RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 RPL21P46778 160 aaKnown RBP17.9■□□□□ 0.46
NUP50-202ENST00000396096 C1QBPQ07021 282 aaKnown RBP17.9■□□□□ 0.46
NUP50-202ENST00000396096 PLCB4Q15147 1175 aa17.9■□□□□ 0.46
NUP50-202ENST00000396096 HSDL1Q3SXM5 330 aa17.9■□□□□ 0.46
NUP50-202ENST00000396096 PLEKHA7Q6IQ23 1121 aa17.9■□□□□ 0.46
NUP50-202ENST00000396096 IMPG2Q9BZV3 1241 aa17.9■□□□□ 0.46
NUP50-202ENST00000396096 MRPL47Q9HD33 250 aaKnown RBP17.9■□□□□ 0.46
NUP50-202ENST00000396096 CPSF3Q9UKF6 684 aaKnown RBP17.9■□□□□ 0.46
NUP50-202ENST00000396096 UMODL1Q5DID0 1318 aa17.9■□□□□ 0.46
NUP50-202ENST00000396096 SRRM3A6NNA2 597 aaPredicted RBP17.9■□□□□ 0.46
NUP50-202ENST00000396096 NOP56O00567 594 aaKnown RBP17.9■□□□□ 0.46
NUP50-202ENST00000396096 NUDT17P0C025 328 aa17.9■□□□□ 0.46
NUP50-202ENST00000396096 PROZP22891 400 aa17.9■□□□□ 0.46
NUP50-202ENST00000396096 TNFSF9P41273 254 aa17.9■□□□□ 0.46
NUP50-202ENST00000396096 KCTD2Q14681 263 aa17.9■□□□□ 0.46
NUP50-202ENST00000396096 MAPK6Q16659 721 aa17.9■□□□□ 0.46
NUP50-202ENST00000396096 DNAJC21Q5F1R6 531 aaKnown RBP17.9■□□□□ 0.46
NUP50-202ENST00000396096 ARFGAP2Q8N6H7 521 aa17.9■□□□□ 0.46
NUP50-202ENST00000396096 OR2W6PQ8NHA6 318 aa17.9■□□□□ 0.46
NUP50-202ENST00000396096 CDCA5Q96FF9 252 aa17.9■□□□□ 0.46
NUP50-202ENST00000396096 DDX27Q96GQ7 796 aaKnown RBP17.9■□□□□ 0.46
NUP50-202ENST00000396096 MMP19Q99542 508 aa17.9■□□□□ 0.46
NUP50-202ENST00000396096 TRIM7Q9C029 511 aa17.9■□□□□ 0.46
NUP50-202ENST00000396096 MROH8Q9H579 483 aa17.9■□□□□ 0.46
NUP50-202ENST00000396096 ADAM22Q9P0K1 906 aa17.9■□□□□ 0.46
NUP50-202ENST00000396096 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.9■□□□□ 0.46
NUP50-202ENST00000396096 SCINQ9Y6U3 715 aa17.9■□□□□ 0.46
NUP50-202ENST00000396096 PSTPIP1O43586 416 aa17.89■□□□□ 0.45
NUP50-202ENST00000396096 ZEB2O60315 1214 aa17.89■□□□□ 0.45
NUP50-202ENST00000396096 CFHP08603 1231 aa17.89■□□□□ 0.45
NUP50-202ENST00000396096 OSBPP22059 807 aa17.89■□□□□ 0.45
NUP50-202ENST00000396096 Q3C1V9 767 aa17.89■□□□□ 0.45
NUP50-202ENST00000396096 SEZ6Q53EL9 994 aa17.89■□□□□ 0.45
NUP50-202ENST00000396096 TSHZ1Q6ZSZ6 1077 aa17.89■□□□□ 0.45
NUP50-202ENST00000396096 FASTKD5Q7L8L6 764 aaKnown RBP17.89■□□□□ 0.45
NUP50-202ENST00000396096 FBXO25Q8TCJ0 367 aa17.89■□□□□ 0.45
NUP50-202ENST00000396096 EPB41L4BQ9H329 900 aa17.89■□□□□ 0.45
NUP50-202ENST00000396096 PABPC3Q9H361 631 aaKnown RBP17.89■□□□□ 0.45
NUP50-202ENST00000396096 ATP8A1Q9Y2Q0 1164 aa17.89■□□□□ 0.45
NUP50-202ENST00000396096 ANK1P16157 1881 aa17.89■□□□□ 0.45
NUP50-202ENST00000396096 PASKQ96RG2 1323 aa17.89■□□□□ 0.45
NUP50-202ENST00000396096 MCM3APO60318 1980 aa17.89■□□□□ 0.45
NUP50-202ENST00000396096 HARSP12081 509 aaKnown RBP17.88■□□□□ 0.45
NUP50-202ENST00000396096 MAN1A1P33908 653 aa17.88■□□□□ 0.45
NUP50-202ENST00000396096 PLTPP55058 493 aa17.88■□□□□ 0.45
NUP50-202ENST00000396096 MAMLD1Q13495 774 aa17.88■□□□□ 0.45
NUP50-202ENST00000396096 KCTD19Q17RG1 926 aaPredicted RBP17.88■□□□□ 0.45
NUP50-202ENST00000396096 TRIM50Q86XT4 487 aa17.88■□□□□ 0.45
NUP50-202ENST00000396096 CCDC105Q8IYK2 499 aa17.88■□□□□ 0.45
NUP50-202ENST00000396096 RNF149Q8NC42 400 aa17.88■□□□□ 0.45
NUP50-202ENST00000396096 SHCBP1Q8NEM2 672 aa17.88■□□□□ 0.45
NUP50-202ENST00000396096 ART4Q93070 314 aa17.88■□□□□ 0.45
NUP50-202ENST00000396096 C11orf70Q9BRQ4 267 aa17.88■□□□□ 0.45
NUP50-202ENST00000396096 FZD8Q9H461 694 aa17.88■□□□□ 0.45
NUP50-202ENST00000396096 SMARCAD1Q9H4L7 1026 aa17.88■□□□□ 0.45
NUP50-202ENST00000396096 PTPRHQ9HD43 1115 aa17.88■□□□□ 0.45
NUP50-202ENST00000396096 RNF181Q9P0P0 153 aa17.88■□□□□ 0.45
NUP50-202ENST00000396096 MTRF1LQ9UGC7 380 aaKnown RBP17.88■□□□□ 0.45
NUP50-202ENST00000396096 ZSWIM8A7E2V4 1837 aa17.88■□□□□ 0.45
NUP50-202ENST00000396096 ACKR2O00590 384 aa17.88■□□□□ 0.45
NUP50-202ENST00000396096 THAP12O43422 761 aa17.88■□□□□ 0.45
NUP50-202ENST00000396096 CST3P01034 146 aaPredicted RBP17.88■□□□□ 0.45
NUP50-202ENST00000396096 SRGAP2CP0DJJ0 459 aa17.88■□□□□ 0.45
NUP50-202ENST00000396096 MARK3P27448 753 aa17.88■□□□□ 0.45
NUP50-202ENST00000396096 ATP1A2P50993 1020 aa17.88■□□□□ 0.45
NUP50-202ENST00000396096 PMS2P54278 862 aa17.88■□□□□ 0.45
NUP50-202ENST00000396096 PDCLQ13371 301 aa17.88■□□□□ 0.45
NUP50-202ENST00000396096 TFDP1Q14186 410 aa17.88■□□□□ 0.45
NUP50-202ENST00000396096 DUOXA2Q1HG44 320 aa17.88■□□□□ 0.45
NUP50-202ENST00000396096 GPAT2Q6NUI2 795 aa17.88■□□□□ 0.45
NUP50-202ENST00000396096 SYDE1Q6ZW31 735 aaPredicted RBP17.88■□□□□ 0.45
NUP50-202ENST00000396096 ZBTB33Q86T24 672 aa17.88■□□□□ 0.45
NUP50-202ENST00000396096 DHX37Q8IY37 1157 aaKnown RBP17.88■□□□□ 0.45
NUP50-202ENST00000396096 SPATA33Q96N06 139 aa17.88■□□□□ 0.45
NUP50-202ENST00000396096 TCHPQ9BT92 498 aa17.88■□□□□ 0.45
NUP50-202ENST00000396096 NIF3L1Q9GZT8 377 aa17.88■□□□□ 0.45
NUP50-202ENST00000396096 HBP1O60381 514 aa17.87■□□□□ 0.45
NUP50-202ENST00000396096 ECEL1O95672 775 aa17.87■□□□□ 0.45
NUP50-202ENST00000396096 LSM8O95777 96 aaKnown RBP17.87■□□□□ 0.45
NUP50-202ENST00000396096 MDH1P40925 334 aaKnown RBP17.87■□□□□ 0.45
NUP50-202ENST00000396096 SGSM1Q2NKQ1 1148 aa17.87■□□□□ 0.45
NUP50-202ENST00000396096 SGO2Q562F6 1265 aa17.87■□□□□ 0.45
NUP50-202ENST00000396096 MPZL3Q6UWV2 235 aa17.87■□□□□ 0.45
NUP50-202ENST00000396096 MOB2Q70IA6 237 aa17.87■□□□□ 0.45
NUP50-202ENST00000396096 RHOT1Q8IXI2 618 aa17.87■□□□□ 0.45
NUP50-202ENST00000396096 LRRC71Q8N4P6 559 aa17.87■□□□□ 0.45
NUP50-202ENST00000396096 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.87■□□□□ 0.45
NUP50-202ENST00000396096 ZC3H15Q8WU90 426 aaKnown RBP17.87■□□□□ 0.45
NUP50-202ENST00000396096 ZNF606Q8WXB4 792 aa17.87■□□□□ 0.45
NUP50-202ENST00000396096 MTMR12Q9C0I1 747 aa17.87■□□□□ 0.45
NUP50-202ENST00000396096 LCMT1Q9UIC8 334 aa17.87■□□□□ 0.45
NUP50-202ENST00000396096 ASAP2O43150 1006 aa17.86■□□□□ 0.45
NUP50-202ENST00000396096 HOXC6P09630 235 aa17.86■□□□□ 0.45
NUP50-202ENST00000396096 MMP8P22894 467 aa17.86■□□□□ 0.45
NUP50-202ENST00000396096 SCARA3Q6AZY7 606 aa17.86■□□□□ 0.45
NUP50-202ENST00000396096 LLGL2Q6P1M3 1020 aa17.86■□□□□ 0.45
NUP50-202ENST00000396096 MMS22LQ6ZRQ5 1243 aa17.86■□□□□ 0.45
NUP50-202ENST00000396096 USP50Q70EL3 339 aaPredicted RBP17.86■□□□□ 0.45
NUP50-202ENST00000396096 SRLQ86TD4 932 aa17.86■□□□□ 0.45
NUP50-202ENST00000396096 PASD1Q8IV76 773 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms