RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 GRM6O15303 877 aa16.09■□□□□ 0.17
SUMO1-203ENST00000392246 TRAPPC3O43617 180 aa16.09■□□□□ 0.17
SUMO1-203ENST00000392246 C4BPAP04003 597 aaKnown RBP16.09■□□□□ 0.17
SUMO1-203ENST00000392246 KRT19P08727 400 aa16.09■□□□□ 0.17
SUMO1-203ENST00000392246 TRIM49P0CI25 452 aa16.09■□□□□ 0.17
SUMO1-203ENST00000392246 TRIM49CP0CI26 452 aa16.09■□□□□ 0.17
SUMO1-203ENST00000392246 PAX3P23760 479 aa16.09■□□□□ 0.17
SUMO1-203ENST00000392246 POLR2BP30876 1174 aaKnown RBP16.09■□□□□ 0.17
SUMO1-203ENST00000392246 MYL5Q02045 173 aa16.09■□□□□ 0.17
SUMO1-203ENST00000392246 ELAVL2Q12926 359 aaKnown RBP16.09■□□□□ 0.17
SUMO1-203ENST00000392246 DCAF17Q5H9S7 520 aaPredicted RBP16.09■□□□□ 0.17
SUMO1-203ENST00000392246 TCERG1LQ5VWI1 586 aa16.09■□□□□ 0.17
SUMO1-203ENST00000392246 FUT10Q6P4F1 479 aa16.09■□□□□ 0.17
SUMO1-203ENST00000392246 CD300LGQ6UXG3 332 aa16.09■□□□□ 0.17
SUMO1-203ENST00000392246 CREBRFQ8IUR6 639 aa16.09■□□□□ 0.17
SUMO1-203ENST00000392246 C3orf58Q8NDZ4 430 aa16.09■□□□□ 0.17
SUMO1-203ENST00000392246 CXorf38Q8TB03 319 aa16.09■□□□□ 0.17
SUMO1-203ENST00000392246 GDPD5Q8WTR4 605 aa16.09■□□□□ 0.17
SUMO1-203ENST00000392246 FAM84AQ96KN4 292 aa16.09■□□□□ 0.17
SUMO1-203ENST00000392246 FAM161BQ96MY7 647 aa16.09■□□□□ 0.17
SUMO1-203ENST00000392246 LMAN2LQ9H0V9 348 aa16.09■□□□□ 0.17
SUMO1-203ENST00000392246 PRDM12Q9H4Q4 367 aa16.09■□□□□ 0.17
SUMO1-203ENST00000392246 SIX4Q9UIU6 781 aa16.09■□□□□ 0.17
SUMO1-203ENST00000392246 AGAP1Q9UPQ3 857 aa16.09■□□□□ 0.17
SUMO1-203ENST00000392246 RFXAPO00287 272 aa16.09■□□□□ 0.17
SUMO1-203ENST00000392246 PPEF2O14830 753 aa16.09■□□□□ 0.17
SUMO1-203ENST00000392246 PHACTR2O75167 634 aa16.09■□□□□ 0.17
SUMO1-203ENST00000392246 CAVIN2O95810 425 aa16.09■□□□□ 0.17
SUMO1-203ENST00000392246 EFEMP2O95967 443 aa16.09■□□□□ 0.17
SUMO1-203ENST00000392246 IGFBP6P24592 240 aaPredicted RBP16.09■□□□□ 0.17
SUMO1-203ENST00000392246 PNPLA4P41247 253 aa16.09■□□□□ 0.17
SUMO1-203ENST00000392246 GCLMP48507 274 aa16.09■□□□□ 0.17
SUMO1-203ENST00000392246 ZNF165P49910 485 aa16.09■□□□□ 0.17
SUMO1-203ENST00000392246 LILRA4P59901 499 aa16.09■□□□□ 0.17
SUMO1-203ENST00000392246 PPP3CAQ08209 521 aa16.09■□□□□ 0.17
SUMO1-203ENST00000392246 BIRC3Q13489 604 aa16.09■□□□□ 0.17
SUMO1-203ENST00000392246 ZACNQ401N2 412 aa16.09■□□□□ 0.17
SUMO1-203ENST00000392246 SV2AQ7L0J3 742 aa16.09■□□□□ 0.17
SUMO1-203ENST00000392246 IRF2BP1Q8IU81 584 aa16.09■□□□□ 0.17
SUMO1-203ENST00000392246 LRRC52Q8N7C0 313 aa16.09■□□□□ 0.17
SUMO1-203ENST00000392246 CNOT6LQ96LI5 555 aaKnown RBP16.09■□□□□ 0.17
SUMO1-203ENST00000392246 ZNF560Q96MR9 790 aa16.09■□□□□ 0.17
SUMO1-203ENST00000392246 GPR62Q9BZJ7 368 aa16.09■□□□□ 0.17
SUMO1-203ENST00000392246 TMEM8AQ9HCN3 771 aa16.09■□□□□ 0.17
SUMO1-203ENST00000392246 MAGEC2Q9UBF1 373 aaPredicted RBP16.09■□□□□ 0.17
SUMO1-203ENST00000392246 SMTNL1A8MU46 457 aa16.08■□□□□ 0.16
SUMO1-203ENST00000392246 LPXNO60711 386 aa16.08■□□□□ 0.16
SUMO1-203ENST00000392246 CST3P01034 146 aaPredicted RBP16.08■□□□□ 0.16
SUMO1-203ENST00000392246 SOD2P04179 222 aa16.08■□□□□ 0.16
SUMO1-203ENST00000392246 BRCC3P46736 316 aa16.08■□□□□ 0.16
SUMO1-203ENST00000392246 TAF6P49848 677 aa16.08■□□□□ 0.16
SUMO1-203ENST00000392246 TRPC3Q13507 836 aa16.08■□□□□ 0.16
SUMO1-203ENST00000392246 BMS1Q14692 1282 aaKnown RBP16.08■□□□□ 0.16
SUMO1-203ENST00000392246 PTPROQ16827 1216 aa16.08■□□□□ 0.16
SUMO1-203ENST00000392246 TDRD10Q5VZ19 366 aaKnown RBP16.08■□□□□ 0.16
SUMO1-203ENST00000392246 KRT39Q6A163 491 aa16.08■□□□□ 0.16
SUMO1-203ENST00000392246 C15orf39Q6ZRI6 1047 aa16.08■□□□□ 0.16
SUMO1-203ENST00000392246 Q7L0L9 218 aa16.08■□□□□ 0.16
SUMO1-203ENST00000392246 TRIM59Q8IWR1 403 aa16.08■□□□□ 0.16
SUMO1-203ENST00000392246 RNF168Q8IYW5 571 aaPredicted RBP16.08■□□□□ 0.16
SUMO1-203ENST00000392246 VPS52Q8N1B4 723 aa16.08■□□□□ 0.16
SUMO1-203ENST00000392246 DEFB123Q8N688 67 aa16.08■□□□□ 0.16
SUMO1-203ENST00000392246 SLC35C1Q96A29 364 aa16.08■□□□□ 0.16
SUMO1-203ENST00000392246 VN1R3Q9BXE9 311 aa16.08■□□□□ 0.16
SUMO1-203ENST00000392246 MMRN2Q9H8L6 949 aa16.08■□□□□ 0.16
SUMO1-203ENST00000392246 TLR9Q9NR96 1032 aa16.08■□□□□ 0.16
SUMO1-203ENST00000392246 SAMSN1Q9NSI8 373 aaKnown RBP16.08■□□□□ 0.16
SUMO1-203ENST00000392246 COL4A4P53420 1690 aaPredicted RBP16.08■□□□□ 0.16
SUMO1-203ENST00000392246 DNAJB1P25685 340 aa16.07■□□□□ 0.16
SUMO1-203ENST00000392246 AARSP49588 968 aaKnown RBP eCLIP16.07■□□□□ 0.16
SUMO1-203ENST00000392246 MYO1EQ12965 1108 aa16.07■□□□□ 0.16
SUMO1-203ENST00000392246 USP41Q3LFD5 358 aa16.07■□□□□ 0.16
SUMO1-203ENST00000392246 SV2CQ496J9 727 aa16.07■□□□□ 0.16
SUMO1-203ENST00000392246 TIGD5Q53EQ6 642 aa16.07■□□□□ 0.16
SUMO1-203ENST00000392246 FAM171A1Q5VUB5 890 aa16.07■□□□□ 0.16
SUMO1-203ENST00000392246 PDE12Q6L8Q7 609 aaKnown RBP16.07■□□□□ 0.16
SUMO1-203ENST00000392246 LRSAM1Q6UWE0 723 aa16.07■□□□□ 0.16
SUMO1-203ENST00000392246 AOPEPQ8N6M6 819 aa16.07■□□□□ 0.16
SUMO1-203ENST00000392246 SUSD3Q96L08 255 aa16.07■□□□□ 0.16
SUMO1-203ENST00000392246 HERC2P3Q9BVR0 1158 aa16.07■□□□□ 0.16
SUMO1-203ENST00000392246 FANCLQ9NW38 375 aa16.07■□□□□ 0.16
SUMO1-203ENST00000392246 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.07■□□□□ 0.16
SUMO1-203ENST00000392246 KPNA7A9QM74 516 aa16.06■□□□□ 0.16
SUMO1-203ENST00000392246 ATICP31939 592 aa16.06■□□□□ 0.16
SUMO1-203ENST00000392246 MTIF2P46199 727 aaKnown RBP16.06■□□□□ 0.16
SUMO1-203ENST00000392246 MXI1P50539 228 aa16.06■□□□□ 0.16
SUMO1-203ENST00000392246 NCOA4Q13772 614 aa16.06■□□□□ 0.16
SUMO1-203ENST00000392246 CAMK1Q14012 370 aa16.06■□□□□ 0.16
SUMO1-203ENST00000392246 NCAPHQ15003 741 aa16.06■□□□□ 0.16
SUMO1-203ENST00000392246 HSP90AA4PQ58FG1 418 aa16.06■□□□□ 0.16
SUMO1-203ENST00000392246 SCARA3Q6AZY7 606 aa16.06■□□□□ 0.16
SUMO1-203ENST00000392246 KIAA1841Q6NSI8 718 aa16.06■□□□□ 0.16
SUMO1-203ENST00000392246 DSTYKQ6XUX3 929 aa16.06■□□□□ 0.16
SUMO1-203ENST00000392246 TAS1R1Q7RTX1 841 aa16.06■□□□□ 0.16
SUMO1-203ENST00000392246 TMC7Q7Z402 723 aa16.06■□□□□ 0.16
SUMO1-203ENST00000392246 MICAL1Q8TDZ2 1067 aa16.06■□□□□ 0.16
SUMO1-203ENST00000392246 MRPL38Q96DV4 380 aaKnown RBP16.06■□□□□ 0.16
SUMO1-203ENST00000392246 HPDLQ96IR7 371 aa16.06■□□□□ 0.16
SUMO1-203ENST00000392246 GAS2L1Q99501 681 aaPredicted RBP16.06■□□□□ 0.16
SUMO1-203ENST00000392246 ZBP1Q9H171 429 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms