RNA–Protein interactions for RNA: ENST00000395363.5

HLA-DQA1-203, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,206 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-203ENST00000395363 LINC00301Q8NCQ3 95 aa12.64□□□□□ -0.39
HLA-DQA1-203ENST00000395363 NOC3LQ8WTT2 800 aaKnown RBP12.64□□□□□ -0.39
HLA-DQA1-203ENST00000395363 SNX21Q969T3 373 aa12.64□□□□□ -0.39
HLA-DQA1-203ENST00000395363 SAAL1Q96ER3 474 aa12.64□□□□□ -0.39
HLA-DQA1-203ENST00000395363 UROC1Q96N76 676 aa12.64□□□□□ -0.39
HLA-DQA1-203ENST00000395363 TMEM209Q96SK2 561 aa12.64□□□□□ -0.39
HLA-DQA1-203ENST00000395363 PLEKHA4Q9H4M7 779 aa12.64□□□□□ -0.39
HLA-DQA1-203ENST00000395363 FBXL5Q9UKA1 691 aa12.64□□□□□ -0.39
HLA-DQA1-203ENST00000395363 USTQ9Y2C2 406 aa12.64□□□□□ -0.39
HLA-DQA1-203ENST00000395363 NUB1Q9Y5A7 615 aa12.64□□□□□ -0.39
HLA-DQA1-203ENST00000395363 PATJQ8NI35 1801 aa12.64□□□□□ -0.39
HLA-DQA1-203ENST00000395363 CFAP54Q96N23 3096 aa12.64□□□□□ -0.39
HLA-DQA1-203ENST00000395363 ANAPC1Q9H1A4 1944 aa12.64□□□□□ -0.39
HLA-DQA1-203ENST00000395363 RIF1Q5UIP0 2472 aaKnown RBP12.64□□□□□ -0.39
HLA-DQA1-203ENST00000395363 FRYLO94915 3013 aa12.63□□□□□ -0.39
HLA-DQA1-203ENST00000395363 A0A0B4J269 797 aa12.63□□□□□ -0.39
HLA-DQA1-203ENST00000395363 GOLGA8IPA6NC78 632 aa12.63□□□□□ -0.39
HLA-DQA1-203ENST00000395363 GOLGA8JA6NMD2 632 aa12.63□□□□□ -0.39
HLA-DQA1-203ENST00000395363 SPTLC1O15269 473 aa12.63□□□□□ -0.39
HLA-DQA1-203ENST00000395363 SLC26A4O43511 780 aa12.63□□□□□ -0.39
HLA-DQA1-203ENST00000395363 PPP1R37O75864 691 aa12.63□□□□□ -0.39
HLA-DQA1-203ENST00000395363 VNN2O95498 520 aa12.63□□□□□ -0.39
HLA-DQA1-203ENST00000395363 PIGRP01833 764 aa12.63□□□□□ -0.39
HLA-DQA1-203ENST00000395363 CLTAP09496 248 aa12.63□□□□□ -0.39
HLA-DQA1-203ENST00000395363 ADSSP30520 456 aa12.63□□□□□ -0.39
HLA-DQA1-203ENST00000395363 GTF2BQ00403 316 aa12.63□□□□□ -0.39
HLA-DQA1-203ENST00000395363 PPP2R3AQ06190 1150 aa12.63□□□□□ -0.39
HLA-DQA1-203ENST00000395363 ELAVL2Q12926 359 aaKnown RBP12.63□□□□□ -0.39
HLA-DQA1-203ENST00000395363 RAB33AQ14088 237 aa12.63□□□□□ -0.39
HLA-DQA1-203ENST00000395363 EFCAB13Q8IY85 973 aa12.63□□□□□ -0.39
HLA-DQA1-203ENST00000395363 TTC9BQ8N6N2 239 aa12.63□□□□□ -0.39
HLA-DQA1-203ENST00000395363 TMEM105Q8N8V8 129 aa12.63□□□□□ -0.39
HLA-DQA1-203ENST00000395363 ACSF2Q96CM8 615 aaPredicted RBP12.63□□□□□ -0.39
HLA-DQA1-203ENST00000395363 TCEAL4Q96EI5 215 aa12.63□□□□□ -0.39
HLA-DQA1-203ENST00000395363 CRISPLD1Q9H336 500 aa12.63□□□□□ -0.39
HLA-DQA1-203ENST00000395363 RPF1Q9H9Y2 349 aaKnown RBP12.63□□□□□ -0.39
HLA-DQA1-203ENST00000395363 SLC38A7Q9NVC3 462 aa12.63□□□□□ -0.39
HLA-DQA1-203ENST00000395363 ZDHHC7Q9NXF8 308 aa12.63□□□□□ -0.39
HLA-DQA1-203ENST00000395363 DNMT3BQ9UBC3 853 aaKnown RBP12.63□□□□□ -0.39
HLA-DQA1-203ENST00000395363 STK17AQ9UEE5 414 aa12.63□□□□□ -0.39
HLA-DQA1-203ENST00000395363 CCDC39Q9UFE4 941 aa12.63□□□□□ -0.39
HLA-DQA1-203ENST00000395363 CPSF3Q9UKF6 684 aaKnown RBP12.63□□□□□ -0.39
HLA-DQA1-203ENST00000395363 SPTBN4Q9H254 2564 aa12.62□□□□□ -0.39
HLA-DQA1-203ENST00000395363 SPTLC2O15270 562 aa12.62□□□□□ -0.39
HLA-DQA1-203ENST00000395363 PI15O43692 258 aa12.62□□□□□ -0.39
HLA-DQA1-203ENST00000395363 TBC1D4O60343 1298 aa12.62□□□□□ -0.39
HLA-DQA1-203ENST00000395363 SOAT2O75908 522 aa12.62□□□□□ -0.39
HLA-DQA1-203ENST00000395363 PRPF6O94906 941 aaKnown RBP12.62□□□□□ -0.39
HLA-DQA1-203ENST00000395363 GCNT3O95395 438 aa12.62□□□□□ -0.39
HLA-DQA1-203ENST00000395363 CEBPBP17676 345 aa12.62□□□□□ -0.39
HLA-DQA1-203ENST00000395363 FSHRP23945 695 aa12.62□□□□□ -0.39
HLA-DQA1-203ENST00000395363 NHLH1Q02575 133 aa12.62□□□□□ -0.39
HLA-DQA1-203ENST00000395363 CREMQ03060 361 aa12.62□□□□□ -0.39
HLA-DQA1-203ENST00000395363 TCF15Q12870 199 aa12.62□□□□□ -0.39
HLA-DQA1-203ENST00000395363 ZBTB6Q15916 424 aa12.62□□□□□ -0.39
HLA-DQA1-203ENST00000395363 CTXN3Q4LDR2 81 aa12.62□□□□□ -0.39
HLA-DQA1-203ENST00000395363 CWF19L1Q69YN2 538 aaKnown RBP12.62□□□□□ -0.39
HLA-DQA1-203ENST00000395363 ADALQ6DHV7 355 aa12.62□□□□□ -0.39
HLA-DQA1-203ENST00000395363 SHC4Q6S5L8 630 aa12.62□□□□□ -0.39
HLA-DQA1-203ENST00000395363 PARM1Q6UWI2 310 aa12.62□□□□□ -0.39
HLA-DQA1-203ENST00000395363 CRELD2Q6UXH1 353 aaPredicted RBP12.62□□□□□ -0.39
HLA-DQA1-203ENST00000395363 SV2BQ7L1I2 683 aa12.62□□□□□ -0.39
HLA-DQA1-203ENST00000395363 ZNF720Q7Z2F6 126 aa12.62□□□□□ -0.39
HLA-DQA1-203ENST00000395363 SUGP1Q8IWZ8 645 aaKnown RBP12.62□□□□□ -0.39
HLA-DQA1-203ENST00000395363 GRAMD1CQ8IYS0 662 aa12.62□□□□□ -0.39
HLA-DQA1-203ENST00000395363 FLCNQ8NFG4 579 aa12.62□□□□□ -0.39
HLA-DQA1-203ENST00000395363 FGF14Q92915 247 aa12.62□□□□□ -0.39
HLA-DQA1-203ENST00000395363 DHX58Q96C10 678 aa12.62□□□□□ -0.39
HLA-DQA1-203ENST00000395363 SUSD3Q96L08 255 aa12.62□□□□□ -0.39
HLA-DQA1-203ENST00000395363 MFSD14AQ96MC6 490 aa12.62□□□□□ -0.39
HLA-DQA1-203ENST00000395363 PGLYRP2Q96PD5 576 aa12.62□□□□□ -0.39
HLA-DQA1-203ENST00000395363 PCIF1Q9H4Z3 704 aa12.62□□□□□ -0.39
HLA-DQA1-203ENST00000395363 MRPL44Q9H9J2 332 aaKnown RBP12.62□□□□□ -0.39
HLA-DQA1-203ENST00000395363 CA14Q9ULX7 337 aa12.62□□□□□ -0.39
HLA-DQA1-203ENST00000395363 NUMBLQ9Y6R0 609 aa12.62□□□□□ -0.39
HLA-DQA1-203ENST00000395363 FANCMQ8IYD8 2048 aa12.62□□□□□ -0.39
HLA-DQA1-203ENST00000395363 FAM186AA6NE01 2351 aa12.61□□□□□ -0.39
HLA-DQA1-203ENST00000395363 F13A1P00488 732 aa12.61□□□□□ -0.39
HLA-DQA1-203ENST00000395363 HSP90AA1P07900 732 aaKnown RBP12.61□□□□□ -0.39
HLA-DQA1-203ENST00000395363 ZSCAN22P10073 491 aaPredicted RBP12.61□□□□□ -0.39
HLA-DQA1-203ENST00000395363 LAMP2P13473 410 aa12.61□□□□□ -0.39
HLA-DQA1-203ENST00000395363 GJA1P17302 382 aa12.61□□□□□ -0.39
HLA-DQA1-203ENST00000395363 TXLNAP40222 546 aa12.61□□□□□ -0.39
HLA-DQA1-203ENST00000395363 CCR2P41597 374 aa12.61□□□□□ -0.39
HLA-DQA1-203ENST00000395363 DNM1Q05193 864 aaKnown RBP12.61□□□□□ -0.39
HLA-DQA1-203ENST00000395363 TDGQ13569 410 aa12.61□□□□□ -0.39
HLA-DQA1-203ENST00000395363 HTR4Q13639 388 aa12.61□□□□□ -0.39
HLA-DQA1-203ENST00000395363 E2F4Q16254 413 aa12.61□□□□□ -0.39
HLA-DQA1-203ENST00000395363 LMBRD2Q68DH5 695 aaPredicted RBP12.61□□□□□ -0.39
HLA-DQA1-203ENST00000395363 RNF19BQ6ZMZ0 732 aa12.61□□□□□ -0.39
HLA-DQA1-203ENST00000395363 ANKS3Q6ZW76 656 aa12.61□□□□□ -0.39
HLA-DQA1-203ENST00000395363 BMP8AQ7Z5Y6 402 aa12.61□□□□□ -0.39
HLA-DQA1-203ENST00000395363 GPR65Q8IYL9 337 aa12.61□□□□□ -0.39
HLA-DQA1-203ENST00000395363 HS6ST3Q8IZP7 471 aa12.61□□□□□ -0.39
HLA-DQA1-203ENST00000395363 SIX5Q8N196 739 aa12.61□□□□□ -0.39
HLA-DQA1-203ENST00000395363 PLCD3Q8N3E9 789 aa12.61□□□□□ -0.39
HLA-DQA1-203ENST00000395363 KCTD17Q8N5Z5 321 aa12.61□□□□□ -0.39
HLA-DQA1-203ENST00000395363 HDAC7Q8WUI4 952 aa12.61□□□□□ -0.39
HLA-DQA1-203ENST00000395363 POMGNT1Q8WZA1 660 aa12.61□□□□□ -0.39
HLA-DQA1-203ENST00000395363 KXD1Q9BQD3 176 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms