503 aa18.93■□□□□ 0.62
TNFSF13-205ENST00000396545 KIFAP3Q92845 792 aa18.93■□□□□ 0.62
TNFSF13-205ENST00000396545 RIPOR3Q96MK2 946 aa18.93■□□□□ 0.62
TNFSF13-205ENST00000396545 MRPL44Q9H9J2 332 aaKnown RBP18.93■□□□□ 0.62
TNFSF13-205ENST00000396545 PPP2R2CQ9Y2T4 447 aa18.93■□□□□ 0.62
TNFSF13-205ENST00000396545 RNF225M0QZC1 329 aaPredicted RBP18.93■□□□□ 0.62
TNFSF13-205ENST00000396545 ASAP2O43150 1006 aa18.93■□□□□ 0.62
TNFSF13-205ENST00000396545 HIP1RO75146 1068 aa18.93■□□□□ 0.62
TNFSF13-205ENST00000396545 DDHD2O94830 711 aa18.93■□□□□ 0.62
TNFSF13-205ENST00000396545 VCPP55072 806 aaKnown RBP18.93■□□□□ 0.62
TNFSF13-205ENST00000396545 MARSP56192 900 aaKnown RBP18.93■□□□□ 0.62
TNFSF13-205ENST00000396545 EDRF1Q3B7T1 1238 aa18.93■□□□□ 0.62
TNFSF13-205ENST00000396545 VWA3BQ502W6 1294 aa18.93■□□□□ 0.62
TNFSF13-205ENST00000396545 FIGNQ5HY92 759 aa18.93■□□□□ 0.62
TNFSF13-205ENST00000396545 KREMEN2Q8NCW0 462 aa18.93■□□□□ 0.62
TNFSF13-205ENST00000396545 EEF2KMTQ96G04 330 aa18.93■□□□□ 0.62
TNFSF13-205ENST00000396545 TMEM175Q9BSA9 504 aa18.93■□□□□ 0.62
TNFSF13-205ENST00000396545 NUP58Q9BVL2 599 aa18.93■□□□□ 0.62
TNFSF13-205ENST00000396545 TTYH3Q9C0H2 523 aa18.93■□□□□ 0.62
TNFSF13-205ENST00000396545 TBC1D7Q9P0N9 293 aa18.93■□□□□ 0.62
TNFSF13-205ENST00000396545 STK39Q9UEW8 545 aa18.93■□□□□ 0.62
TNFSF13-205ENST00000396545 CAPN11Q9UMQ6 739 aa18.93■□□□□ 0.62
TNFSF13-205ENST00000396545 PCDHB13Q9Y5F0 798 aa18.93■□□□□ 0.62
TNFSF13-205ENST00000396545 GOLGA6L9A6NEM1 432 aa18.92■□□□□ 0.62
TNFSF13-205ENST00000396545 PLS3P13797 630 aa18.92■□□□□ 0.62
TNFSF13-205ENST00000396545 TCF15Q12870 199 aa18.92■□□□□ 0.62
TNFSF13-205ENST00000396545 MAPK7Q13164 816 aa18.92■□□□□ 0.62
TNFSF13-205ENST00000396545 MTMR3Q13615 1198 aa18.92■□□□□ 0.62
TNFSF13-205ENST00000396545 IQCDQ96DY2 449 aa18.92■□□□□ 0.62
TNFSF13-205ENST00000396545 ST6GALNAC4Q9H4F1 302 aa18.92■□□□□ 0.62
TNFSF13-205ENST00000396545 XPNPEP1Q9NQW7 623 aa18.92■□□□□ 0.62
TNFSF13-205ENST00000396545 KANSL3Q9P2N6 904 aa18.92■□□□□ 0.62
TNFSF13-205ENST00000396545 SORCS3Q9UPU3 1222 aa18.92■□□□□ 0.62
TNFSF13-205ENST00000396545 MYO10Q9HD67 2058 aa18.91■□□□□ 0.62
TNFSF13-205ENST00000396545 TTC26A0AVF1 554 aa18.91■□□□□ 0.62
TNFSF13-205ENST00000396545 USO1O60763 962 aaKnown RBP18.91■□□□□ 0.62
TNFSF13-205ENST00000396545 GNA14O95837 355 aa18.91■□□□□ 0.62
TNFSF13-205ENST00000396545 CASP5P51878 434 aa18.91■□□□□ 0.62
TNFSF13-205ENST00000396545 PCBP1Q15365 356 aaKnown RBP eCLIP18.91■□□□□ 0.62
TNFSF13-205ENST00000396545 KNOP1Q1ED39 458 aaKnown RBP18.91■□□□□ 0.62
TNFSF13-205ENST00000396545 ATAT1Q5SQI0 421 aa18.91■□□□□ 0.62
TNFSF13-205ENST00000396545 FKBP15Q5T1M5 1219 aa18.91■□□□□ 0.62
TNFSF13-205ENST00000396545 RAD9BQ6WBX8 426 aa18.91■□□□□ 0.62
TNFSF13-205ENST00000396545 TOGARAM2Q6ZUX3 1019 aa18.91■□□□□ 0.62
TNFSF13-205ENST00000396545 ZNF720Q7Z2F6 126 aa18.91■□□□□ 0.62
TNFSF13-205ENST00000396545 TMTC1Q8IUR5 882 aa18.91■□□□□ 0.62
TNFSF13-205ENST00000396545 UBALD2Q8IYN6 164 aa18.91■□□□□ 0.62
TNFSF13-205ENST00000396545 SMG8Q8ND04 991 aaKnown RBP18.91■□□□□ 0.62
TNFSF13-205ENST00000396545 PHOX2BQ99453 314 aa18.91■□□□□ 0.62
TNFSF13-205ENST00000396545 DNAJC7Q99615 494 aa18.91■□□□□ 0.62
TNFSF13-205ENST00000396545 NDST4Q9H3R1 872 aa18.91■□□□□ 0.62
TNFSF13-205ENST00000396545 TRAF3IP3Q9Y228 551 aa18.91■□□□□ 0.62
TNFSF13-205ENST00000396545 SOWAHDA6NJG2 315 aa18.9■□□□□ 0.62
TNFSF13-205ENST00000396545 PDXKO00764 312 aa18.9■□□□□ 0.62
TNFSF13-205ENST00000396545 RIOK3O14730 519 aaKnown RBP18.9■□□□□ 0.62
TNFSF13-205ENST00000396545 INPPL1O15357 1258 aa18.9■□□□□ 0.62
TNFSF13-205ENST00000396545 TSPAN1O60635 241 aa18.9■□□□□ 0.62
TNFSF13-205ENST00000396545 LILRB3O75022 631 aa18.9■□□□□ 0.62
TNFSF13-205ENST00000396545 ERLIN2O94905 339 aa18.9■□□□□ 0.62
TNFSF13-205ENST00000396545 GCNT3O95395 438 aa18.9■□□□□ 0.62
TNFSF13-205ENST00000396545 POMCP01189 267 aa18.9■□□□□ 0.62
TNFSF13-205ENST00000396545 KRT9P35527 623 aa18.9■□□□□ 0.62
TNFSF13-205ENST00000396545 PTENP60484 403 aa18.9■□□□□ 0.62
TNFSF13-205ENST00000396545 MXD4Q14582 209 aaPredicted RBP18.9■□□□□ 0.62
TNFSF13-205ENST00000396545 SYCP1Q15431 976 aa18.9■□□□□ 0.62
TNFSF13-205ENST00000396545 NELFCDQ8IXH7 590 aa18.9■□□□□ 0.62
TNFSF13-205ENST00000396545 ZDHHC14Q8IZN3 488 aa18.9■□□□□ 0.62
TNFSF13-205ENST00000396545 DAW1Q8N136 415 aa18.9■□□□□ 0.62
TNFSF13-205ENST00000396545 FEZF2Q8TBJ5 459 aa18.9■□□□□ 0.62
TNFSF13-205ENST00000396545 USTQ9Y2C2 406 aa18.9■□□□□ 0.62
TNFSF13-205ENST00000396545 MYO15AQ9UKN7 3530 aa18.9■□□□□ 0.62
TNFSF13-205ENST00000396545 DENND4AQ7Z401 1863 aa18.9■□□□□ 0.62
TNFSF13-205ENST00000396545 A0A1W2PQJ5 194 aa18.89■□□□□ 0.62
TNFSF13-205ENST00000396545 H0YCG3 227 aa18.89■□□□□ 0.62
TNFSF13-205ENST00000396545 PES1O00541 588 aaKnown RBP18.89■□□□□ 0.62
TNFSF13-205ENST00000396545 CALUO43852 315 aaPredicted RBP18.89■□□□□ 0.62
TNFSF13-205ENST00000396545 PDGFBP01127 241 aaPredicted RBP18.89■□□□□ 0.62
TNFSF13-205ENST00000396545 ALDH2P05091 517 aa18.89■□□□□ 0.62
TNFSF13-205ENST00000396545 CNPP09543 421 aaKnown RBP18.89■□□□□ 0.62
TNFSF13-205ENST00000396545 AVPR2P30518 371 aa18.89■□□□□ 0.62
TNFSF13-205ENST00000396545 AXLP30530 894 aa18.89■□□□□ 0.62
TNFSF13-205ENST00000396545 CLCN4P51793 760 aa18.89■□□□□ 0.62
TNFSF13-205ENST00000396545 SMTNP53814 917 aa18.89■□□□□ 0.62
TNFSF13-205ENST00000396545 MTF1Q14872 753 aa18.89■□□□□ 0.62
TNFSF13-205ENST00000396545 NFIL3Q16649 462 aa18.89■□□□□ 0.62
TNFSF13-205ENST00000396545 TMC5Q6UXY8 1006 aa18.89■□□□□ 0.62
TNFSF13-205ENST00000396545 IFNLR1Q8IU57 520 aaPredicted RBP18.89■□□□□ 0.62
TNFSF13-205ENST00000396545 TDRD5Q8NAT2 981 aaKnown RBP18.89■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms