RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 TXLNGYQ9BZA5 131 aa15.26■□□□□ 0.03
MKS1-203ENST00000393120 MRPL47Q9HD33 250 aaKnown RBP15.26■□□□□ 0.03
MKS1-203ENST00000393120 CALCOCO1Q9P1Z2 691 aa15.26■□□□□ 0.03
MKS1-203ENST00000393120 PLAAQ9Y263 795 aa15.26■□□□□ 0.03
MKS1-203ENST00000393120 SLC45A1Q9Y2W3 748 aa15.26■□□□□ 0.03
MKS1-203ENST00000393120 NFS1Q9Y697 457 aa15.26■□□□□ 0.03
MKS1-203ENST00000393120 MYO1FO00160 1098 aa15.25■□□□□ 0.03
MKS1-203ENST00000393120 B4GALT4O60513 344 aa15.25■□□□□ 0.03
MKS1-203ENST00000393120 PPFIA2O75334 1257 aa15.25■□□□□ 0.03
MKS1-203ENST00000393120 CST3P01034 146 aaPredicted RBP15.25■□□□□ 0.03
MKS1-203ENST00000393120 KRT14P02533 472 aa15.25■□□□□ 0.03
MKS1-203ENST00000393120 GJA5P36382 358 aa15.25■□□□□ 0.03
MKS1-203ENST00000393120 FNTAP49354 379 aa15.25■□□□□ 0.03
MKS1-203ENST00000393120 LAMC2Q13753 1193 aa15.25■□□□□ 0.03
MKS1-203ENST00000393120 SIX1Q15475 284 aaPredicted RBP15.25■□□□□ 0.03
MKS1-203ENST00000393120 UAP1Q16222 522 aaPredicted RBP15.25■□□□□ 0.03
MKS1-203ENST00000393120 ZSCAN26Q16670 478 aa15.25■□□□□ 0.03
MKS1-203ENST00000393120 SEZ6Q53EL9 994 aa15.25■□□□□ 0.03
MKS1-203ENST00000393120 ZNF484Q5JVG2 852 aa15.25■□□□□ 0.03
MKS1-203ENST00000393120 ADAT2Q7Z6V5 191 aaKnown RBP15.25■□□□□ 0.03
MKS1-203ENST00000393120 ZBTB33Q86T24 672 aa15.25■□□□□ 0.03
MKS1-203ENST00000393120 LRRC71Q8N4P6 559 aa15.25■□□□□ 0.03
MKS1-203ENST00000393120 SLCO2A1Q92959 643 aa15.25■□□□□ 0.03
MKS1-203ENST00000393120 TRIM51Q9BSJ1 452 aa15.25■□□□□ 0.03
MKS1-203ENST00000393120 FAM129AQ9BZQ8 928 aa15.25■□□□□ 0.03
MKS1-203ENST00000393120 LRRC19Q9H756 370 aa15.25■□□□□ 0.03
MKS1-203ENST00000393120 ZDHHC18Q9NUE0 388 aa15.25■□□□□ 0.03
MKS1-203ENST00000393120 ERAP1Q9NZ08 941 aa15.25■□□□□ 0.03
MKS1-203ENST00000393120 TNFSF13BQ9Y275 285 aa15.25■□□□□ 0.03
MKS1-203ENST00000393120 RBM47A0AV96 593 aaKnown RBP15.25■□□□□ 0.03
MKS1-203ENST00000393120 PROSCO94903 275 aa15.25■□□□□ 0.03
MKS1-203ENST00000393120 HARSP12081 509 aaKnown RBP15.25■□□□□ 0.03
MKS1-203ENST00000393120 CCNA1P78396 465 aa15.25■□□□□ 0.03
MKS1-203ENST00000393120 PLEKHA7Q6IQ23 1121 aa15.25■□□□□ 0.03
MKS1-203ENST00000393120 CPNE8Q86YQ8 564 aa15.25■□□□□ 0.03
MKS1-203ENST00000393120 RHPN2Q8IUC4 686 aa15.25■□□□□ 0.03
MKS1-203ENST00000393120 GPRC5AQ8NFJ5 357 aa15.25■□□□□ 0.03
MKS1-203ENST00000393120 MAIP1Q8WWC4 291 aa15.25■□□□□ 0.03
MKS1-203ENST00000393120 COPS5Q92905 334 aa15.25■□□□□ 0.03
MKS1-203ENST00000393120 C18orf8Q96DM3 657 aa15.25■□□□□ 0.03
MKS1-203ENST00000393120 FAXDC2Q96IV6 333 aa15.25■□□□□ 0.03
MKS1-203ENST00000393120 DPH5Q9H2P9 285 aa15.25■□□□□ 0.03
MKS1-203ENST00000393120 ADAM22Q9P0K1 906 aa15.25■□□□□ 0.03
MKS1-203ENST00000393120 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.25■□□□□ 0.03
MKS1-203ENST00000393120 UMODL1Q5DID0 1318 aa15.25■□□□□ 0.03
MKS1-203ENST00000393120 HMGB1P1B2RPK0 211 aaPredicted RBP15.24■□□□□ 0.03
MKS1-203ENST00000393120 ERLIN2O94905 339 aa15.24■□□□□ 0.03
MKS1-203ENST00000393120 LSM8O95777 96 aaKnown RBP15.24■□□□□ 0.03
MKS1-203ENST00000393120 IVLP07476 585 aa15.24■□□□□ 0.03
MKS1-203ENST00000393120 RARAP10276 462 aa15.24■□□□□ 0.03
MKS1-203ENST00000393120 COILP38432 576 aaPredicted RBP15.24■□□□□ 0.03
MKS1-203ENST00000393120 HNRNPH2P55795 449 aaKnown RBP15.24■□□□□ 0.03
MKS1-203ENST00000393120 MAMLD1Q13495 774 aa15.24■□□□□ 0.03
MKS1-203ENST00000393120 FAM187BQ17R55 369 aa15.24■□□□□ 0.03
MKS1-203ENST00000393120 ZNF792Q3KQV3 632 aa15.24■□□□□ 0.03
MKS1-203ENST00000393120 ATF7IP2Q5U623 682 aa15.24■□□□□ 0.03
MKS1-203ENST00000393120 EFCAB12Q6NXP0 572 aa15.24■□□□□ 0.03
MKS1-203ENST00000393120 TTC27Q6P3X3 843 aa15.24■□□□□ 0.03
MKS1-203ENST00000393120 CCDC137Q6PK04 289 aaKnown RBP15.24■□□□□ 0.03
MKS1-203ENST00000393120 ARMCX2Q7L311 632 aa15.24■□□□□ 0.03
MKS1-203ENST00000393120 IFNLR1Q8IU57 520 aaPredicted RBP15.24■□□□□ 0.03
MKS1-203ENST00000393120 EMID1Q96A84 441 aaPredicted RBP15.24■□□□□ 0.03
MKS1-203ENST00000393120 SLC10A4Q96EP9 437 aa15.24■□□□□ 0.03
MKS1-203ENST00000393120 ATP6V1G3Q96LB4 118 aa15.24■□□□□ 0.03
MKS1-203ENST00000393120 FMO2Q99518 471 aa15.24■□□□□ 0.03
MKS1-203ENST00000393120 NIF3L1Q9GZT8 377 aa15.24■□□□□ 0.03
MKS1-203ENST00000393120 PDGFCQ9NRA1 345 aa15.24■□□□□ 0.03
MKS1-203ENST00000393120 PARP2Q9UGN5 583 aa15.24■□□□□ 0.03
MKS1-203ENST00000393120 LCMT1Q9UIC8 334 aa15.24■□□□□ 0.03
MKS1-203ENST00000393120 SCINQ9Y6U3 715 aa15.24■□□□□ 0.03
MKS1-203ENST00000393120 THAP12O43422 761 aa15.23■□□□□ 0.03
MKS1-203ENST00000393120 C22orf31O95567 290 aa15.23■□□□□ 0.03
MKS1-203ENST00000393120 HOXC6P09630 235 aa15.23■□□□□ 0.03
MKS1-203ENST00000393120 MAN1A1P33908 653 aa15.23■□□□□ 0.03
MKS1-203ENST00000393120 FLT3P36888 993 aa15.23■□□□□ 0.03
MKS1-203ENST00000393120 MYL6P60660 151 aa15.23■□□□□ 0.03
MKS1-203ENST00000393120 MBTD1Q05BQ5 628 aa15.23■□□□□ 0.03
MKS1-203ENST00000393120 ARHGAP1Q07960 439 aa15.23■□□□□ 0.03
MKS1-203ENST00000393120 WDR78Q5VTH9 848 aa15.23■□□□□ 0.03
MKS1-203ENST00000393120 TAPT1Q6NXT6 567 aa15.23■□□□□ 0.03
MKS1-203ENST00000393120 ZNF606Q8WXB4 792 aa15.23■□□□□ 0.03
MKS1-203ENST00000393120 ZNF518BQ9C0D4 1074 aa15.23■□□□□ 0.03
MKS1-203ENST00000393120 MTMR12Q9C0I1 747 aa15.23■□□□□ 0.03
MKS1-203ENST00000393120 EFCC1Q9HA90 598 aa15.23■□□□□ 0.03
MKS1-203ENST00000393120 TMBIM4Q9HC24 238 aa15.23■□□□□ 0.03
MKS1-203ENST00000393120 VTA1Q9NP79 307 aa15.23■□□□□ 0.03
MKS1-203ENST00000393120 MAGEB2O15479 319 aa15.23■□□□□ 0.03
MKS1-203ENST00000393120 PSTPIP1O43586 416 aa15.23■□□□□ 0.03
MKS1-203ENST00000393120 IL18RAPO95256 599 aa15.23■□□□□ 0.03
MKS1-203ENST00000393120 CFHP08603 1231 aa15.23■□□□□ 0.03
MKS1-203ENST00000393120 MMP8P22894 467 aa15.23■□□□□ 0.03
MKS1-203ENST00000393120 DHX9Q08211 1270 aaKnown RBP15.23■□□□□ 0.03
MKS1-203ENST00000393120 LRRC31Q6UY01 552 aa15.23■□□□□ 0.03
MKS1-203ENST00000393120 KDM7AQ6ZMT4 941 aa15.23■□□□□ 0.03
MKS1-203ENST00000393120 ZNF467Q7Z7K2 595 aaPredicted RBP15.23■□□□□ 0.03
MKS1-203ENST00000393120 DDX27Q96GQ7 796 aaKnown RBP15.23■□□□□ 0.03
MKS1-203ENST00000393120 RNPEPQ9H4A4 650 aa15.23■□□□□ 0.03
MKS1-203ENST00000393120 PRMT7Q9NVM4 692 aaPredicted RBP15.23■□□□□ 0.03
MKS1-203ENST00000393120 GRHL1Q9NZI5 618 aa15.23■□□□□ 0.03
MKS1-203ENST00000393120 ZNFX1Q9P2E3 1918 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms