RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 OR56A1Q8NGH5 318 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 ZPLD1Q8TCW7 415 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 PPIL4Q8WUA2 492 aaKnown RBP eCLIP-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 PHF10Q8WUB8 498 aaKnown RBP-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 STAG1Q8WVM7 1258 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 TFAP2BQ92481 460 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 RPGRQ92834 1020 aaKnown RBP-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 SLC25A28Q96A46 364 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 TMEM169Q96HH4 297 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 CFAP44Q96MT7 982 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 ZDHHC15Q96MV8 337 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 SLC46A1Q96NT5 459 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 FOXN4Q96NZ1 517 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 PGLYRP2Q96PD5 576 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 DUX5Q96PT3 197 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 SIGLEC11Q96RL6 698 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 MMP19Q99542 508 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 RBM4BQ9BQ04 359 aaKnown RBP-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 TRIM51Q9BSJ1 452 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 CDK19Q9BWU1 502 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 BTBD2Q9BX70 525 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 BCO2Q9BYV7 579 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 MTFR1LQ9H019 292 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 RBM38Q9H0Z9 239 aaKnown RBP-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 OR10A5Q9H207 317 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 PRDM12Q9H4Q4 367 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 PDZD7Q9H5P4 517 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 ZNF696Q9H7X3 374 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 C14orf93Q9H972 538 aaKnown RBP-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 KANSL2Q9H9L4 492 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 GOPCQ9HD26 462 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 SLC39A2Q9NP94 309 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 INCENPQ9NQS7 918 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 ZNF446Q9NWS9 450 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 DDX43Q9NXZ2 648 aaKnown RBP-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 DONSONQ9NYP3 566 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 CXXC1Q9P0U4 656 aaPredicted RBP-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 GMIPQ9P107 970 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 NCDNQ9UBB6 729 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 PPARGC1AQ9UBK2 798 aaKnown RBP-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 HDAC6Q9UBN7 1215 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 NKX1-2Q9UD57 310 aaPredicted RBP-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 KCNE5Q9UJ90 142 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 POMT2Q9UKY4 750 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 ZNRF3Q9ULT6 936 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 MYO6Q9UM54 1294 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 ST3GAL5Q9UNP4 418 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 TCF19Q9Y242 345 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 ATP11BQ9Y2G3 1177 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 ZBTB1Q9Y2K1 713 aa-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 TIMM13Q9Y5L4 95 aaPredicted RBP-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 ACIN1Q9UKV3 1341 aaKnown RBP-0.16□□□□□ -2.44
TRAJ28-201ENST00000390509 PCLOQ9Y6V0 5065 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 A0A087WZG4 1122 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 A0A1B0GTW7 788 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 FAM172BPA6NC97 362 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 C2orf78A6NCI8 922 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 FAM220BPB1ANY3 271 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 B5MCH6 92 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 ADM5C9JUS6 153 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 H0Y9J4 135 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 H7BY64 318 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 EIF1AYO14602 144 aaKnown RBP-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 SLC27A2O14975 620 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 HNRNPDLO14979 420 aaKnown RBP-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 SHOXO15266 292 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 CTIFO43310 598 aaKnown RBP-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 KIF1CO43896 1103 aaKnown RBP-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 FZD6O60353 706 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 NRP2O60462 931 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 TLR2O60603 784 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 ZNF354AO60765 605 aaPredicted RBP-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 DNAJA2O60884 412 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 ERN1O75460 977 aaKnown RBP-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 STC2O76061 302 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 RNF8O76064 485 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 FAM13AO94988 1023 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 CHRM2P08172 466 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 SNRNP70P08621 437 aaKnown RBP-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 CHRM5P08912 532 aaPredicted RBP-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 WEE2P0C1S8 567 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 NHLRC4P0CG21 123 aaPredicted RBP-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 SRGNP10124 158 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 RARBP10826 455 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 PLS3P13797 630 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 HSP90B1P14625 803 aaKnown RBP-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 HOXB2P14652 356 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 ACADSP16219 412 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 GATA2P23769 480 aaPredicted RBP-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 YY1P25490 414 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 PCSK6P29122 969 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 POLR2BP30876 1174 aaKnown RBP-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 HOXA11P31270 313 aaPredicted RBP-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 THBS4P35443 961 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 ECI1P42126 302 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 ECE1P42892 770 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 PTGER3P43115 390 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 CLCN5P51795 746 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 DRG2P55039 364 aaKnown RBP-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 P2RX3P56373 397 aa-0.17□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms