RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 FDXACB1Q9BRP7 624 aaPredicted RBP7.49□□□□□ -1.21
RTN4-205ENST00000394609 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.49□□□□□ -1.21
RTN4-205ENST00000394609 LACRTQ9GZZ8 138 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 FAM49AQ9H0Q0 323 aaPredicted RBP7.49□□□□□ -1.21
RTN4-205ENST00000394609 ACBD3Q9H3P7 528 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 HAUS4Q9H6D7 363 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 IFT122Q9HBG6 1241 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 UBE2TQ9NPD8 197 aaPredicted RBP7.49□□□□□ -1.21
RTN4-205ENST00000394609 MED4Q9NPJ6 270 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 RBAKQ9NYW8 714 aaPredicted RBP7.49□□□□□ -1.21
RTN4-205ENST00000394609 APEX2Q9UBZ4 518 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 CDV3Q9UKY7 258 aaKnown RBP7.49□□□□□ -1.21
RTN4-205ENST00000394609 GUCA1BQ9UMX6 200 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 DUSP10Q9Y6W6 482 aa7.49□□□□□ -1.21
RTN4-205ENST00000394609 PLXNA1Q9UIW2 1896 aa7.48□□□□□ -1.21
RTN4-205ENST00000394609 WDR81Q562E7 1941 aa7.48□□□□□ -1.21
RTN4-205ENST00000394609 FAM170AA1A519 330 aa7.48□□□□□ -1.21
RTN4-205ENST00000394609 ASAP2O43150 1006 aa7.48□□□□□ -1.21
RTN4-205ENST00000394609 KIF5CO60282 957 aa7.48□□□□□ -1.21
RTN4-205ENST00000394609 TOM1L1O75674 476 aa7.48□□□□□ -1.21
RTN4-205ENST00000394609 TRPA1O75762 1119 aa7.48□□□□□ -1.21
RTN4-205ENST00000394609 URI1O94763 535 aaPredicted RBP7.48□□□□□ -1.21
RTN4-205ENST00000394609 GFPT2O94808 682 aa7.48□□□□□ -1.21
RTN4-205ENST00000394609 F2P00734 622 aa7.48□□□□□ -1.21
RTN4-205ENST00000394609 SMIM10L2AP0DMW4 78 aa7.48□□□□□ -1.21
RTN4-205ENST00000394609 SMIM10L2BP0DMW5 78 aa7.48□□□□□ -1.21
RTN4-205ENST00000394609 TNNI1P19237 187 aa7.48□□□□□ -1.21
RTN4-205ENST00000394609 TNFSF9P41273 254 aa7.48□□□□□ -1.21
RTN4-205ENST00000394609 JAM2P57087 298 aa7.48□□□□□ -1.21
RTN4-205ENST00000394609 OSTNP61366 133 aa7.48□□□□□ -1.21
RTN4-205ENST00000394609 KRT83P78385 493 aa7.48□□□□□ -1.21
RTN4-205ENST00000394609 HTRA3P83110 453 aa7.48□□□□□ -1.21
RTN4-205ENST00000394609 ZNF200P98182 395 aaPredicted RBP7.48□□□□□ -1.21
RTN4-205ENST00000394609 PTK2Q05397 1052 aa7.48□□□□□ -1.21
RTN4-205ENST00000394609 MBTD1Q05BQ5 628 aa7.48□□□□□ -1.21
RTN4-205ENST00000394609 PRPF4BQ13523 1007 aaKnown RBP7.48□□□□□ -1.21
RTN4-205ENST00000394609 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.48□□□□□ -1.211e-6■□□□□ 10.6
RTN4-205ENST00000394609 EPC2Q52LR7 807 aa7.48□□□□□ -1.21
RTN4-205ENST00000394609 ZNF569Q5MCW4 686 aa7.48□□□□□ -1.21
RTN4-205ENST00000394609 CCDC122Q5T0U0 273 aa7.48□□□□□ -1.21
RTN4-205ENST00000394609 ATF7IP2Q5U623 682 aa7.48□□□□□ -1.21
RTN4-205ENST00000394609 KRT39Q6A163 491 aa7.48□□□□□ -1.21
RTN4-205ENST00000394609 NFRKBQ6P4R8 1299 aa7.48□□□□□ -1.21
RTN4-205ENST00000394609 KIAA0319LQ8IZA0 1049 aa7.48□□□□□ -1.21
RTN4-205ENST00000394609 LINC01465Q8N7H1 131 aa7.48□□□□□ -1.21
RTN4-205ENST00000394609 CEP112Q8N8E3 955 aa7.48□□□□□ -1.21
RTN4-205ENST00000394609 MSANTD4Q8NCY6 345 aa7.48□□□□□ -1.21
RTN4-205ENST00000394609 LMBR1Q8WVP7 490 aa7.48□□□□□ -1.21
RTN4-205ENST00000394609 KAT5Q92993 513 aa7.48□□□□□ -1.21
RTN4-205ENST00000394609 FNBP1Q96RU3 617 aa7.48□□□□□ -1.21
RTN4-205ENST00000394609 NCAPGQ9BPX3 1015 aa7.48□□□□□ -1.21
RTN4-205ENST00000394609 TACO1Q9BSH4 297 aaKnown RBP7.48□□□□□ -1.21
RTN4-205ENST00000394609 PI4K2AQ9BTU6 479 aa7.48□□□□□ -1.21
RTN4-205ENST00000394609 STK33Q9BYT3 514 aa7.48□□□□□ -1.21
RTN4-205ENST00000394609 C2orf40Q9H1Z8 148 aa7.48□□□□□ -1.21
RTN4-205ENST00000394609 FZD8Q9H461 694 aa7.48□□□□□ -1.21
RTN4-205ENST00000394609 VIPAS39Q9H9C1 493 aa7.48□□□□□ -1.21
RTN4-205ENST00000394609 KIAA1586Q9HCI6 787 aa7.48□□□□□ -1.21
RTN4-205ENST00000394609 TMEM8AQ9HCN3 771 aa7.48□□□□□ -1.21
RTN4-205ENST00000394609 PGPEP1Q9NXJ5 209 aa7.48□□□□□ -1.21
RTN4-205ENST00000394609 ADAMTS1Q9UHI8 967 aa7.48□□□□□ -1.21
RTN4-205ENST00000394609 PTPRJQ12913 1337 aa7.48□□□□□ -1.21
RTN4-205ENST00000394609 A0A087X0T9 212 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 MYADML2A6NDP7 307 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 F8VZ95 297 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 FOXN3O00409 490 aaPredicted RBP7.47□□□□□ -1.21
RTN4-205ENST00000394609 ACKR2O00590 384 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 P4HA2O15460 535 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 N4BP1O75113 896 aaKnown RBP7.47□□□□□ -1.21
RTN4-205ENST00000394609 SASH3O75995 380 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 PGK1P00558 417 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 C6orf222P0C671 652 aaPredicted RBP7.47□□□□□ -1.21
RTN4-205ENST00000394609 FAM228BP0C875 321 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 AKR1A1P14550 325 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 ELNP15502 786 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 STAT1P42224 750 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 PHKA2P46019 1235 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 CPT1AP50416 773 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 SP3Q02447 781 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 PSMD6Q15008 389 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 FSCN1Q16658 493 aaKnown RBP7.47□□□□□ -1.21
RTN4-205ENST00000394609 LONRF2Q1L5Z9 754 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 KIZQ2M2Z5 673 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 ASTE1Q2TB18 679 aaPredicted RBP7.47□□□□□ -1.21
RTN4-205ENST00000394609 ZNF568Q3ZCX4 644 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 MFSD14CQ5VZR4 134 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 EEF1DP3Q658K8 133 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 SCARA3Q6AZY7 606 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 ZNF571Q7Z3V5 609 aaPredicted RBP7.47□□□□□ -1.21
RTN4-205ENST00000394609 USP37Q86T82 979 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 DNAAF5Q86Y56 855 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 THNSL1Q8IYQ7 743 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 CEP120Q8N960 986 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 FAM71BQ8TC56 605 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 JAKMIP2Q96AA8 810 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 CARD6Q9BX69 1037 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 IFIH1Q9BYX4 1025 aaKnown RBP7.47□□□□□ -1.21
RTN4-205ENST00000394609 GPR88Q9GZN0 384 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 RAB20Q9NX57 234 aa7.47□□□□□ -1.21
RTN4-205ENST00000394609 RNF186Q9NXI6 227 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms