RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 GGA3Q9NZ52 723 aa9.89□□□□□ -0.83
NDE1-201ENST00000396354 SEPT9Q9UHD8 586 aaPredicted RBP9.89□□□□□ -0.83
NDE1-201ENST00000396354 SYNGAP1Q96PV0 1343 aa9.89□□□□□ -0.83
NDE1-201ENST00000396354 OTOFQ9HC10 1997 aa9.89□□□□□ -0.83
NDE1-201ENST00000396354 CCT8L1PA6NM43 557 aa9.89□□□□□ -0.83
NDE1-201ENST00000396354 CHUKO15111 745 aa9.89□□□□□ -0.83
NDE1-201ENST00000396354 PPFIA2O75334 1257 aa9.89□□□□□ -0.83
NDE1-201ENST00000396354 KCNA2P16389 499 aa9.89□□□□□ -0.83
NDE1-201ENST00000396354 CHRNB2P17787 502 aa9.89□□□□□ -0.83
NDE1-201ENST00000396354 NRLP54845 237 aa9.89□□□□□ -0.83
NDE1-201ENST00000396354 POU5F1Q01860 360 aaKnown RBP9.89□□□□□ -0.83
NDE1-201ENST00000396354 AUHQ13825 339 aaKnown RBP9.89□□□□□ -0.83
NDE1-201ENST00000396354 ERMARDQ5T6L9 678 aa9.89□□□□□ -0.83
NDE1-201ENST00000396354 INTS8Q75QN2 995 aaKnown RBP9.89□□□□□ -0.83
NDE1-201ENST00000396354 RASGEF1CQ8N431 466 aa9.89□□□□□ -0.83
NDE1-201ENST00000396354 GLIS1Q8NBF1 620 aa9.89□□□□□ -0.83
NDE1-201ENST00000396354 TMEM143Q96AN5 459 aa9.89□□□□□ -0.83
NDE1-201ENST00000396354 KLHL29Q96CT2 875 aa9.89□□□□□ -0.83
NDE1-201ENST00000396354 ZBTB45Q96K62 511 aaPredicted RBP9.89□□□□□ -0.83
NDE1-201ENST00000396354 ACCSQ96QU6 501 aa9.89□□□□□ -0.83
NDE1-201ENST00000396354 NCAPGQ9BPX3 1015 aa9.89□□□□□ -0.83
NDE1-201ENST00000396354 EHMT1Q9H9B1 1298 aa9.89□□□□□ -0.83
NDE1-201ENST00000396354 SLCO1B3Q9NPD5 702 aa9.89□□□□□ -0.83
NDE1-201ENST00000396354 KMT5AQ9NQR1 393 aa9.89□□□□□ -0.83
NDE1-201ENST00000396354 ANAPC5Q9UJX4 755 aa9.89□□□□□ -0.83
NDE1-201ENST00000396354 ZNF148Q9UQR1 794 aa9.89□□□□□ -0.83
NDE1-201ENST00000396354 LOC285556D6RIA3 1793 aa9.89□□□□□ -0.83
NDE1-201ENST00000396354 F5H423 210 aaPredicted RBP9.88□□□□□ -0.83
NDE1-201ENST00000396354 IGF2BP3O00425 579 aaKnown RBP eCLIP9.88□□□□□ -0.83
NDE1-201ENST00000396354 EZRP15311 586 aaKnown RBP9.88□□□□□ -0.83
NDE1-201ENST00000396354 ATF2P15336 505 aa9.88□□□□□ -0.83
NDE1-201ENST00000396354 SMTNP53814 917 aa9.88□□□□□ -0.83
NDE1-201ENST00000396354 FMO1Q01740 532 aa9.88□□□□□ -0.83
NDE1-201ENST00000396354 MPP2Q14168 576 aa9.88□□□□□ -0.83
NDE1-201ENST00000396354 FAM228AQ86W67 206 aa9.88□□□□□ -0.83
NDE1-201ENST00000396354 RHOT2Q8IXI1 618 aa9.88□□□□□ -0.83
NDE1-201ENST00000396354 CCDC33Q8N5R6 958 aa9.88□□□□□ -0.83
NDE1-201ENST00000396354 ZNF280CQ8ND82 737 aa9.88□□□□□ -0.83
NDE1-201ENST00000396354 RUBCNQ92622 972 aa9.88□□□□□ -0.83
NDE1-201ENST00000396354 NT5C1BQ96P26 610 aa9.88□□□□□ -0.83
NDE1-201ENST00000396354 TGS1Q96RS0 853 aaKnown RBP9.88□□□□□ -0.83
NDE1-201ENST00000396354 ADAM7Q9H2U9 754 aa9.88□□□□□ -0.83
NDE1-201ENST00000396354 ECT2Q9H8V3 914 aa9.88□□□□□ -0.83
NDE1-201ENST00000396354 LRRIQ4A6NIV6 560 aa9.88□□□□□ -0.83
NDE1-201ENST00000396354 PLS3P13797 630 aa9.88□□□□□ -0.83
NDE1-201ENST00000396354 CHRNA3P32297 505 aa9.88□□□□□ -0.83
NDE1-201ENST00000396354 NOP14P78316 857 aaKnown RBP9.88□□□□□ -0.83
NDE1-201ENST00000396354 FASTKD3Q14CZ7 662 aaKnown RBP9.88□□□□□ -0.83
NDE1-201ENST00000396354 KCNT1Q5JUK3 1230 aa9.88□□□□□ -0.83
NDE1-201ENST00000396354 TREML2Q5T2D2 321 aa9.88□□□□□ -0.83
NDE1-201ENST00000396354 ARHGEF16Q5VV41 709 aa9.88□□□□□ -0.83
NDE1-201ENST00000396354 NIPA1Q7RTP0 329 aa9.88□□□□□ -0.83
NDE1-201ENST00000396354 TAS1R3Q7RTX0 852 aa9.88□□□□□ -0.83
NDE1-201ENST00000396354 TRPM8Q7Z2W7 1104 aa9.88□□□□□ -0.83
NDE1-201ENST00000396354 ZBTB33Q86T24 672 aa9.88□□□□□ -0.83
NDE1-201ENST00000396354 VSIG10LQ86VR7 867 aa9.88□□□□□ -0.83
NDE1-201ENST00000396354 CCDC60Q8IWA6 550 aaPredicted RBP9.88□□□□□ -0.83
NDE1-201ENST00000396354 SGSM3Q96HU1 749 aa9.88□□□□□ -0.83
NDE1-201ENST00000396354 FNBP1Q96RU3 617 aa9.88□□□□□ -0.83
NDE1-201ENST00000396354 A1CFQ9NQ94 594 aaKnown RBP9.88□□□□□ -0.83
NDE1-201ENST00000396354 GABBR1Q9UBS5 961 aa9.88□□□□□ -0.83
NDE1-201ENST00000396354 SEL1LQ9UBV2 794 aa9.88□□□□□ -0.83
NDE1-201ENST00000396354 DCTN4Q9UJW0 460 aa9.88□□□□□ -0.83
NDE1-201ENST00000396354 GTPBP10A4D1E9 387 aaKnown RBP9.88□□□□□ -0.83
NDE1-201ENST00000396354 RASA4BC9J798 803 aa9.88□□□□□ -0.83
NDE1-201ENST00000396354 RASA4O43374 803 aa9.88□□□□□ -0.83
NDE1-201ENST00000396354 RTN2O75298 545 aa9.88□□□□□ -0.83
NDE1-201ENST00000396354 NR3C2P08235 984 aa9.88□□□□□ -0.83
NDE1-201ENST00000396354 CETPP11597 493 aa9.88□□□□□ -0.83
NDE1-201ENST00000396354 PTGIRP43119 386 aa9.88□□□□□ -0.83
NDE1-201ENST00000396354 CNTN2Q02246 1040 aa9.88□□□□□ -0.83
NDE1-201ENST00000396354 ADCY2Q08462 1091 aa9.88□□□□□ -0.83
NDE1-201ENST00000396354 OVGP1Q12889 678 aa9.88□□□□□ -0.83
NDE1-201ENST00000396354 TRAF1Q13077 416 aa9.88□□□□□ -0.83
NDE1-201ENST00000396354 TNFAIP1Q13829 316 aa9.88□□□□□ -0.83
NDE1-201ENST00000396354 SWSAP1Q6NVH7 229 aa9.88□□□□□ -0.83
NDE1-201ENST00000396354 SV2AQ7L0J3 742 aa9.88□□□□□ -0.83
NDE1-201ENST00000396354 HOMEZQ8IX15 550 aa9.88□□□□□ -0.83
NDE1-201ENST00000396354 TMEM161BQ8NDZ6 487 aa9.88□□□□□ -0.83
NDE1-201ENST00000396354 NOD2Q9HC29 1040 aa9.88□□□□□ -0.83
NDE1-201ENST00000396354 XPNPEP1Q9NQW7 623 aa9.88□□□□□ -0.83
NDE1-201ENST00000396354 ADAMTS5Q9UNA0 930 aa9.88□□□□□ -0.83
NDE1-201ENST00000396354 A6NNZ2 444 aa9.87□□□□□ -0.83
NDE1-201ENST00000396354 EDN1P05305 212 aa9.87□□□□□ -0.83
NDE1-201ENST00000396354 MUTP22033 750 aa9.87□□□□□ -0.83
NDE1-201ENST00000396354 RPS12P25398 132 aaKnown RBP9.87□□□□□ -0.83
NDE1-201ENST00000396354 CTNNA2P26232 953 aa9.87□□□□□ -0.83
NDE1-201ENST00000396354 NSFP46459 744 aaKnown RBP9.87□□□□□ -0.83
NDE1-201ENST00000396354 TUBB8Q3ZCM7 444 aa9.87□□□□□ -0.83
NDE1-201ENST00000396354 ZBTB41Q5SVQ8 909 aa9.87□□□□□ -0.83
NDE1-201ENST00000396354 AGBL2Q5U5Z8 902 aa9.87□□□□□ -0.83
NDE1-201ENST00000396354 C6orf89Q6UWU4 347 aa9.87□□□□□ -0.83
NDE1-201ENST00000396354 MCF2L2Q86YR7 1114 aa9.87□□□□□ -0.83
NDE1-201ENST00000396354 CCT6BQ92526 530 aa9.87□□□□□ -0.83
NDE1-201ENST00000396354 KLRG1Q96E93 195 aa9.87□□□□□ -0.83
NDE1-201ENST00000396354 MS4A4AQ96JQ5 239 aa9.87□□□□□ -0.83
NDE1-201ENST00000396354 RMDN2Q96LZ7 410 aa9.87□□□□□ -0.83
NDE1-201ENST00000396354 SAYSD1Q9NPB0 183 aa9.87□□□□□ -0.83
NDE1-201ENST00000396354 INTUQ9ULD6 942 aa9.87□□□□□ -0.83
NDE1-201ENST00000396354 UBE4BO95155 1302 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms