RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 TTC27Q6P3X3 843 aa19.09■□□□□ 0.65
SREBF1-204ENST00000395756 CCDC50Q8IVM0 306 aa19.09■□□□□ 0.65
SREBF1-204ENST00000395756 GPRC5AQ8NFJ5 357 aa19.09■□□□□ 0.65
SREBF1-204ENST00000395756 ATG4AQ8WYN0 398 aa19.09■□□□□ 0.65
SREBF1-204ENST00000395756 NAP1L3Q99457 506 aaPredicted RBP19.09■□□□□ 0.65
SREBF1-204ENST00000395756 SMARCAD1Q9H4L7 1026 aa19.09■□□□□ 0.65
SREBF1-204ENST00000395756 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.09■□□□□ 0.65
SREBF1-204ENST00000395756 MIF4GDA9UHW6 222 aaKnown RBP19.09■□□□□ 0.65
SREBF1-204ENST00000395756 OPA1O60313 960 aa19.09■□□□□ 0.65
SREBF1-204ENST00000395756 TMEM191BP0C7N4 346 aa19.09■□□□□ 0.65
SREBF1-204ENST00000395756 TMOD1P28289 359 aa19.09■□□□□ 0.65
SREBF1-204ENST00000395756 CTNNA1P35221 906 aaKnown RBP19.09■□□□□ 0.65
SREBF1-204ENST00000395756 RAP1GAPP47736 663 aa19.09■□□□□ 0.65
SREBF1-204ENST00000395756 EFNA5P52803 228 aa19.09■□□□□ 0.65
SREBF1-204ENST00000395756 TMEM62Q0P6H9 643 aa19.09■□□□□ 0.65
SREBF1-204ENST00000395756 ATF7IP2Q5U623 682 aa19.09■□□□□ 0.65
SREBF1-204ENST00000395756 IQCKQ8N0W5 287 aa19.09■□□□□ 0.65
SREBF1-204ENST00000395756 WHAMMQ8TF30 809 aa19.09■□□□□ 0.65
SREBF1-204ENST00000395756 RUBCNQ92622 972 aa19.09■□□□□ 0.65
SREBF1-204ENST00000395756 MROH8Q9H579 483 aa19.09■□□□□ 0.65
SREBF1-204ENST00000395756 SLITRK6Q9H5Y7 841 aa19.09■□□□□ 0.65
SREBF1-204ENST00000395756 RNF19AQ9NV58 838 aa19.09■□□□□ 0.65
SREBF1-204ENST00000395756 A0A087WZ62 844 aa19.08■□□□□ 0.65
SREBF1-204ENST00000395756 ZC3H11AO75152 810 aaKnown RBP eCLIP19.08■□□□□ 0.65
SREBF1-204ENST00000395756 PIGRP01833 764 aa19.08■□□□□ 0.65
SREBF1-204ENST00000395756 PTENP60484 403 aa19.08■□□□□ 0.65
SREBF1-204ENST00000395756 TRIP13Q15645 432 aaPredicted RBP19.08■□□□□ 0.65
SREBF1-204ENST00000395756 FOXR1Q6PIV2 292 aa19.08■□□□□ 0.65
SREBF1-204ENST00000395756 CCDC137Q6PK04 289 aaKnown RBP19.08■□□□□ 0.65
SREBF1-204ENST00000395756 TCP11Q8WWU5 503 aa19.08■□□□□ 0.65
SREBF1-204ENST00000395756 FDXACB1Q9BRP7 624 aaPredicted RBP19.08■□□□□ 0.65
SREBF1-204ENST00000395756 LCTP09848 1927 aa19.08■□□□□ 0.64
SREBF1-204ENST00000395756 RARAP10276 462 aa19.08■□□□□ 0.64
SREBF1-204ENST00000395756 FGFR4P22455 802 aa19.08■□□□□ 0.64
SREBF1-204ENST00000395756 HPDP32754 393 aaPredicted RBP19.08■□□□□ 0.64
SREBF1-204ENST00000395756 CDH8P55286 799 aa19.08■□□□□ 0.64
SREBF1-204ENST00000395756 RWDD2BP57060 319 aa19.08■□□□□ 0.64
SREBF1-204ENST00000395756 ZSCAN26Q16670 478 aa19.08■□□□□ 0.64
SREBF1-204ENST00000395756 ALS2CLQ60I27 953 aa19.08■□□□□ 0.64
SREBF1-204ENST00000395756 LEKR1Q6ZMV7 388 aa19.08■□□□□ 0.64
SREBF1-204ENST00000395756 FAM43BQ6ZT52 329 aaPredicted RBP19.08■□□□□ 0.64
SREBF1-204ENST00000395756 JAMLQ86YT9 394 aa19.08■□□□□ 0.64
SREBF1-204ENST00000395756 WNT8AQ9H1J5 351 aa19.08■□□□□ 0.64
SREBF1-204ENST00000395756 UVRAGQ9P2Y5 699 aa19.08■□□□□ 0.64
SREBF1-204ENST00000395756 MROH7Q68CQ1 1323 aa19.07■□□□□ 0.64
SREBF1-204ENST00000395756 CCL15-CCL14A0A0B4J2E2 113 aa19.07■□□□□ 0.64
SREBF1-204ENST00000395756 OGTO15294 1046 aa19.07■□□□□ 0.64
SREBF1-204ENST00000395756 ABCD1P33897 745 aa19.07■□□□□ 0.64
SREBF1-204ENST00000395756 CUL1Q13616 776 aa19.07■□□□□ 0.64
SREBF1-204ENST00000395756 CCL15Q16663 113 aa19.07■□□□□ 0.64
SREBF1-204ENST00000395756 DUOXA2Q1HG44 320 aa19.07■□□□□ 0.64
SREBF1-204ENST00000395756 DPP9Q86TI2 863 aa19.07■□□□□ 0.64
SREBF1-204ENST00000395756 BRSK2Q8IWQ3 736 aa19.07■□□□□ 0.64
SREBF1-204ENST00000395756 ZNF606Q8WXB4 792 aa19.07■□□□□ 0.64
SREBF1-204ENST00000395756 RPS6KC1Q96S38 1066 aa19.07■□□□□ 0.64
SREBF1-204ENST00000395756 POLIQ9UNA4 740 aa19.07■□□□□ 0.64
SREBF1-204ENST00000395756 ATP8B3O60423 1300 aa19.07■□□□□ 0.64
SREBF1-204ENST00000395756 CD19P15391 556 aa19.07■□□□□ 0.64
SREBF1-204ENST00000395756 VPS41P49754 854 aa19.07■□□□□ 0.64
SREBF1-204ENST00000395756 POU5F1Q01860 360 aaKnown RBP19.07■□□□□ 0.64
SREBF1-204ENST00000395756 ZPBP2Q6X784 338 aa19.07■□□□□ 0.64
SREBF1-204ENST00000395756 PCDHA3Q9Y5H8 950 aa19.07■□□□□ 0.64
SREBF1-204ENST00000395756 IVNS1ABPQ9Y6Y0 642 aa19.07■□□□□ 0.64
SREBF1-204ENST00000395756 BTBD19C9JJ37 291 aa19.06■□□□□ 0.64
SREBF1-204ENST00000395756 BPIFB4P59827 614 aa19.06■□□□□ 0.64
SREBF1-204ENST00000395756 PLPPR4Q7Z2D5 763 aa19.06■□□□□ 0.64
SREBF1-204ENST00000395756 SLC13A5Q86YT5 568 aaPredicted RBP19.06■□□□□ 0.64
SREBF1-204ENST00000395756 EFCAB13Q8IY85 973 aa19.06■□□□□ 0.64
SREBF1-204ENST00000395756 ABRAQ8N0Z2 381 aa19.06■□□□□ 0.64
SREBF1-204ENST00000395756 CD101Q93033 1021 aa19.06■□□□□ 0.64
SREBF1-204ENST00000395756 SMIM23A6NLE4 172 aa19.06■□□□□ 0.64
SREBF1-204ENST00000395756 HADHBP55084 474 aaKnown RBP19.06■□□□□ 0.64
SREBF1-204ENST00000395756 RPL7AP62424 266 aaKnown RBP19.06■□□□□ 0.64
SREBF1-204ENST00000395756 UAP1Q16222 522 aaPredicted RBP19.06■□□□□ 0.64
SREBF1-204ENST00000395756 ATP13A4Q4VNC1 1196 aa19.06■□□□□ 0.64
SREBF1-204ENST00000395756 EGFL6Q8IUX8 553 aa19.06■□□□□ 0.64
SREBF1-204ENST00000395756 C1orf131Q8NDD1 294 aaKnown RBP19.06■□□□□ 0.64
SREBF1-204ENST00000395756 ACSF2Q96CM8 615 aaPredicted RBP19.06■□□□□ 0.64
SREBF1-204ENST00000395756 ERP44Q9BS26 406 aa19.06■□□□□ 0.64
SREBF1-204ENST00000395756 CCDC113Q9H0I3 377 aa19.06■□□□□ 0.64
SREBF1-204ENST00000395756 LRRC4CQ9HCJ2 640 aa19.06■□□□□ 0.64
SREBF1-204ENST00000395756 CISHQ9NSE2 258 aa19.06■□□□□ 0.64
SREBF1-204ENST00000395756 ERAP1Q9NZ08 941 aa19.06■□□□□ 0.64
SREBF1-204ENST00000395756 MCM3APO60318 1980 aa19.06■□□□□ 0.64
SREBF1-204ENST00000395756 WDR81Q562E7 1941 aa19.06■□□□□ 0.64
SREBF1-204ENST00000395756 PPFIA1Q13136 1202 aa19.06■□□□□ 0.64
SREBF1-204ENST00000395756 KCNV1Q6PIU1 500 aa19.06■□□□□ 0.64
SREBF1-204ENST00000395756 FBXO25Q8TCJ0 367 aa19.06■□□□□ 0.64
SREBF1-204ENST00000395756 TTC7AQ9ULT0 858 aaPredicted RBP19.06■□□□□ 0.64
SREBF1-204ENST00000395756 DIS3Q9Y2L1 958 aaKnown RBP19.06■□□□□ 0.64
SREBF1-204ENST00000395756 KIAA0391O15091 583 aaKnown RBP19.05■□□□□ 0.64
SREBF1-204ENST00000395756 TLR3O15455 904 aaKnown RBP19.05■□□□□ 0.64
SREBF1-204ENST00000395756 ZEB2O60315 1214 aa19.05■□□□□ 0.64
SREBF1-204ENST00000395756 FAM189A1O60320 539 aa19.05■□□□□ 0.64
SREBF1-204ENST00000395756 HBP1O60381 514 aa19.05■□□□□ 0.64
SREBF1-204ENST00000395756 LGR5O75473 907 aa19.05■□□□□ 0.64
SREBF1-204ENST00000395756 LGALS2P05162 132 aa19.05■□□□□ 0.64
SREBF1-204ENST00000395756 ZNF699Q32M78 642 aa19.05■□□□□ 0.64
SREBF1-204ENST00000395756 WDR72Q3MJ13 1102 aa19.05■□□□□ 0.64
SREBF1-204ENST00000395756 CCDC25Q86WR0 208 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms