RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 C1orf127Q8N9H9 656 aa21.76■■□□□ 1.07
PRKCD-202ENST00000394729 TRPV1Q8NER1 839 aa21.76■■□□□ 1.07
PRKCD-202ENST00000394729 IFT81Q8WYA0 676 aa21.76■■□□□ 1.07
PRKCD-202ENST00000394729 DDX47Q9H0S4 455 aaKnown RBP21.76■■□□□ 1.07
PRKCD-202ENST00000394729 CISHQ9NSE2 258 aa21.76■■□□□ 1.07
PRKCD-202ENST00000394729 CACNG4Q9UBN1 327 aa21.76■■□□□ 1.07
PRKCD-202ENST00000394729 GJD2Q9UKL4 321 aa21.76■■□□□ 1.07
PRKCD-202ENST00000394729 NR2E1Q9Y466 385 aa21.76■■□□□ 1.07
PRKCD-202ENST00000394729 ZSWIM8A7E2V4 1837 aa21.76■■□□□ 1.07
PRKCD-202ENST00000394729 RRP9O43818 475 aaKnown RBP21.76■■□□□ 1.07
PRKCD-202ENST00000394729 RTN2O75298 545 aa21.76■■□□□ 1.07
PRKCD-202ENST00000394729 ACO1P21399 889 aaKnown RBP21.76■■□□□ 1.07
PRKCD-202ENST00000394729 CLDN10P78369 228 aa21.76■■□□□ 1.07
PRKCD-202ENST00000394729 LONRF2Q1L5Z9 754 aa21.76■■□□□ 1.07
PRKCD-202ENST00000394729 WDR49Q8IV35 697 aa21.76■■□□□ 1.07
PRKCD-202ENST00000394729 TRIB2Q92519 343 aa21.76■■□□□ 1.07
PRKCD-202ENST00000394729 ALG3Q92685 438 aa21.76■■□□□ 1.07
PRKCD-202ENST00000394729 ANKRD36BP1Q96IX9 119 aa21.76■■□□□ 1.07
PRKCD-202ENST00000394729 TRIM6Q9C030 488 aaPredicted RBP21.76■■□□□ 1.07
PRKCD-202ENST00000394729 A6NJR5 290 aa21.75■■□□□ 1.07
PRKCD-202ENST00000394729 POLR2BP30876 1174 aaKnown RBP21.75■■□□□ 1.07
PRKCD-202ENST00000394729 ABCD1P33897 745 aa21.75■■□□□ 1.07
PRKCD-202ENST00000394729 FSCN1Q16658 493 aaKnown RBP21.75■■□□□ 1.07
PRKCD-202ENST00000394729 SLC10A6Q3KNW5 377 aa21.75■■□□□ 1.07
PRKCD-202ENST00000394729 MMS22LQ6ZRQ5 1243 aa21.75■■□□□ 1.07
PRKCD-202ENST00000394729 EXOC8Q8IYI6 725 aa21.75■■□□□ 1.07
PRKCD-202ENST00000394729 ZNF564Q8TBZ8 553 aaPredicted RBP21.75■■□□□ 1.07
PRKCD-202ENST00000394729 NXF3Q9H4D5 531 aaKnown RBP21.75■■□□□ 1.07
PRKCD-202ENST00000394729 PIN4Q9Y237 131 aaKnown RBP21.75■■□□□ 1.07
PRKCD-202ENST00000394729 TNFSF13BQ9Y275 285 aa21.75■■□□□ 1.07
PRKCD-202ENST00000394729 USTQ9Y2C2 406 aa21.75■■□□□ 1.07
PRKCD-202ENST00000394729 SPOPO43791 374 aa21.75■■□□□ 1.07
PRKCD-202ENST00000394729 COMTP21964 271 aa21.75■■□□□ 1.07
PRKCD-202ENST00000394729 TUBB2AQ13885 445 aa21.75■■□□□ 1.07
PRKCD-202ENST00000394729 EMID1Q96A84 441 aaPredicted RBP21.75■■□□□ 1.07
PRKCD-202ENST00000394729 TUBB2BQ9BVA1 445 aa21.75■■□□□ 1.07
PRKCD-202ENST00000394729 SMYD3Q9H7B4 428 aa21.75■■□□□ 1.07
PRKCD-202ENST00000394729 ANAPC7Q9UJX3 599 aa21.75■■□□□ 1.07
PRKCD-202ENST00000394729 FGGP02679 453 aa21.75■■□□□ 1.07
PRKCD-202ENST00000394729 PROZP22891 400 aa21.75■■□□□ 1.07
PRKCD-202ENST00000394729 FAM193AP78312 1265 aa21.75■■□□□ 1.07
PRKCD-202ENST00000394729 IFI16Q16666 785 aaKnown RBP21.75■■□□□ 1.07
PRKCD-202ENST00000394729 KIF12Q96FN5 646 aa21.75■■□□□ 1.07
PRKCD-202ENST00000394729 TRIM31Q9BZY9 425 aa21.75■■□□□ 1.07
PRKCD-202ENST00000394729 SIX4Q9UIU6 781 aa21.75■■□□□ 1.07
PRKCD-202ENST00000394729 AGAP1Q9UPQ3 857 aa21.75■■□□□ 1.07
PRKCD-202ENST00000394729 PCDHB2Q9Y5E7 798 aa21.75■■□□□ 1.07
PRKCD-202ENST00000394729 ASAP2O43150 1006 aa21.74■■□□□ 1.07
PRKCD-202ENST00000394729 ASS1P00966 412 aaKnown RBP21.74■■□□□ 1.07
PRKCD-202ENST00000394729 NSFP46459 744 aaKnown RBP21.74■■□□□ 1.07
PRKCD-202ENST00000394729 NFX1Q12986 1120 aaKnown RBP21.74■■□□□ 1.07
PRKCD-202ENST00000394729 C8orf74Q6P047 294 aa21.74■■□□□ 1.07
PRKCD-202ENST00000394729 C7orf31Q8N865 590 aa21.74■■□□□ 1.07
PRKCD-202ENST00000394729 ISCUQ9H1K1 167 aa21.74■■□□□ 1.07
PRKCD-202ENST00000394729 MGAMO43451 1857 aa21.74■■□□□ 1.07
PRKCD-202ENST00000394729 PPEF2O14830 753 aa21.74■■□□□ 1.07
PRKCD-202ENST00000394729 CYP4A22Q5TCH4 519 aa21.74■■□□□ 1.07
PRKCD-202ENST00000394729 DCAF12L1Q5VU92 463 aa21.74■■□□□ 1.07
PRKCD-202ENST00000394729 VTI1AQ96AJ9 217 aa21.74■■□□□ 1.07
PRKCD-202ENST00000394729 APBA2Q99767 749 aa21.74■■□□□ 1.07
PRKCD-202ENST00000394729 CCDC94Q9BW85 323 aaPredicted RBP21.74■■□□□ 1.07
PRKCD-202ENST00000394729 TJP2Q9UDY2 1190 aa21.74■■□□□ 1.07
PRKCD-202ENST00000394729 NOC2LQ9Y3T9 749 aaKnown RBP21.74■■□□□ 1.07
PRKCD-202ENST00000394729 TRPA1O75762 1119 aa21.73■■□□□ 1.07
PRKCD-202ENST00000394729 F2P00734 622 aa21.73■■□□□ 1.07
PRKCD-202ENST00000394729 PSEN2P49810 448 aa21.73■■□□□ 1.07
PRKCD-202ENST00000394729 C1orf131Q8NDD1 294 aaKnown RBP21.73■■□□□ 1.07
PRKCD-202ENST00000394729 C18orf25Q96B23 403 aaPredicted RBP21.73■■□□□ 1.07
PRKCD-202ENST00000394729 ZSWIM1Q9BR11 485 aa21.73■■□□□ 1.07
PRKCD-202ENST00000394729 ADPGKQ9BRR6 497 aa21.73■■□□□ 1.07
PRKCD-202ENST00000394729 GOLGA2P5Q9HBQ8 144 aa21.73■■□□□ 1.07
PRKCD-202ENST00000394729 KLHL11Q9NVR0 708 aa21.73■■□□□ 1.07
PRKCD-202ENST00000394729 O00370 1275 aa21.73■■□□□ 1.07
PRKCD-202ENST00000394729 PMM2O15305 246 aa21.73■■□□□ 1.07
PRKCD-202ENST00000394729 ZFYVE27Q5T4F4 411 aa21.73■■□□□ 1.07
PRKCD-202ENST00000394729 ZNF606Q8WXB4 792 aa21.73■■□□□ 1.07
PRKCD-202ENST00000394729 TFAP2BQ92481 460 aa21.73■■□□□ 1.07
PRKCD-202ENST00000394729 KIAA0391O15091 583 aaKnown RBP21.72■■□□□ 1.07
PRKCD-202ENST00000394729 SCP2P22307 547 aa21.72■■□□□ 1.07
PRKCD-202ENST00000394729 LINC01465Q8N7H1 131 aa21.72■■□□□ 1.07
PRKCD-202ENST00000394729 CELF4Q9BZC1 486 aaKnown RBP21.72■■□□□ 1.07
PRKCD-202ENST00000394729 RNF39Q9H2S5 420 aa21.72■■□□□ 1.07
PRKCD-202ENST00000394729 ZCCHC17Q9NP64 241 aaKnown RBP21.72■■□□□ 1.07
PRKCD-202ENST00000394729 TLL2Q9Y6L7 1015 aa21.72■■□□□ 1.07
PRKCD-202ENST00000394729 TRIP11Q15643 1979 aa21.72■■□□□ 1.07
PRKCD-202ENST00000394729 LOC102724159A0A0B4J2E5 919 aa21.72■■□□□ 1.07
PRKCD-202ENST00000394729 KRIT1O00522 736 aa21.72■■□□□ 1.07
PRKCD-202ENST00000394729 POLR3GO15318 223 aaPredicted RBP21.72■■□□□ 1.07
PRKCD-202ENST00000394729 GUCY2DQ02846 1103 aa21.72■■□□□ 1.07
PRKCD-202ENST00000394729 PWP2Q15269 919 aaKnown RBP21.72■■□□□ 1.07
PRKCD-202ENST00000394729 CLEC16AQ2KHT3 1053 aa21.72■■□□□ 1.07
PRKCD-202ENST00000394729 ACAP3Q96P50 834 aa21.72■■□□□ 1.07
PRKCD-202ENST00000394729 TWNKQ96RR1 684 aa21.72■■□□□ 1.07
PRKCD-202ENST00000394729 HCRTO43612 131 aa21.71■■□□□ 1.07
PRKCD-202ENST00000394729 GLI1P08151 1106 aa21.71■■□□□ 1.07
PRKCD-202ENST00000394729 ACAD10Q6JQN1 1059 aa21.71■■□□□ 1.07
PRKCD-202ENST00000394729 DDX42Q86XP3 938 aaKnown RBP eCLIP21.71■■□□□ 1.07
PRKCD-202ENST00000394729 FAM118BQ9BPY3 351 aa21.71■■□□□ 1.07
PRKCD-202ENST00000394729 LPIN3Q9BQK8 851 aa21.71■■□□□ 1.07
PRKCD-202ENST00000394729 NIF3L1Q9GZT8 377 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms