RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 PTPN14Q15678 1187 aa6.36□□□□□ -1.39
CASC3-202ENST00000394114 ZNF280DQ6N043 979 aa6.36□□□□□ -1.39
CASC3-202ENST00000394114 METTL7BQ6UX53 244 aa6.36□□□□□ -1.39
CASC3-202ENST00000394114 STXBP4Q6ZWJ1 553 aa6.36□□□□□ -1.39
CASC3-202ENST00000394114 RASAL3Q86YV0 1011 aa6.36□□□□□ -1.39
CASC3-202ENST00000394114 ACRBPQ8NEB7 543 aa6.36□□□□□ -1.39
CASC3-202ENST00000394114 KISS1RQ969F8 398 aaPredicted RBP6.36□□□□□ -1.39
CASC3-202ENST00000394114 ZNF668Q96K58 619 aaPredicted RBP6.36□□□□□ -1.39
CASC3-202ENST00000394114 ERGIC2Q96RQ1 377 aa6.36□□□□□ -1.39
CASC3-202ENST00000394114 CBWD1Q9BRT8 395 aa6.36□□□□□ -1.39
CASC3-202ENST00000394114 POLR3FQ9H1D9 316 aaPredicted RBP6.36□□□□□ -1.39
CASC3-202ENST00000394114 KMT5AQ9NQR1 393 aa6.36□□□□□ -1.39
CASC3-202ENST00000394114 INTS7Q9NVH2 962 aaKnown RBP6.36□□□□□ -1.39
CASC3-202ENST00000394114 ZNF69Q9UC07 566 aa6.36□□□□□ -1.39
CASC3-202ENST00000394114 ZNF180Q9UJW8 692 aa6.36□□□□□ -1.39
CASC3-202ENST00000394114 SIK3Q9Y2K2 1263 aa6.36□□□□□ -1.39
CASC3-202ENST00000394114 PPP2R2CQ9Y2T4 447 aa6.36□□□□□ -1.39
CASC3-202ENST00000394114 ADGRA3Q8IWK6 1321 aa6.36□□□□□ -1.39
CASC3-202ENST00000394114 SNPHO15079 494 aa6.36□□□□□ -1.39
CASC3-202ENST00000394114 EXOC3O60645 756 aa6.36□□□□□ -1.39
CASC3-202ENST00000394114 DGAT1O75907 488 aa6.36□□□□□ -1.39
CASC3-202ENST00000394114 GNA14O95837 355 aa6.36□□□□□ -1.39
CASC3-202ENST00000394114 TRIM49P0CI25 452 aa6.36□□□□□ -1.39
CASC3-202ENST00000394114 TRIM49CP0CI26 452 aa6.36□□□□□ -1.39
CASC3-202ENST00000394114 ACTN1P12814 892 aa6.36□□□□□ -1.39
CASC3-202ENST00000394114 EDN3P14138 238 aa6.36□□□□□ -1.39
CASC3-202ENST00000394114 ADCYAP1R1P41586 468 aa6.36□□□□□ -1.39
CASC3-202ENST00000394114 DGKGP49619 791 aa6.36□□□□□ -1.39
CASC3-202ENST00000394114 SKOR1P84550 965 aa6.36□□□□□ -1.39
CASC3-202ENST00000394114 EMC2Q15006 297 aa6.36□□□□□ -1.39
CASC3-202ENST00000394114 RNF219Q5W0B1 726 aaPredicted RBP6.36□□□□□ -1.39
CASC3-202ENST00000394114 LHFPL2Q6ZUX7 228 aa6.36□□□□□ -1.39
CASC3-202ENST00000394114 SAPCD2Q86UD0 394 aa6.36□□□□□ -1.39
CASC3-202ENST00000394114 FAM186BQ8IYM0 893 aa6.36□□□□□ -1.39
CASC3-202ENST00000394114 SHCBP1Q8NEM2 672 aa6.36□□□□□ -1.39
CASC3-202ENST00000394114 OR8K1Q8NGG5 319 aa6.36□□□□□ -1.39
CASC3-202ENST00000394114 TRAPPC12Q8WVT3 735 aa6.36□□□□□ -1.39
CASC3-202ENST00000394114 CLUHP3Q96NS8 147 aa6.36□□□□□ -1.39
CASC3-202ENST00000394114 NECAB3Q96P71 396 aaPredicted RBP6.36□□□□□ -1.39
CASC3-202ENST00000394114 ZIC5Q96T25 663 aa6.36□□□□□ -1.39
CASC3-202ENST00000394114 LSM14BQ9BX40 385 aaKnown RBP6.36□□□□□ -1.39
CASC3-202ENST00000394114 TTYH3Q9C0H2 523 aa6.36□□□□□ -1.39
CASC3-202ENST00000394114 AZI2Q9H6S1 392 aa6.36□□□□□ -1.39
CASC3-202ENST00000394114 SUGCTQ9HAC7 445 aa6.36□□□□□ -1.39
CASC3-202ENST00000394114 ZFYVE1Q9HBF4 777 aa6.36□□□□□ -1.39
CASC3-202ENST00000394114 ATP6V0A4Q9HBG4 840 aa6.36□□□□□ -1.39
CASC3-202ENST00000394114 CAPN11Q9UMQ6 739 aa6.36□□□□□ -1.39
CASC3-202ENST00000394114 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.35□□□□□ -1.39
CASC3-202ENST00000394114 DKC1O60832 514 aaKnown RBP eCLIP6.35□□□□□ -1.39
CASC3-202ENST00000394114 CILPO75339 1184 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 ABLIM3O94929 683 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 PLEKP08567 350 aaPredicted RBP6.35□□□□□ -1.39
CASC3-202ENST00000394114 FAM163BP0C2L3 166 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 TGFB3P10600 412 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 SLC9A1P19634 815 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 DRP2Q13474 957 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 TRIM14Q14142 442 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 ZNF792Q3KQV3 632 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 CELF3Q5SZQ8 465 aaKnown RBP6.35□□□□□ -1.39
CASC3-202ENST00000394114 CCDC62Q6P9F0 684 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 WDR59Q6PJI9 974 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 FOXR2Q6PJQ5 311 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 RUFY4Q6ZNE9 571 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 RRAGAQ7L523 313 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 CACNA2D4Q7Z3S7 1137 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 ZBTB46Q86UZ6 589 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 ZC3H3Q8IXZ2 948 aaKnown RBP6.35□□□□□ -1.39
CASC3-202ENST00000394114 TMEM161BQ8NDZ6 487 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 RHBDD1Q8TEB9 315 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 PPP1R13LQ8WUF5 828 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 SEPT1Q8WYJ6 367 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 SAAL1Q96ER3 474 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 ACCSQ96QU6 501 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 TCF12Q99081 682 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 GPR20Q99678 358 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 YIPF4Q9BSR8 244 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 STRA6Q9BX79 667 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 RHOBTB2Q9BYZ6 727 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 LZTFL1Q9NQ48 299 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 OBP2AQ9NY56 170 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 MORF4L1Q9UBU8 362 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 SALL4Q9UJQ4 1053 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 ABT1Q9ULW3 272 aaKnown RBP6.35□□□□□ -1.39
CASC3-202ENST00000394114 TFR2Q9UP52 801 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 SLC45A1Q9Y2W3 748 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 LRRIQ4A6NIV6 560 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 ASB14A6NK59 587 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 LRRC53A6NM62 1247 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 ANKRD63C9JTQ0 380 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 GPR39O43194 453 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 HRO43593 1189 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 AFPP02771 609 aaKnown RBP6.35□□□□□ -1.39
CASC3-202ENST00000394114 GRNP28799 593 aaKnown RBP6.35□□□□□ -1.39
CASC3-202ENST00000394114 PSMC2P35998 433 aaKnown RBP6.35□□□□□ -1.39
CASC3-202ENST00000394114 NCKAP1LP55160 1127 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 POLR2FP61218 127 aaKnown RBP6.35□□□□□ -1.39
CASC3-202ENST00000394114 TTLL4Q14679 1199 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 FAM110CQ1W6H9 321 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 PRAMEF19Q5SWL8 479 aa6.35□□□□□ -1.39
CASC3-202ENST00000394114 FAM160B1Q5W0V3 765 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms