RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 SCYL3Q8IZE3 742 aa15.54■□□□□ 0.08
VPS9D1-201ENST00000389386 RIBC1Q8N443 379 aaPredicted RBP15.54■□□□□ 0.08
VPS9D1-201ENST00000389386 SNF8Q96H20 258 aa15.54■□□□□ 0.08
VPS9D1-201ENST00000389386 STK33Q9BYT3 514 aa15.54■□□□□ 0.08
VPS9D1-201ENST00000389386 NPHS2Q9NP85 383 aa15.54■□□□□ 0.08
VPS9D1-201ENST00000389386 ASIC3Q9UHC3 531 aa15.54■□□□□ 0.08
VPS9D1-201ENST00000389386 CHMP2BQ9UQN3 213 aa15.54■□□□□ 0.08
VPS9D1-201ENST00000389386 NRXN2Q9P2S2 1712 aa15.54■□□□□ 0.08
VPS9D1-201ENST00000389386 hCG_2014768A0A024R1R8 64 aa15.53■□□□□ 0.08
VPS9D1-201ENST00000389386 GTPBP10A4D1E9 387 aaKnown RBP15.53■□□□□ 0.08
VPS9D1-201ENST00000389386 A8MXQ7 604 aa15.53■□□□□ 0.08
VPS9D1-201ENST00000389386 FGFR1P11362 822 aa15.53■□□□□ 0.08
VPS9D1-201ENST00000389386 TNFAIP3P21580 790 aa15.53■□□□□ 0.08
VPS9D1-201ENST00000389386 COMTP21964 271 aa15.53■□□□□ 0.08
VPS9D1-201ENST00000389386 HOXD13P35453 343 aa15.53■□□□□ 0.08
VPS9D1-201ENST00000389386 PPP2R5CQ13362 524 aa15.53■□□□□ 0.08
VPS9D1-201ENST00000389386 DRAP1Q14919 205 aaPredicted RBP15.53■□□□□ 0.08
VPS9D1-201ENST00000389386 RINLQ6ZS11 566 aa15.53■□□□□ 0.08
VPS9D1-201ENST00000389386 NME8Q8N427 588 aa15.53■□□□□ 0.08
VPS9D1-201ENST00000389386 FNBP1Q96RU3 617 aa15.53■□□□□ 0.08
VPS9D1-201ENST00000389386 SLX1AQ9BQ83 275 aa15.53■□□□□ 0.08
VPS9D1-201ENST00000389386 PHACTR1Q9C0D0 580 aa15.53■□□□□ 0.08
VPS9D1-201ENST00000389386 ZC3H12CQ9C0D7 883 aaKnown RBP15.53■□□□□ 0.08
VPS9D1-201ENST00000389386 DBNDD1Q9H9R9 158 aa15.53■□□□□ 0.08
VPS9D1-201ENST00000389386 TAS2R1Q9NYW7 299 aa15.53■□□□□ 0.08
VPS9D1-201ENST00000389386 CFAP69A5D8W1 941 aa15.53■□□□□ 0.08
VPS9D1-201ENST00000389386 E9PMD0 336 aa15.53■□□□□ 0.08
VPS9D1-201ENST00000389386 AMPD1P23109 780 aa15.53■□□□□ 0.08
VPS9D1-201ENST00000389386 CRABP2P29373 138 aa15.53■□□□□ 0.08
VPS9D1-201ENST00000389386 RNF207Q6ZRF8 634 aa15.53■□□□□ 0.08
VPS9D1-201ENST00000389386 PDCD7Q8N8D1 485 aaKnown RBP15.53■□□□□ 0.08
VPS9D1-201ENST00000389386 PPP2R3CQ969Q6 453 aa15.53■□□□□ 0.08
VPS9D1-201ENST00000389386 PIGSQ96S52 555 aa15.53■□□□□ 0.08
VPS9D1-201ENST00000389386 LZTS2Q9BRK4 669 aa15.53■□□□□ 0.08
VPS9D1-201ENST00000389386 YIPF2Q9BWQ6 316 aa15.53■□□□□ 0.08
VPS9D1-201ENST00000389386 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.53■□□□□ 0.08
VPS9D1-201ENST00000389386 ROBO3Q96MS0 1386 aa15.53■□□□□ 0.08
VPS9D1-201ENST00000389386 SLX4Q8IY92 1834 aa15.53■□□□□ 0.08
VPS9D1-201ENST00000389386 ATP9BO43861 1147 aa15.52■□□□□ 0.08
VPS9D1-201ENST00000389386 RAD21O60216 631 aa15.52■□□□□ 0.08
VPS9D1-201ENST00000389386 HAUS5O94927 633 aa15.52■□□□□ 0.08
VPS9D1-201ENST00000389386 RPL13P26373 211 aaKnown RBP15.52■□□□□ 0.08
VPS9D1-201ENST00000389386 RPA3P35244 121 aaPredicted RBP15.52■□□□□ 0.08
VPS9D1-201ENST00000389386 TCEAL1Q15170 157 aa15.52■□□□□ 0.08
VPS9D1-201ENST00000389386 SLC1A5Q15758 541 aa15.52■□□□□ 0.08
VPS9D1-201ENST00000389386 GPBP1Q86WP2 473 aa15.52■□□□□ 0.08
VPS9D1-201ENST00000389386 ZNF75CPQ92670 426 aaPredicted RBP15.52■□□□□ 0.08
VPS9D1-201ENST00000389386 CD101Q93033 1021 aa15.52■□□□□ 0.08
VPS9D1-201ENST00000389386 MPP4Q96JB8 637 aa15.52■□□□□ 0.08
VPS9D1-201ENST00000389386 AGBL1Q96MI9 1066 aa15.52■□□□□ 0.08
VPS9D1-201ENST00000389386 WNT8AQ9H1J5 351 aa15.52■□□□□ 0.08
VPS9D1-201ENST00000389386 ZMYM2Q9UBW7 1377 aa15.52■□□□□ 0.08
VPS9D1-201ENST00000389386 DDX60LQ5H9U9 1706 aaKnown RBP15.52■□□□□ 0.08
VPS9D1-201ENST00000389386 G3V3G9 751 aa15.52■□□□□ 0.08
VPS9D1-201ENST00000389386 PLA2G4BP0C869 781 aa15.52■□□□□ 0.08
VPS9D1-201ENST00000389386 AKR1B1P15121 316 aa15.52■□□□□ 0.08
VPS9D1-201ENST00000389386 ANPEPP15144 967 aa15.52■□□□□ 0.08
VPS9D1-201ENST00000389386 GRIA2P42262 883 aa15.52■□□□□ 0.08
VPS9D1-201ENST00000389386 CASP4P49662 377 aa15.52■□□□□ 0.08
VPS9D1-201ENST00000389386 HPCAP84074 193 aa15.52■□□□□ 0.08
VPS9D1-201ENST00000389386 NR1H3Q13133 447 aa15.52■□□□□ 0.08
VPS9D1-201ENST00000389386 KNOP1Q1ED39 458 aaKnown RBP15.52■□□□□ 0.08
VPS9D1-201ENST00000389386 SHROOM1Q2M3G4 852 aaPredicted RBP15.52■□□□□ 0.08
VPS9D1-201ENST00000389386 DCAF8Q5TAQ9 597 aa15.52■□□□□ 0.08
VPS9D1-201ENST00000389386 DDX27Q96GQ7 796 aaKnown RBP15.52■□□□□ 0.08
VPS9D1-201ENST00000389386 GPR88Q9GZN0 384 aa15.52■□□□□ 0.08
VPS9D1-201ENST00000389386 TRABDQ9H4I3 376 aa15.52■□□□□ 0.08
VPS9D1-201ENST00000389386 SEPT11Q9NVA2 429 aaKnown RBP15.52■□□□□ 0.08
VPS9D1-201ENST00000389386 C10orf71Q711Q0 1435 aa15.52■□□□□ 0.07
VPS9D1-201ENST00000389386 CYP11B2P19099 503 aa15.52■□□□□ 0.07
VPS9D1-201ENST00000389386 MAP3K10Q02779 954 aa15.52■□□□□ 0.07
VPS9D1-201ENST00000389386 HYIQ5T013 277 aa15.52■□□□□ 0.07
VPS9D1-201ENST00000389386 FYB2Q5VWT5 728 aa15.52■□□□□ 0.07
VPS9D1-201ENST00000389386 NEDD1Q8NHV4 660 aa15.52■□□□□ 0.07
VPS9D1-201ENST00000389386 RFWD2Q8NHY2 731 aa15.52■□□□□ 0.07
VPS9D1-201ENST00000389386 C1orf54Q8WWF1 131 aa15.52■□□□□ 0.07
VPS9D1-201ENST00000389386 UIMC1Q96RL1 719 aa15.52■□□□□ 0.07
VPS9D1-201ENST00000389386 GPCPD1Q9NPB8 672 aa15.52■□□□□ 0.07
VPS9D1-201ENST00000389386 DCTN4Q9UJW0 460 aa15.52■□□□□ 0.07
VPS9D1-201ENST00000389386 ANAPC5Q9UJX4 755 aa15.52■□□□□ 0.07
VPS9D1-201ENST00000389386 DNAJC12Q9UKB3 198 aa15.52■□□□□ 0.07
VPS9D1-201ENST00000389386 SUGT1Q9Y2Z0 365 aa15.52■□□□□ 0.07
VPS9D1-201ENST00000389386 A0A0J9YVX5 310 aa15.51■□□□□ 0.07
VPS9D1-201ENST00000389386 PIM1P11309 404 aaPredicted RBP15.51■□□□□ 0.07
VPS9D1-201ENST00000389386 CAV1Q03135 178 aa15.51■□□□□ 0.07
VPS9D1-201ENST00000389386 MESDQ14696 234 aa15.51■□□□□ 0.07
VPS9D1-201ENST00000389386 NMD3Q96D46 503 aaKnown RBP15.51■□□□□ 0.07
VPS9D1-201ENST00000389386 ZHX3Q9H4I2 956 aa15.51■□□□□ 0.07
VPS9D1-201ENST00000389386 HEY2Q9UBP5 337 aa15.51■□□□□ 0.07
VPS9D1-201ENST00000389386 SMG5Q9UPR3 1016 aaKnown RBP15.51■□□□□ 0.07
VPS9D1-201ENST00000389386 SMIM31A0A1B0GVY4 71 aa15.51■□□□□ 0.07
VPS9D1-201ENST00000389386 F8W8V4 182 aa15.51■□□□□ 0.07
VPS9D1-201ENST00000389386 GCAP28676 217 aa15.51■□□□□ 0.07
VPS9D1-201ENST00000389386 SERPINB3P29508 390 aa15.51■□□□□ 0.07
VPS9D1-201ENST00000389386 RAP1GDS1P52306 607 aa15.51■□□□□ 0.07
VPS9D1-201ENST00000389386 TCP10Q12799 353 aa15.51■□□□□ 0.07
VPS9D1-201ENST00000389386 NFIAQ12857 509 aa15.51■□□□□ 0.07
VPS9D1-201ENST00000389386 CDC16Q13042 620 aa15.51■□□□□ 0.07
VPS9D1-201ENST00000389386 HNRNPDQ14103 355 aaKnown RBP15.51■□□□□ 0.07
VPS9D1-201ENST00000389386 ARSHQ5FYA8 562 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms