RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 MAP2K5Q13163 448 aa10.87□□□□□ -0.67
LTN1-203ENST00000389195 TRPC3Q13507 836 aa10.87□□□□□ -0.67
LTN1-203ENST00000389195 CXCL17Q6UXB2 119 aa10.87□□□□□ -0.67
LTN1-203ENST00000389195 TSHZ1Q6ZSZ6 1077 aa10.87□□□□□ -0.67
LTN1-203ENST00000389195 BRSK2Q8IWQ3 736 aa10.87□□□□□ -0.67
LTN1-203ENST00000389195 C1orf127Q8N9H9 656 aa10.87□□□□□ -0.67
LTN1-203ENST00000389195 MSANTD4Q8NCY6 345 aa10.87□□□□□ -0.67
LTN1-203ENST00000389195 C18orf25Q96B23 403 aaPredicted RBP10.87□□□□□ -0.67
LTN1-203ENST00000389195 SDCBP2Q9H190 292 aa10.87□□□□□ -0.67
LTN1-203ENST00000389195 ISCUQ9H1K1 167 aa10.87□□□□□ -0.67
LTN1-203ENST00000389195 CISHQ9NSE2 258 aa10.87□□□□□ -0.67
LTN1-203ENST00000389195 SNTG2Q9NY99 539 aa10.87□□□□□ -0.67
LTN1-203ENST00000389195 NFU1Q9UMS0 254 aa10.87□□□□□ -0.67
LTN1-203ENST00000389195 STXBP5LQ9Y2K9 1186 aa10.87□□□□□ -0.67
LTN1-203ENST00000389195 PIGRP01833 764 aa10.86□□□□□ -0.67
LTN1-203ENST00000389195 CLTAP09496 248 aa10.86□□□□□ -0.67
LTN1-203ENST00000389195 CD19P15391 556 aa10.86□□□□□ -0.67
LTN1-203ENST00000389195 AFF1P51825 1210 aaKnown RBP10.86□□□□□ -0.67
LTN1-203ENST00000389195 SNRPFP62306 86 aaKnown RBP10.86□□□□□ -0.67
LTN1-203ENST00000389195 CCDC142Q17RM4 750 aa10.86□□□□□ -0.67
LTN1-203ENST00000389195 MORN1Q5T089 497 aa10.86□□□□□ -0.67
LTN1-203ENST00000389195 C12orf29Q8N999 325 aa10.86□□□□□ -0.67
LTN1-203ENST00000389195 ZNF564Q8TBZ8 553 aaPredicted RBP10.86□□□□□ -0.67
LTN1-203ENST00000389195 ZMAT2Q96NC0 199 aaKnown RBP10.86□□□□□ -0.67
LTN1-203ENST00000389195 AMFRQ9UKV5 643 aa10.86□□□□□ -0.67
LTN1-203ENST00000389195 H0YCG3 227 aa10.86□□□□□ -0.67
LTN1-203ENST00000389195 KRIT1O00522 736 aa10.86□□□□□ -0.67
LTN1-203ENST00000389195 DDX3YO15523 660 aaKnown RBP10.86□□□□□ -0.67
LTN1-203ENST00000389195 TSPAN1O60635 241 aa10.86□□□□□ -0.67
LTN1-203ENST00000389195 RTN2O75298 545 aa10.86□□□□□ -0.67
LTN1-203ENST00000389195 NPTXRO95502 500 aa10.86□□□□□ -0.67
LTN1-203ENST00000389195 PYGMP11217 842 aa10.86□□□□□ -0.67
LTN1-203ENST00000389195 SCP2P22307 547 aa10.86□□□□□ -0.67
LTN1-203ENST00000389195 MAPK4P31152 587 aa10.86□□□□□ -0.67
LTN1-203ENST00000389195 KCNJ1P48048 391 aa10.86□□□□□ -0.67
LTN1-203ENST00000389195 DUOXA2Q1HG44 320 aa10.86□□□□□ -0.67
LTN1-203ENST00000389195 C8orf74Q6P047 294 aa10.86□□□□□ -0.67
LTN1-203ENST00000389195 ZPBP2Q6X784 338 aa10.86□□□□□ -0.67
LTN1-203ENST00000389195 USP38Q8NB14 1042 aa10.86□□□□□ -0.67
LTN1-203ENST00000389195 C1orf131Q8NDD1 294 aaKnown RBP10.86□□□□□ -0.67
LTN1-203ENST00000389195 TMEM174Q8WUU8 243 aa10.86□□□□□ -0.67
LTN1-203ENST00000389195 ZNF606Q8WXB4 792 aa10.86□□□□□ -0.67
LTN1-203ENST00000389195 HEMGNQ9BXL5 484 aa10.86□□□□□ -0.67
LTN1-203ENST00000389195 NXF3Q9H4D5 531 aaKnown RBP10.86□□□□□ -0.67
LTN1-203ENST00000389195 RPF1Q9H9Y2 349 aaKnown RBP10.86□□□□□ -0.67
LTN1-203ENST00000389195 ANAPC7Q9UJX3 599 aa10.86□□□□□ -0.67
LTN1-203ENST00000389195 GNEQ9Y223 722 aaKnown RBP10.86□□□□□ -0.67
LTN1-203ENST00000389195 ZC3H4Q9UPT8 1303 aaKnown RBP10.86□□□□□ -0.67
LTN1-203ENST00000389195 ERLIN2O94905 339 aa10.86□□□□□ -0.67
LTN1-203ENST00000389195 HEXIM1O94992 359 aaKnown RBP10.86□□□□□ -0.67
LTN1-203ENST00000389195 PROZP22891 400 aa10.86□□□□□ -0.67
LTN1-203ENST00000389195 POLR2BP30876 1174 aaKnown RBP10.86□□□□□ -0.67
LTN1-203ENST00000389195 HOXA11P31270 313 aaPredicted RBP10.86□□□□□ -0.67
LTN1-203ENST00000389195 SKIDA1Q1XH10 827 aa10.86□□□□□ -0.67
LTN1-203ENST00000389195 ZNF699Q32M78 642 aa10.86□□□□□ -0.67
LTN1-203ENST00000389195 C17orf99Q6UX52 265 aa10.86□□□□□ -0.67
LTN1-203ENST00000389195 USP37Q86T82 979 aa10.86□□□□□ -0.67
LTN1-203ENST00000389195 PRUNE1Q86TP1 453 aa10.86□□□□□ -0.67
LTN1-203ENST00000389195 WNT8BQ93098 351 aa10.86□□□□□ -0.67
LTN1-203ENST00000389195 HERPUD2Q9BSE4 406 aa10.86□□□□□ -0.67
LTN1-203ENST00000389195 TRIM51Q9BSJ1 452 aa10.86□□□□□ -0.67
LTN1-203ENST00000389195 XYLT2Q9H1B5 865 aa10.86□□□□□ -0.67
LTN1-203ENST00000389195 DPH5Q9H2P9 285 aa10.86□□□□□ -0.67
LTN1-203ENST00000389195 SLC5A4Q9NY91 659 aa10.86□□□□□ -0.67
LTN1-203ENST00000389195 RAB21Q9UL25 225 aa10.86□□□□□ -0.67
LTN1-203ENST00000389195 L1RE1Q9UN81 338 aa10.86□□□□□ -0.67
LTN1-203ENST00000389195 CCDC151A5D8V7 595 aa10.85□□□□□ -0.67
LTN1-203ENST00000389195 FAM155AB1AL88 458 aaPredicted RBP10.85□□□□□ -0.67
LTN1-203ENST00000389195 TTI1O43156 1089 aa10.85□□□□□ -0.67
LTN1-203ENST00000389195 SPOPO43791 374 aa10.85□□□□□ -0.67
LTN1-203ENST00000389195 LDHAP00338 332 aaKnown RBP10.85□□□□□ -0.67
LTN1-203ENST00000389195 ASS1P00966 412 aaKnown RBP10.85□□□□□ -0.67
LTN1-203ENST00000389195 CCDC172P0C7W6 258 aa10.85□□□□□ -0.67
LTN1-203ENST00000389195 CYP2C9P11712 490 aa10.85□□□□□ -0.67
LTN1-203ENST00000389195 PHKA2P46019 1235 aa10.85□□□□□ -0.67
LTN1-203ENST00000389195 GCNT1Q02742 428 aa10.85□□□□□ -0.67
LTN1-203ENST00000389195 CKAP4Q07065 602 aaKnown RBP10.85□□□□□ -0.67
LTN1-203ENST00000389195 SNX1Q13596 522 aa10.85□□□□□ -0.67
LTN1-203ENST00000389195 TFDP1Q14186 410 aa10.85□□□□□ -0.67
LTN1-203ENST00000389195 CASP8Q14790 479 aa10.85□□□□□ -0.67
LTN1-203ENST00000389195 FAM47CQ5HY64 1035 aa10.85□□□□□ -0.67
LTN1-203ENST00000389195 ANKS1BQ7Z6G8 1248 aa10.85□□□□□ -0.67
LTN1-203ENST00000389195 HES6Q96HZ4 224 aa10.85□□□□□ -0.67
LTN1-203ENST00000389195 RNPC3Q96LT9 517 aaKnown RBP10.85□□□□□ -0.67
LTN1-203ENST00000389195 KIAA1586Q9HCI6 787 aa10.85□□□□□ -0.67
LTN1-203ENST00000389195 AGAP1Q9UPQ3 857 aa10.85□□□□□ -0.67
LTN1-203ENST00000389195 PTPN22Q9Y2R2 807 aa10.85□□□□□ -0.67
LTN1-203ENST00000389195 SCN1AP35498 2009 aa10.85□□□□□ -0.67
LTN1-203ENST00000389195 UNGP13051 313 aaPredicted RBP10.85□□□□□ -0.67
LTN1-203ENST00000389195 FLT3P36888 993 aa10.85□□□□□ -0.67
LTN1-203ENST00000389195 RABGGTBP53611 331 aa10.85□□□□□ -0.67
LTN1-203ENST00000389195 FKBP1BP68106 108 aa10.85□□□□□ -0.67
LTN1-203ENST00000389195 CLEC16AQ2KHT3 1053 aa10.85□□□□□ -0.67
LTN1-203ENST00000389195 RAB6CQ53S08 254 aa10.85□□□□□ -0.67
LTN1-203ENST00000389195 ZNF484Q5JVG2 852 aa10.85□□□□□ -0.67
LTN1-203ENST00000389195 GNASQ5JWF2 1037 aa10.85□□□□□ -0.67
LTN1-203ENST00000389195 C10orf76Q5T2E6 689 aa10.85□□□□□ -0.67
LTN1-203ENST00000389195 ACAD10Q6JQN1 1059 aa10.85□□□□□ -0.67
LTN1-203ENST00000389195 SND1Q7KZF4 910 aaKnown RBP eCLIP10.85□□□□□ -0.67
LTN1-203ENST00000389195 CATSPER4Q7RTX7 472 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms