RNA–Protein interactions for RNA: ENST00000381873.7

SNPH-202, Transcript of syntaphilin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNPH, Length 4,995 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-202ENST00000381873 PBXIP1Q96AQ6 731 aa15.67■□□□□ 0.1
SNPH-202ENST00000381873 AGAP3Q96P47 875 aa15.67■□□□□ 0.1
SNPH-202ENST00000381873 LRRC37BQ96QE4 947 aa15.67■□□□□ 0.1
SNPH-202ENST00000381873 EHD4Q9H223 541 aa15.67■□□□□ 0.1
SNPH-202ENST00000381873 SALL3Q9BXA9 1300 aa15.67■□□□□ 0.1
SNPH-202ENST00000381873 PRRG1O14668 218 aa15.67■□□□□ 0.1
SNPH-202ENST00000381873 SMAD1Q15797 465 aaKnown RBP15.67■□□□□ 0.1
SNPH-202ENST00000381873 RASSF3Q86WH2 238 aa15.67■□□□□ 0.1
SNPH-202ENST00000381873 CENPKQ9BS16 269 aa15.67■□□□□ 0.1
SNPH-202ENST00000381873 TRPC7Q9HCX4 862 aa15.67■□□□□ 0.1
SNPH-202ENST00000381873 ZFP69BQ9UJL9 534 aa15.67■□□□□ 0.1
SNPH-202ENST00000381873 FBXL5Q9UKA1 691 aa15.67■□□□□ 0.1
SNPH-202ENST00000381873 PCDHGB4Q9UN71 923 aa15.67■□□□□ 0.1
SNPH-202ENST00000381873 IL1R1P14778 569 aa15.67■□□□□ 0.1
SNPH-202ENST00000381873 TROAPQ12815 778 aa15.67■□□□□ 0.1
SNPH-202ENST00000381873 TRAPPC11Q7Z392 1133 aa15.67■□□□□ 0.1
SNPH-202ENST00000381873 FBXO28Q9NVF7 368 aa15.67■□□□□ 0.1
SNPH-202ENST00000381873 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.67■□□□□ 0.1
SNPH-202ENST00000381873 GMNCA6NCL1 334 aa15.66■□□□□ 0.1
SNPH-202ENST00000381873 EIF3DO15371 548 aaKnown RBP eCLIP15.66■□□□□ 0.1
SNPH-202ENST00000381873 FXR2P51116 673 aaKnown RBP eCLIP15.66■□□□□ 0.1
SNPH-202ENST00000381873 FAM117BQ6P1L5 589 aa15.66■□□□□ 0.1
SNPH-202ENST00000381873 GPRASP2Q96D09 838 aa15.66■□□□□ 0.1
SNPH-202ENST00000381873 ZDHHC15Q96MV8 337 aa15.66■□□□□ 0.1
SNPH-202ENST00000381873 TMEM8AQ9HCN3 771 aa15.66■□□□□ 0.1
SNPH-202ENST00000381873 TUBE1Q9UJT0 475 aa15.66■□□□□ 0.1
SNPH-202ENST00000381873 PPP2R3BQ9Y5P8 575 aa15.66■□□□□ 0.1
SNPH-202ENST00000381873 CELF2O95319 508 aaKnown RBP15.66■□□□□ 0.1
SNPH-202ENST00000381873 KCNA1Q09470 495 aa15.66■□□□□ 0.1
SNPH-202ENST00000381873 ANO4Q32M45 955 aa15.66■□□□□ 0.1
SNPH-202ENST00000381873 SLC35G2Q8TBE7 412 aa15.66■□□□□ 0.1
SNPH-202ENST00000381873 CYP11B2P19099 503 aa15.66■□□□□ 0.1
SNPH-202ENST00000381873 SV2CQ496J9 727 aa15.66■□□□□ 0.1
SNPH-202ENST00000381873 SYDE1Q6ZW31 735 aaPredicted RBP15.66■□□□□ 0.1
SNPH-202ENST00000381873 SPATA17Q96L03 361 aa15.66■□□□□ 0.1
SNPH-202ENST00000381873 SENP2Q9HC62 589 aa15.66■□□□□ 0.1
SNPH-202ENST00000381873 RAB6BQ9NRW1 208 aa15.66■□□□□ 0.1
SNPH-202ENST00000381873 CFAP69A5D8W1 941 aa15.66■□□□□ 0.1
SNPH-202ENST00000381873 ACADSBP45954 432 aa15.66■□□□□ 0.1
SNPH-202ENST00000381873 SLC26A7Q8TE54 656 aa15.66■□□□□ 0.1
SNPH-202ENST00000381873 PABPC5Q96DU9 382 aaKnown RBP15.66■□□□□ 0.1
SNPH-202ENST00000381873 TAAR1Q96RJ0 339 aa15.66■□□□□ 0.1
SNPH-202ENST00000381873 NIF3L1Q9GZT8 377 aa15.66■□□□□ 0.1
SNPH-202ENST00000381873 FAM49BQ9NUQ9 324 aa15.66■□□□□ 0.1
SNPH-202ENST00000381873 P4HA2O15460 535 aa15.65■□□□□ 0.1
SNPH-202ENST00000381873 KCNA2P16389 499 aa15.65■□□□□ 0.1
SNPH-202ENST00000381873 SLC9A1P19634 815 aa15.65■□□□□ 0.1
SNPH-202ENST00000381873 PEX19P40855 299 aa15.65■□□□□ 0.1
SNPH-202ENST00000381873 EFTUD2Q15029 972 aaKnown RBP eCLIP15.65■□□□□ 0.1
SNPH-202ENST00000381873 UGP2Q16851 508 aa15.65■□□□□ 0.1
SNPH-202ENST00000381873 TEDDM1Q5T9Z0 273 aa15.65■□□□□ 0.1
SNPH-202ENST00000381873 KDELC2Q7Z4H8 507 aa15.65■□□□□ 0.1
SNPH-202ENST00000381873 C17orf75Q9HAS0 396 aa15.65■□□□□ 0.1
SNPH-202ENST00000381873 AGPAT5Q9NUQ2 364 aa15.65■□□□□ 0.1
SNPH-202ENST00000381873 CCDC195A0A1B0GUA6 201 aa15.65■□□□□ 0.1
SNPH-202ENST00000381873 PSMD3O43242 534 aa15.65■□□□□ 0.1
SNPH-202ENST00000381873 GAS2O43903 313 aaKnown RBP15.65■□□□□ 0.1
SNPH-202ENST00000381873 HMBSP08397 361 aa15.65■□□□□ 0.1
SNPH-202ENST00000381873 NLRP11P59045 1033 aaKnown RBP15.65■□□□□ 0.1
SNPH-202ENST00000381873 TBCCQ15814 346 aa15.65■□□□□ 0.1
SNPH-202ENST00000381873 P3H1Q32P28 736 aa15.65■□□□□ 0.1
SNPH-202ENST00000381873 BEND6Q5SZJ8 279 aaPredicted RBP15.65■□□□□ 0.1
SNPH-202ENST00000381873 NOTUMQ6P988 496 aa15.65■□□□□ 0.1
SNPH-202ENST00000381873 ASPSCR1Q9BZE9 553 aa15.65■□□□□ 0.1
SNPH-202ENST00000381873 TRIM45Q9H8W5 580 aaPredicted RBP15.65■□□□□ 0.1
SNPH-202ENST00000381873 FHOD1Q9Y613 1164 aa15.65■□□□□ 0.1
SNPH-202ENST00000381873 USP27XA6NNY8 438 aa15.65■□□□□ 0.1
SNPH-202ENST00000381873 GFAPP14136 432 aa15.65■□□□□ 0.1
SNPH-202ENST00000381873 GYS2P54840 703 aa15.65■□□□□ 0.1
SNPH-202ENST00000381873 SNX17Q15036 470 aa15.65■□□□□ 0.1
SNPH-202ENST00000381873 TMEM259Q4ZIN3 620 aa15.65■□□□□ 0.1
SNPH-202ENST00000381873 TRIML2Q8N7C3 387 aa15.65■□□□□ 0.1
SNPH-202ENST00000381873 TGS1Q96RS0 853 aaKnown RBP15.65■□□□□ 0.1
SNPH-202ENST00000381873 SMYD3Q9H7B4 428 aa15.65■□□□□ 0.1
SNPH-202ENST00000381873 GPBP1L1Q9HC44 474 aaPredicted RBP15.65■□□□□ 0.1
SNPH-202ENST00000381873 KLHL11Q9NVR0 708 aa15.65■□□□□ 0.1
SNPH-202ENST00000381873 PCDHB8Q9UN66 801 aa15.65■□□□□ 0.1
SNPH-202ENST00000381873 HOXA10P31260 410 aaPredicted RBP15.65■□□□□ 0.1
SNPH-202ENST00000381873 OR1G1P47890 313 aa15.65■□□□□ 0.1
SNPH-202ENST00000381873 ATPAF2Q8N5M1 289 aa15.65■□□□□ 0.1
SNPH-202ENST00000381873 PPHLN1Q8NEY8 458 aaKnown RBP15.65■□□□□ 0.1
SNPH-202ENST00000381873 MCEEQ96PE7 176 aa15.65■□□□□ 0.1
SNPH-202ENST00000381873 POLR3CQ9BUI4 534 aaPredicted RBP15.65■□□□□ 0.1
SNPH-202ENST00000381873 TMEM117Q9H0C3 514 aa15.65■□□□□ 0.1
SNPH-202ENST00000381873 CASS4Q9NQ75 786 aa15.65■□□□□ 0.1
SNPH-202ENST00000381873 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.65■□□□□ 0.1
SNPH-202ENST00000381873 ITIH6Q6UXX5 1313 aa15.65■□□□□ 0.1
SNPH-202ENST00000381873 FAM205AQ6ZU69 1335 aa15.65■□□□□ 0.1
SNPH-202ENST00000381873 ASMTLO95671 621 aa15.64■□□□□ 0.09
SNPH-202ENST00000381873 LMNAP02545 664 aaKnown RBP15.64■□□□□ 0.09
SNPH-202ENST00000381873 FDPSP14324 419 aaKnown RBP15.64■□□□□ 0.09
SNPH-202ENST00000381873 CAP2P40123 477 aa15.64■□□□□ 0.09
SNPH-202ENST00000381873 FXR1P51114 621 aaKnown RBP eCLIP15.64■□□□□ 0.09
SNPH-202ENST00000381873 SREBF2Q12772 1141 aa15.64■□□□□ 0.09
SNPH-202ENST00000381873 NAB2Q15742 525 aa15.64■□□□□ 0.09
SNPH-202ENST00000381873 MGAT5BQ3V5L5 792 aa15.64■□□□□ 0.09
SNPH-202ENST00000381873 RAB42Q8N4Z0 105 aa15.64■□□□□ 0.09
SNPH-202ENST00000381873 STKLD1Q8NE28 680 aa15.64■□□□□ 0.09
SNPH-202ENST00000381873 SCFD1Q8WVM8 642 aa15.64■□□□□ 0.09
SNPH-202ENST00000381873 SLC30A1Q9Y6M5 507 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms