RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 GJD2Q9UKL4 321 aa26.94■■□□□ 1.9
SHOX2-201ENST00000389589 TTC7AQ9ULT0 858 aaPredicted RBP26.94■■□□□ 1.9
SHOX2-201ENST00000389589 FAM170AA1A519 330 aa26.94■■□□□ 1.9
SHOX2-201ENST00000389589 CLUL1Q15846 466 aa26.94■■□□□ 1.9
SHOX2-201ENST00000389589 CCL14Q16627 93 aa26.94■■□□□ 1.9
SHOX2-201ENST00000389589 HDXQ7Z353 690 aa26.94■■□□□ 1.9
SHOX2-201ENST00000389589 KAT2BQ92831 832 aa26.94■■□□□ 1.9
SHOX2-201ENST00000389589 FAXDC2Q96IV6 333 aa26.94■■□□□ 1.9
SHOX2-201ENST00000389589 ADPGKQ9BRR6 497 aa26.94■■□□□ 1.9
SHOX2-201ENST00000389589 AP5M1Q9H0R1 490 aa26.94■■□□□ 1.9
SHOX2-201ENST00000389589 CARD9Q9H257 536 aa26.94■■□□□ 1.9
SHOX2-201ENST00000389589 CNOT8Q9UFF9 292 aaKnown RBP26.94■■□□□ 1.9
SHOX2-201ENST00000389589 L1RE1Q9UN81 338 aa26.94■■□□□ 1.9
SHOX2-201ENST00000389589 TLL2Q9Y6L7 1015 aa26.94■■□□□ 1.9
SHOX2-201ENST00000389589 A0A1B0GUA9 196 aa26.93■■□□□ 1.9
SHOX2-201ENST00000389589 TNPO2O14787 897 aaKnown RBP26.93■■□□□ 1.9
SHOX2-201ENST00000389589 NSFP46459 744 aaKnown RBP26.93■■□□□ 1.9
SHOX2-201ENST00000389589 YWHAEP62258 255 aaKnown RBP26.93■■□□□ 1.9
SHOX2-201ENST00000389589 TMEM192Q8IY95 271 aa26.93■■□□□ 1.9
SHOX2-201ENST00000389589 MCOLN2Q8IZK6 566 aa26.93■■□□□ 1.9
SHOX2-201ENST00000389589 SMIM35A0A1B0GVV1 85 aa26.93■■□□□ 1.9
SHOX2-201ENST00000389589 DCAF8L1A6NGE4 600 aa26.93■■□□□ 1.9
SHOX2-201ENST00000389589 LACTBL1A8MY62 500 aa26.93■■□□□ 1.9
SHOX2-201ENST00000389589 FAM155AB1AL88 458 aaPredicted RBP26.93■■□□□ 1.9
SHOX2-201ENST00000389589 CALCAP01258 141 aa26.93■■□□□ 1.9
SHOX2-201ENST00000389589 MFSD10Q14728 455 aa26.93■■□□□ 1.9
SHOX2-201ENST00000389589 APBB1IPQ7Z5R6 666 aaPredicted RBP26.93■■□□□ 1.9
SHOX2-201ENST00000389589 UBL4BQ8N7F7 174 aa26.93■■□□□ 1.9
SHOX2-201ENST00000389589 XYLT2Q9H1B5 865 aa26.93■■□□□ 1.9
SHOX2-201ENST00000389589 STIM2Q9P246 746 aa26.93■■□□□ 1.9
SHOX2-201ENST00000389589 NOC2LQ9Y3T9 749 aaKnown RBP26.93■■□□□ 1.9
SHOX2-201ENST00000389589 MBLAC1A4D2B0 266 aaPredicted RBP26.92■■□□□ 1.9
SHOX2-201ENST00000389589 ATMINO43313 823 aaPredicted RBP26.92■■□□□ 1.9
SHOX2-201ENST00000389589 IGHA2P01877 340 aa26.92■■□□□ 1.9
SHOX2-201ENST00000389589 RNASE9P60153 205 aaKnown RBP26.92■■□□□ 1.9
SHOX2-201ENST00000389589 PCBP1Q15365 356 aaKnown RBP eCLIP26.92■■□□□ 1.9
SHOX2-201ENST00000389589 CCNI2Q6ZMN8 369 aaPredicted RBP26.92■■□□□ 1.9
SHOX2-201ENST00000389589 GCOM2Q9BZD3 368 aaPredicted RBP26.92■■□□□ 1.9
SHOX2-201ENST00000389589 THAP12O43422 761 aa26.91■■□□□ 1.9
SHOX2-201ENST00000389589 MESDQ14696 234 aa26.91■■□□□ 1.9
SHOX2-201ENST00000389589 SCARA3Q6AZY7 606 aa26.91■■□□□ 1.9
SHOX2-201ENST00000389589 VCPIP1Q96JH7 1222 aa26.91■■□□□ 1.9
SHOX2-201ENST00000389589 ADAMTS10Q9H324 1103 aa26.91■■□□□ 1.9
SHOX2-201ENST00000389589 CCDC188H7C350 402 aa26.91■■□□□ 1.9
SHOX2-201ENST00000389589 MAP2K7O14733 419 aa26.91■■□□□ 1.9
SHOX2-201ENST00000389589 CRHR2Q13324 411 aa26.91■■□□□ 1.9
SHOX2-201ENST00000389589 DCAF4L1Q3SXM0 396 aa26.91■■□□□ 1.9
SHOX2-201ENST00000389589 NAA35Q5VZE5 725 aa26.91■■□□□ 1.9
SHOX2-201ENST00000389589 CYFIP2Q96F07 1278 aa26.91■■□□□ 1.9
SHOX2-201ENST00000389589 NAP1L3Q99457 506 aaPredicted RBP26.91■■□□□ 1.9
SHOX2-201ENST00000389589 WNT8AQ9H1J5 351 aa26.91■■□□□ 1.9
SHOX2-201ENST00000389589 CISHQ9NSE2 258 aa26.91■■□□□ 1.9
SHOX2-201ENST00000389589 HAS3O00219 553 aa26.9■■□□□ 1.9
SHOX2-201ENST00000389589 SASH3O75995 380 aa26.9■■□□□ 1.9
SHOX2-201ENST00000389589 NFICP08651 508 aa26.9■■□□□ 1.9
SHOX2-201ENST00000389589 PSEN2P49810 448 aa26.9■■□□□ 1.9
SHOX2-201ENST00000389589 CPA5Q8WXQ8 436 aa26.9■■□□□ 1.9
SHOX2-201ENST00000389589 DMGDHQ9UI17 866 aaKnown RBP26.9■■□□□ 1.9
SHOX2-201ENST00000389589 RALGAPA2Q2PPJ7 1873 aa26.9■■□□□ 1.9
SHOX2-201ENST00000389589 KIZQ2M2Z5 673 aa26.89■■□□□ 1.9
SHOX2-201ENST00000389589 LIN9Q5TKA1 542 aa26.89■■□□□ 1.9
SHOX2-201ENST00000389589 JADE1Q6IE81 842 aa26.89■■□□□ 1.9
SHOX2-201ENST00000389589 NT5DC4Q86YG4 428 aa26.89■■□□□ 1.9
SHOX2-201ENST00000389589 CD302Q8IX05 232 aa26.89■■□□□ 1.9
SHOX2-201ENST00000389589 HDAC7Q8WUI4 952 aa26.89■■□□□ 1.9
SHOX2-201ENST00000389589 KRT12Q99456 494 aa26.89■■□□□ 1.9
SHOX2-201ENST00000389589 KATNAL1Q9BW62 490 aa26.89■■□□□ 1.9
SHOX2-201ENST00000389589 FAM49AQ9H0Q0 323 aaPredicted RBP26.89■■□□□ 1.9
SHOX2-201ENST00000389589 TMEM110-MUSTN1A8MSY1 372 aa26.89■■□□□ 1.89
SHOX2-201ENST00000389589 CYP2C9P11712 490 aa26.89■■□□□ 1.89
SHOX2-201ENST00000389589 COMTP21964 271 aa26.89■■□□□ 1.89
SHOX2-201ENST00000389589 TNFRSF8P28908 595 aa26.89■■□□□ 1.89
SHOX2-201ENST00000389589 ASPAP45381 313 aa26.89■■□□□ 1.89
SHOX2-201ENST00000389589 TM4SF4P48230 202 aa26.89■■□□□ 1.89
SHOX2-201ENST00000389589 NOMO3P69849 1222 aa26.89■■□□□ 1.89
SHOX2-201ENST00000389589 SLC10A6Q3KNW5 377 aa26.89■■□□□ 1.89
SHOX2-201ENST00000389589 PHF13Q86YI8 300 aaPredicted RBP26.89■■□□□ 1.89
SHOX2-201ENST00000389589 ZNF606Q8WXB4 792 aa26.89■■□□□ 1.89
SHOX2-201ENST00000389589 ACAP3Q96P50 834 aa26.89■■□□□ 1.89
SHOX2-201ENST00000389589 ZSWIM1Q9BR11 485 aa26.89■■□□□ 1.89
SHOX2-201ENST00000389589 MROH7Q68CQ1 1323 aa26.89■■□□□ 1.89
SHOX2-201ENST00000389589 TRIP12Q14669 1992 aaPredicted RBP26.88■■□□□ 1.89
SHOX2-201ENST00000389589 GPR32O75388 356 aa26.88■■□□□ 1.89
SHOX2-201ENST00000389589 KRT19P08727 400 aa26.88■■□□□ 1.89
SHOX2-201ENST00000389589 ATICP31939 592 aa26.88■■□□□ 1.89
SHOX2-201ENST00000389589 ZNF667Q5HYK9 610 aa26.88■■□□□ 1.89
SHOX2-201ENST00000389589 MON1BQ7L1V2 547 aa26.88■■□□□ 1.89
SHOX2-201ENST00000389589 C1orf127Q8N9H9 656 aa26.88■■□□□ 1.89
SHOX2-201ENST00000389589 LENG1Q96BZ8 264 aaPredicted RBP26.88■■□□□ 1.89
SHOX2-201ENST00000389589 CHORDC1Q9UHD1 332 aaPredicted RBP26.88■■□□□ 1.89
SHOX2-201ENST00000389589 SIX4Q9UIU6 781 aa26.88■■□□□ 1.89
SHOX2-201ENST00000389589 KRIT1O00522 736 aa26.88■■□□□ 1.89
SHOX2-201ENST00000389589 ZMYND10O75800 440 aa26.88■■□□□ 1.89
SHOX2-201ENST00000389589 MYL3P08590 195 aa26.88■■□□□ 1.89
SHOX2-201ENST00000389589 CD58P19256 250 aa26.88■■□□□ 1.89
SHOX2-201ENST00000389589 GRM5P41594 1212 aa26.88■■□□□ 1.89
SHOX2-201ENST00000389589 CBX1P83916 185 aa26.88■■□□□ 1.89
SHOX2-201ENST00000389589 C2CD2Q9Y426 696 aa26.88■■□□□ 1.89
SHOX2-201ENST00000389589 MEFVO15553 781 aaPredicted RBP26.87■■□□□ 1.89
SHOX2-201ENST00000389589 ADAM17P78536 824 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms