RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 TMEM174Q8WUU8 243 aa21.54■■□□□ 1.04
SNCA-203ENST00000394986 MFSD14AQ96MC6 490 aa21.54■■□□□ 1.04
SNCA-203ENST00000394986 GTPBP4Q9BZE4 634 aaKnown RBP21.54■■□□□ 1.04
SNCA-203ENST00000394986 INTS13Q9NVM9 706 aa21.54■■□□□ 1.04
SNCA-203ENST00000394986 CLDND1Q9NY35 253 aa21.54■■□□□ 1.04
SNCA-203ENST00000394986 PRUNE2Q8WUY3 3088 aa21.54■■□□□ 1.04
SNCA-203ENST00000394986 PPP1R3GB7ZBB8 358 aa21.53■■□□□ 1.04
SNCA-203ENST00000394986 PIRO00625 290 aa21.53■■□□□ 1.04
SNCA-203ENST00000394986 SPTLC1O15269 473 aa21.53■■□□□ 1.04
SNCA-203ENST00000394986 CLASP2O75122 1294 aaKnown RBP21.53■■□□□ 1.04
SNCA-203ENST00000394986 AKAP3O75969 853 aa21.53■■□□□ 1.04
SNCA-203ENST00000394986 GLP2RO95838 553 aa21.53■■□□□ 1.04
SNCA-203ENST00000394986 ITGB3P05106 788 aa21.53■■□□□ 1.04
SNCA-203ENST00000394986 CNPP09543 421 aaKnown RBP21.53■■□□□ 1.04
SNCA-203ENST00000394986 TMEM191BP0C7N4 346 aa21.53■■□□□ 1.04
SNCA-203ENST00000394986 POLR2BP30876 1174 aaKnown RBP21.53■■□□□ 1.04
SNCA-203ENST00000394986 ELAVL2Q12926 359 aaKnown RBP21.53■■□□□ 1.04
SNCA-203ENST00000394986 MYBPC2Q14324 1141 aa21.53■■□□□ 1.04
SNCA-203ENST00000394986 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.53■■□□□ 1.04
SNCA-203ENST00000394986 WDR49Q8IV35 697 aa21.53■■□□□ 1.04
SNCA-203ENST00000394986 KLHL5Q96PQ7 755 aa21.53■■□□□ 1.04
SNCA-203ENST00000394986 FNBP1Q96RU3 617 aa21.53■■□□□ 1.04
SNCA-203ENST00000394986 CGRRF1Q99675 332 aa21.53■■□□□ 1.04
SNCA-203ENST00000394986 CTNND2Q9UQB3 1225 aa21.53■■□□□ 1.04
SNCA-203ENST00000394986 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.53■■□□□ 1.04
SNCA-203ENST00000394986 SPTBN5Q9NRC6 3674 aaKnown RBP21.52■■□□□ 1.04
SNCA-203ENST00000394986 PSMA7O14818 248 aa21.52■■□□□ 1.04
SNCA-203ENST00000394986 TRAPPC3O43617 180 aa21.52■■□□□ 1.04
SNCA-203ENST00000394986 TNNI1P19237 187 aa21.52■■□□□ 1.04
SNCA-203ENST00000394986 FGFR3P22607 806 aa21.52■■□□□ 1.04
SNCA-203ENST00000394986 TFF2Q03403 129 aa21.52■■□□□ 1.04
SNCA-203ENST00000394986 DLX2Q07687 328 aaPredicted RBP21.52■■□□□ 1.04
SNCA-203ENST00000394986 ADAM9Q13443 819 aa21.52■■□□□ 1.04
SNCA-203ENST00000394986 STIM1Q13586 685 aa21.52■■□□□ 1.04
SNCA-203ENST00000394986 SURF1Q15526 300 aa21.52■■□□□ 1.04
SNCA-203ENST00000394986 EDRF1Q3B7T1 1238 aa21.52■■□□□ 1.04
SNCA-203ENST00000394986 GLYCTKQ8IVS8 523 aa21.52■■□□□ 1.04
SNCA-203ENST00000394986 EFHBQ8N7U6 833 aa21.52■■□□□ 1.04
SNCA-203ENST00000394986 CXorf38Q8TB03 319 aa21.52■■□□□ 1.04
SNCA-203ENST00000394986 CACTINQ8WUQ7 758 aaKnown RBP21.52■■□□□ 1.04
SNCA-203ENST00000394986 ANKRD36BP1Q96IX9 119 aa21.52■■□□□ 1.04
SNCA-203ENST00000394986 SUSD3Q96L08 255 aa21.52■■□□□ 1.04
SNCA-203ENST00000394986 TSG101Q99816 390 aa21.52■■□□□ 1.04
SNCA-203ENST00000394986 UBE2ZQ9H832 354 aaPredicted RBP21.52■■□□□ 1.04
SNCA-203ENST00000394986 SIX4Q9UIU6 781 aa21.52■■□□□ 1.04
SNCA-203ENST00000394986 FRMD4BQ9Y2L6 1034 aa21.52■■□□□ 1.04
SNCA-203ENST00000394986 LRRIQ3A6PVS8 624 aaPredicted RBP21.51■■□□□ 1.03
SNCA-203ENST00000394986 TEX28O15482 410 aa21.51■■□□□ 1.03
SNCA-203ENST00000394986 TBX10O75333 385 aa21.51■■□□□ 1.03
SNCA-203ENST00000394986 KRT19P08727 400 aa21.51■■□□□ 1.03
SNCA-203ENST00000394986 CCNE1P24864 410 aa21.51■■□□□ 1.03
SNCA-203ENST00000394986 DLG4P78352 724 aa21.51■■□□□ 1.03
SNCA-203ENST00000394986 ADAM15Q13444 863 aa21.51■■□□□ 1.03
SNCA-203ENST00000394986 COL19A1Q14993 1142 aa21.51■■□□□ 1.03
SNCA-203ENST00000394986 CTC1Q2NKJ3 1217 aa21.51■■□□□ 1.03
SNCA-203ENST00000394986 CSGALNACT2Q8N6G5 542 aa21.51■■□□□ 1.03
SNCA-203ENST00000394986 TRIML1Q8N9V2 468 aa21.51■■□□□ 1.03
SNCA-203ENST00000394986 LNX1Q8TBB1 728 aaPredicted RBP21.51■■□□□ 1.03
SNCA-203ENST00000394986 PARD3BQ8TEW8 1205 aa21.51■■□□□ 1.03
SNCA-203ENST00000394986 NELFBQ8WX92 580 aa21.51■■□□□ 1.03
SNCA-203ENST00000394986 PIK3R5Q8WYR1 880 aa21.51■■□□□ 1.03
SNCA-203ENST00000394986 ZNF516Q92618 1163 aa21.51■■□□□ 1.03
SNCA-203ENST00000394986 HLA-CQ95604 372 aa21.51■■□□□ 1.03
SNCA-203ENST00000394986 PABPC5Q96DU9 382 aaKnown RBP21.51■■□□□ 1.03
SNCA-203ENST00000394986 CDCA3Q99618 268 aaPredicted RBP21.51■■□□□ 1.03
SNCA-203ENST00000394986 EMILIN2Q9BXX0 1053 aa21.51■■□□□ 1.03
SNCA-203ENST00000394986 RXFP1Q9HBX9 757 aa21.51■■□□□ 1.03
SNCA-203ENST00000394986 AGAP1Q9UPQ3 857 aa21.51■■□□□ 1.03
SNCA-203ENST00000394986 TIMM13Q9Y5L4 95 aaPredicted RBP21.51■■□□□ 1.03
SNCA-203ENST00000394986 TNNC2P02585 160 aa21.5■■□□□ 1.03
SNCA-203ENST00000394986 RPL13P26373 211 aaKnown RBP21.5■■□□□ 1.03
SNCA-203ENST00000394986 LTBRP36941 435 aa21.5■■□□□ 1.03
SNCA-203ENST00000394986 AARSP49588 968 aaKnown RBP eCLIP21.5■■□□□ 1.03
SNCA-203ENST00000394986 STX17P56962 302 aa21.5■■□□□ 1.03
SNCA-203ENST00000394986 LILRA4P59901 499 aa21.5■■□□□ 1.03
SNCA-203ENST00000394986 PSMD5Q16401 504 aa21.5■■□□□ 1.03
SNCA-203ENST00000394986 DUOXA2Q1HG44 320 aa21.5■■□□□ 1.03
SNCA-203ENST00000394986 DHTKD1Q96HY7 919 aaPredicted RBP21.5■■□□□ 1.03
SNCA-203ENST00000394986 ITGA11Q9UKX5 1188 aa21.5■■□□□ 1.03
SNCA-203ENST00000394986 BARX2Q9UMQ3 279 aaPredicted RBP21.5■■□□□ 1.03
SNCA-203ENST00000394986 HCFC2Q9Y5Z7 792 aa21.5■■□□□ 1.03
SNCA-203ENST00000394986 H3BQ06 376 aaPredicted RBP21.49■■□□□ 1.03
SNCA-203ENST00000394986 ADAM12O43184 909 aa21.49■■□□□ 1.03
SNCA-203ENST00000394986 KCNA5P22460 613 aa21.49■■□□□ 1.03
SNCA-203ENST00000394986 KLRC2P26717 231 aa21.49■■□□□ 1.03
SNCA-203ENST00000394986 NDUFV1P49821 464 aa21.49■■□□□ 1.03
SNCA-203ENST00000394986 TAF6P49848 677 aa21.49■■□□□ 1.03
SNCA-203ENST00000394986 KCNC3Q14003 757 aa21.49■■□□□ 1.03
SNCA-203ENST00000394986 DSTYKQ6XUX3 929 aa21.49■■□□□ 1.03
SNCA-203ENST00000394986 FAM186BQ8IYM0 893 aa21.49■■□□□ 1.03
SNCA-203ENST00000394986 THEGQ9P2T0 379 aa21.49■■□□□ 1.03
SNCA-203ENST00000394986 PCDHB8Q9UN66 801 aa21.49■■□□□ 1.03
SNCA-203ENST00000394986 SSX2IPQ9Y2D8 614 aa21.49■■□□□ 1.03
SNCA-203ENST00000394986 XIRP2A4UGR9 3374 aa21.49■■□□□ 1.03
SNCA-203ENST00000394986 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.48■■□□□ 1.03
SNCA-203ENST00000394986 M0QZQ0 153 aa21.48■■□□□ 1.03
SNCA-203ENST00000394986 SYN3O14994 580 aa21.48■■□□□ 1.03
SNCA-203ENST00000394986 MBD3O95983 291 aa21.48■■□□□ 1.03
SNCA-203ENST00000394986 EPCAMP16422 314 aa21.48■■□□□ 1.03
SNCA-203ENST00000394986 PPP1R2P41236 205 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms