RNA–Protein interactions for RNA: ENST00000393211.3

COL17A1-203, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL17A1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-203ENST00000393211 IZUMO3Q5VZ72 239 aa10.62□□□□□ -0.71
COL17A1-203ENST00000393211 STYK1Q6J9G0 422 aa10.62□□□□□ -0.71
COL17A1-203ENST00000393211 C15orf39Q6ZRI6 1047 aa10.62□□□□□ -0.71
COL17A1-203ENST00000393211 MON1BQ7L1V2 547 aa10.62□□□□□ -0.71
COL17A1-203ENST00000393211 GPD1LQ8N335 351 aa10.62□□□□□ -0.71
COL17A1-203ENST00000393211 ZSWIM2Q8NEG5 633 aa10.62□□□□□ -0.71
COL17A1-203ENST00000393211 KCNN1Q92952 543 aa10.62□□□□□ -0.71
COL17A1-203ENST00000393211 CCDC127Q96BQ5 260 aa10.62□□□□□ -0.71
COL17A1-203ENST00000393211 OSBPL8Q9BZF1 889 aa10.62□□□□□ -0.71
COL17A1-203ENST00000393211 PHACTR1Q9C0D0 580 aa10.62□□□□□ -0.71
COL17A1-203ENST00000393211 LRMDAQ9H2I8 198 aa10.62□□□□□ -0.71
COL17A1-203ENST00000393211 FETUBQ9UGM5 382 aa10.62□□□□□ -0.71
COL17A1-203ENST00000393211 TCEAL9Q9UHQ7 104 aa10.62□□□□□ -0.71
COL17A1-203ENST00000393211 CCPG1Q9ULG6 757 aa10.62□□□□□ -0.71
COL17A1-203ENST00000393211 DRG1Q9Y295 367 aaKnown RBP10.62□□□□□ -0.71
COL17A1-203ENST00000393211 USH1CQ9Y6N9 552 aa10.62□□□□□ -0.71
COL17A1-203ENST00000393211 WDR64B1ANS9 1081 aa10.61□□□□□ -0.71
COL17A1-203ENST00000393211 RASA4BC9J798 803 aa10.61□□□□□ -0.71
COL17A1-203ENST00000393211 RASA4O43374 803 aa10.61□□□□□ -0.71
COL17A1-203ENST00000393211 LUC7L3O95232 432 aaKnown RBP10.61□□□□□ -0.71
COL17A1-203ENST00000393211 ASMTLO95671 621 aa10.61□□□□□ -0.71
COL17A1-203ENST00000393211 RRM1P23921 792 aa10.61□□□□□ -0.71
COL17A1-203ENST00000393211 NPTX2P47972 431 aa10.61□□□□□ -0.71
COL17A1-203ENST00000393211 RASSF2P50749 326 aa10.61□□□□□ -0.71
COL17A1-203ENST00000393211 POLGP54098 1239 aaPredicted RBP10.61□□□□□ -0.71
COL17A1-203ENST00000393211 MCL1Q07820 350 aa10.61□□□□□ -0.71
COL17A1-203ENST00000393211 MKRN4PQ13434 485 aaPredicted RBP10.61□□□□□ -0.71
COL17A1-203ENST00000393211 MTMR1Q13613 665 aa10.61□□□□□ -0.71
COL17A1-203ENST00000393211 SPARCL1Q14515 664 aa10.61□□□□□ -0.71
COL17A1-203ENST00000393211 CCDC142Q17RM4 750 aa10.61□□□□□ -0.71
COL17A1-203ENST00000393211 ACCSLQ4AC99 568 aa10.61□□□□□ -0.71
COL17A1-203ENST00000393211 CMPK2Q5EBM0 449 aa10.61□□□□□ -0.71
COL17A1-203ENST00000393211 XKR9Q5GH70 373 aa10.61□□□□□ -0.71
COL17A1-203ENST00000393211 WDR44Q5JSH3 913 aa10.61□□□□□ -0.71
COL17A1-203ENST00000393211 FAM102BQ5T8I3 360 aa10.61□□□□□ -0.71
COL17A1-203ENST00000393211 FKBP1CQ5VVH2 108 aa10.61□□□□□ -0.71
COL17A1-203ENST00000393211 CGB2Q6NT52 195 aa10.61□□□□□ -0.71
COL17A1-203ENST00000393211 XRRA1Q6P2D8 792 aa10.61□□□□□ -0.71
COL17A1-203ENST00000393211 TRABD2AQ86V40 505 aa10.61□□□□□ -0.71
COL17A1-203ENST00000393211 PHF13Q86YI8 300 aaPredicted RBP10.61□□□□□ -0.71
COL17A1-203ENST00000393211 SRRM1Q8IYB3 904 aaKnown RBP10.61□□□□□ -0.71
COL17A1-203ENST00000393211 RCOR2Q8IZ40 523 aa10.61□□□□□ -0.71
COL17A1-203ENST00000393211 CYP4X1Q8N118 509 aa10.61□□□□□ -0.71
COL17A1-203ENST00000393211 GDAP1Q8TB36 358 aa10.61□□□□□ -0.71
COL17A1-203ENST00000393211 ZNF398Q8TD17 642 aa10.61□□□□□ -0.71
COL17A1-203ENST00000393211 DENND1AQ8TEH3 1009 aa10.61□□□□□ -0.71
COL17A1-203ENST00000393211 ATG4AQ8WYN0 398 aa10.61□□□□□ -0.71
COL17A1-203ENST00000393211 RBM41Q96IZ5 413 aaKnown RBP10.61□□□□□ -0.71
COL17A1-203ENST00000393211 PRMT6Q96LA8 375 aaPredicted RBP10.61□□□□□ -0.71
COL17A1-203ENST00000393211 SENP7Q9BQF6 1050 aa10.61□□□□□ -0.71
COL17A1-203ENST00000393211 ACP6Q9NPH0 428 aa10.61□□□□□ -0.71
COL17A1-203ENST00000393211 KMT5AQ9NQR1 393 aa10.61□□□□□ -0.71
COL17A1-203ENST00000393211 CTNNAL1Q9UBT7 734 aa10.61□□□□□ -0.71
COL17A1-203ENST00000393211 SLC24A2Q9UI40 661 aa10.61□□□□□ -0.71
COL17A1-203ENST00000393211 UMODL1Q5DID0 1318 aa10.61□□□□□ -0.71
COL17A1-203ENST00000393211 GSTTP1A0A1W2PQM5 241 aa10.6□□□□□ -0.71
COL17A1-203ENST00000393211 DENND3A2RUS2 1198 aa10.6□□□□□ -0.71
COL17A1-203ENST00000393211 DNALI1O14645 258 aaPredicted RBP10.6□□□□□ -0.71
COL17A1-203ENST00000393211 GH1P01241 217 aa10.6□□□□□ -0.71
COL17A1-203ENST00000393211 RALAP11233 206 aa10.6□□□□□ -0.71
COL17A1-203ENST00000393211 ATP2A2P16615 1042 aaKnown RBP10.6□□□□□ -0.71
COL17A1-203ENST00000393211 PTPN7P35236 360 aa10.6□□□□□ -0.71
COL17A1-203ENST00000393211 CAP2P40123 477 aa10.6□□□□□ -0.71
COL17A1-203ENST00000393211 C1QBPQ07021 282 aaKnown RBP10.6□□□□□ -0.71
COL17A1-203ENST00000393211 MORF4L2Q15014 288 aa10.6□□□□□ -0.71
COL17A1-203ENST00000393211 LRRC38Q5VT99 294 aa10.6□□□□□ -0.71
COL17A1-203ENST00000393211 PLEKHA7Q6IQ23 1121 aa10.6□□□□□ -0.71
COL17A1-203ENST00000393211 ECHDC2Q86YB7 292 aa10.6□□□□□ -0.71
COL17A1-203ENST00000393211 SUPT20HQ8NEM7 779 aa10.6□□□□□ -0.71
COL17A1-203ENST00000393211 FLAD1Q8NFF5 587 aa10.6□□□□□ -0.71
COL17A1-203ENST00000393211 CLEC4DQ8WXI8 215 aa10.6□□□□□ -0.71
COL17A1-203ENST00000393211 POMGNT1Q8WZA1 660 aa10.6□□□□□ -0.71
COL17A1-203ENST00000393211 SAAL1Q96ER3 474 aa10.6□□□□□ -0.71
COL17A1-203ENST00000393211 RMDN2Q96LZ7 410 aa10.6□□□□□ -0.71
COL17A1-203ENST00000393211 RBM15Q96T37 977 aaKnown RBP eCLIP10.6□□□□□ -0.71
COL17A1-203ENST00000393211 BCS1LQ9Y276 419 aa10.6□□□□□ -0.71
COL17A1-203ENST00000393211 R3HDM2Q9Y2K5 976 aaKnown RBP10.6□□□□□ -0.71
COL17A1-203ENST00000393211 PSME4Q14997 1843 aa10.6□□□□□ -0.71
COL17A1-203ENST00000393211 EXOC1LA0A1B0GW35 172 aa10.59□□□□□ -0.71
COL17A1-203ENST00000393211 TRAFD1O14545 582 aaPredicted RBP10.59□□□□□ -0.71
COL17A1-203ENST00000393211 ATP2A1O14983 1001 aa10.59□□□□□ -0.71
COL17A1-203ENST00000393211 MAFGO15525 162 aa10.59□□□□□ -0.71
COL17A1-203ENST00000393211 ZBED4O75132 1171 aa10.59□□□□□ -0.71
COL17A1-203ENST00000393211 FDX1P10109 184 aa10.59□□□□□ -0.71
COL17A1-203ENST00000393211 CETPP11597 493 aa10.59□□□□□ -0.71
COL17A1-203ENST00000393211 FOXN2P32314 431 aa10.59□□□□□ -0.71
COL17A1-203ENST00000393211 WDR4P57081 412 aaKnown RBP10.59□□□□□ -0.71
COL17A1-203ENST00000393211 MRPS9P82933 396 aaKnown RBP10.59□□□□□ -0.71
COL17A1-203ENST00000393211 MGAT5Q09328 741 aa10.59□□□□□ -0.71
COL17A1-203ENST00000393211 MOGSQ13724 837 aa10.59□□□□□ -0.71
COL17A1-203ENST00000393211 NAA25Q14CX7 972 aa10.59□□□□□ -0.71
COL17A1-203ENST00000393211 PSMD6Q15008 389 aa10.59□□□□□ -0.71
COL17A1-203ENST00000393211 PDK4Q16654 411 aa10.59□□□□□ -0.71
COL17A1-203ENST00000393211 EAPPQ56P03 285 aaPredicted RBP10.59□□□□□ -0.71
COL17A1-203ENST00000393211 TMEM63BQ5T3F8 832 aa10.59□□□□□ -0.71
COL17A1-203ENST00000393211 ABRAQ8N0Z2 381 aa10.59□□□□□ -0.71
COL17A1-203ENST00000393211 TEX9Q8N6V9 391 aa10.59□□□□□ -0.71
COL17A1-203ENST00000393211 MCPH1Q8NEM0 835 aa10.59□□□□□ -0.71
COL17A1-203ENST00000393211 HERPUD2Q9BSE4 406 aa10.59□□□□□ -0.71
COL17A1-203ENST00000393211 ETNK1Q9HBU6 452 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms