RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 ZBED3Q96IU2 234 aaPredicted RBP14.7□□□□□ -0.06
SDC1-202ENST00000381150 FIZ1Q96SL8 496 aa14.7□□□□□ -0.06
SDC1-202ENST00000381150 EPAS1Q99814 870 aa14.7□□□□□ -0.06
SDC1-202ENST00000381150 NUP85Q9BW27 656 aa14.7□□□□□ -0.06
SDC1-202ENST00000381150 TMEM39BQ9GZU3 492 aa14.7□□□□□ -0.06
SDC1-202ENST00000381150 INTS2Q9H0H0 1204 aaKnown RBP14.7□□□□□ -0.06
SDC1-202ENST00000381150 DEFB129Q9H1M3 183 aa14.7□□□□□ -0.06
SDC1-202ENST00000381150 OLFML3Q9NRN5 406 aa14.7□□□□□ -0.06
SDC1-202ENST00000381150 TMOD2Q9NZR1 351 aa14.7□□□□□ -0.06
SDC1-202ENST00000381150 STOML1Q9UBI4 398 aa14.7□□□□□ -0.06
SDC1-202ENST00000381150 RABGAP1Q9Y3P9 1069 aa14.7□□□□□ -0.06
SDC1-202ENST00000381150 TGFB1I1O43294 461 aa14.7□□□□□ -0.06
SDC1-202ENST00000381150 PSMC2P35998 433 aaKnown RBP14.7□□□□□ -0.06
SDC1-202ENST00000381150 FMO5P49326 533 aa14.7□□□□□ -0.06
SDC1-202ENST00000381150 KPNB1Q14974 876 aaKnown RBP14.7□□□□□ -0.06
SDC1-202ENST00000381150 FAM182AQ5T1J6 154 aa14.7□□□□□ -0.06
SDC1-202ENST00000381150 MTMR14Q8NCE2 650 aa14.7□□□□□ -0.06
SDC1-202ENST00000381150 PHC3Q8NDX5 983 aa14.7□□□□□ -0.06
SDC1-202ENST00000381150 EZH1Q92800 747 aaPredicted RBP14.7□□□□□ -0.06
SDC1-202ENST00000381150 TTC1Q99614 292 aa14.7□□□□□ -0.06
SDC1-202ENST00000381150 AGPAT1Q99943 283 aa14.7□□□□□ -0.06
SDC1-202ENST00000381150 SH2D3AQ9BRG2 576 aa14.7□□□□□ -0.06
SDC1-202ENST00000381150 TUFT1Q9NNX1 390 aa14.7□□□□□ -0.06
SDC1-202ENST00000381150 PKD2L1Q9P0L9 805 aa14.7□□□□□ -0.06
SDC1-202ENST00000381150 WRAP73Q9P2S5 460 aaPredicted RBP14.7□□□□□ -0.06
SDC1-202ENST00000381150 A0A0A6YYK5 440 aaPredicted RBP14.7□□□□□ -0.06
SDC1-202ENST00000381150 CCDC160A6NGH7 325 aa14.7□□□□□ -0.06
SDC1-202ENST00000381150 FAM47DPA6NHR8 397 aa14.7□□□□□ -0.06
SDC1-202ENST00000381150 GYG2O15488 501 aa14.7□□□□□ -0.06
SDC1-202ENST00000381150 RTN3O95197 1032 aaPredicted RBP14.7□□□□□ -0.06
SDC1-202ENST00000381150 ZBTB48P10074 688 aaPredicted RBP14.7□□□□□ -0.06
SDC1-202ENST00000381150 CHRNB2P17787 502 aa14.7□□□□□ -0.06
SDC1-202ENST00000381150 GPC5P78333 572 aa14.7□□□□□ -0.06
SDC1-202ENST00000381150 EN1Q05925 392 aaPredicted RBP14.7□□□□□ -0.06
SDC1-202ENST00000381150 PPATQ06203 517 aa14.7□□□□□ -0.06
SDC1-202ENST00000381150 CCDC174Q6PII3 467 aa14.7□□□□□ -0.06
SDC1-202ENST00000381150 RTKN2Q8IZC4 609 aa14.7□□□□□ -0.06
SDC1-202ENST00000381150 AGGF1Q8N302 714 aaeCLIP14.7□□□□□ -0.06
SDC1-202ENST00000381150 TTLL6Q8N841 843 aa14.7□□□□□ -0.06
SDC1-202ENST00000381150 ANKLE1Q8NAG6 615 aa14.7□□□□□ -0.06
SDC1-202ENST00000381150 MAGEB18Q96M61 343 aa14.7□□□□□ -0.06
SDC1-202ENST00000381150 SERPINB12Q96P63 405 aa14.7□□□□□ -0.06
SDC1-202ENST00000381150 STK33Q9BYT3 514 aa14.7□□□□□ -0.06
SDC1-202ENST00000381150 ZNF277Q9NRM2 450 aaPredicted RBP14.7□□□□□ -0.06
SDC1-202ENST00000381150 KLHL11Q9NVR0 708 aa14.7□□□□□ -0.06
SDC1-202ENST00000381150 TTC4O95801 387 aa14.69□□□□□ -0.06
SDC1-202ENST00000381150 POLR2MP0CAP2 368 aa14.69□□□□□ -0.06
SDC1-202ENST00000381150 CAP2P40123 477 aa14.69□□□□□ -0.06
SDC1-202ENST00000381150 UBXN2AP68543 259 aa14.69□□□□□ -0.06
SDC1-202ENST00000381150 PPP1R21Q6ZMI0 780 aa14.69□□□□□ -0.06
SDC1-202ENST00000381150 MFN1Q8IWA4 741 aa14.69□□□□□ -0.06
SDC1-202ENST00000381150 CHURC1Q8WUH1 139 aa14.69□□□□□ -0.06
SDC1-202ENST00000381150 SAYSD1Q9NPB0 183 aa14.69□□□□□ -0.06
SDC1-202ENST00000381150 TYW1Q9NV66 732 aaKnown RBP14.69□□□□□ -0.06
SDC1-202ENST00000381150 FBXO28Q9NVF7 368 aa14.69□□□□□ -0.06
SDC1-202ENST00000381150 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.69□□□□□ -0.06
SDC1-202ENST00000381150 ZMYM2Q9UBW7 1377 aa14.69□□□□□ -0.06
SDC1-202ENST00000381150 C2orf71A6NGG8 1288 aa14.69□□□□□ -0.06
SDC1-202ENST00000381150 OAS1P00973 400 aaKnown RBP14.69□□□□□ -0.06
SDC1-202ENST00000381150 IFNB1P01574 187 aa14.69□□□□□ -0.06
SDC1-202ENST00000381150 MARK3P27448 753 aa14.69□□□□□ -0.06
SDC1-202ENST00000381150 CETN2P41208 172 aa14.69□□□□□ -0.06
SDC1-202ENST00000381150 PIK3CAP42336 1068 aa14.69□□□□□ -0.06
SDC1-202ENST00000381150 PLCB3Q01970 1234 aa14.69□□□□□ -0.06
SDC1-202ENST00000381150 TRMT10CQ7L0Y3 403 aaKnown RBP14.69□□□□□ -0.06
SDC1-202ENST00000381150 ZNF564Q8TBZ8 553 aaPredicted RBP14.69□□□□□ -0.06
SDC1-202ENST00000381150 GAS8O95995 478 aa14.68□□□□□ -0.06
SDC1-202ENST00000381150 ARP10275 920 aa14.68□□□□□ -0.06
SDC1-202ENST00000381150 WDR4P57081 412 aaKnown RBP14.68□□□□□ -0.06
SDC1-202ENST00000381150 ZRSR2Q15696 482 aaKnown RBP14.68□□□□□ -0.06
SDC1-202ENST00000381150 CEP55Q53EZ4 464 aa14.68□□□□□ -0.06
SDC1-202ENST00000381150 RBBP8NLQ8NC74 664 aaPredicted RBP14.68□□□□□ -0.06
SDC1-202ENST00000381150 KIFAP3Q92845 792 aa14.68□□□□□ -0.06
SDC1-202ENST00000381150 ART4Q93070 314 aa14.68□□□□□ -0.06
SDC1-202ENST00000381150 CCDC127Q96BQ5 260 aa14.68□□□□□ -0.06
SDC1-202ENST00000381150 HAUS1Q96CS2 278 aa14.68□□□□□ -0.06
SDC1-202ENST00000381150 SMC6Q96SB8 1091 aa14.68□□□□□ -0.06
SDC1-202ENST00000381150 ROPN1BQ9BZX4 212 aaPredicted RBP14.68□□□□□ -0.06
SDC1-202ENST00000381150 CCDC134Q9H6E4 229 aa14.68□□□□□ -0.06
SDC1-202ENST00000381150 ROPN1Q9HAT0 212 aaPredicted RBP14.68□□□□□ -0.06
SDC1-202ENST00000381150 NINJ2Q9NZG7 142 aa14.68□□□□□ -0.06
SDC1-202ENST00000381150 PTGER2P43116 358 aa14.68□□□□□ -0.06
SDC1-202ENST00000381150 NPEPPSP55786 919 aa14.68□□□□□ -0.06
SDC1-202ENST00000381150 FAM83AQ86UY5 434 aa14.68□□□□□ -0.06
SDC1-202ENST00000381150 CCDC125Q86Z20 511 aa14.68□□□□□ -0.06
SDC1-202ENST00000381150 RHOT2Q8IXI1 618 aa14.68□□□□□ -0.06
SDC1-202ENST00000381150 DIS3Q9Y2L1 958 aaKnown RBP14.68□□□□□ -0.06
SDC1-202ENST00000381150 ZNF536O15090 1300 aa14.68□□□□□ -0.06
SDC1-202ENST00000381150 CYP26A1O43174 497 aa14.68□□□□□ -0.06
SDC1-202ENST00000381150 OPHN1O60890 802 aa14.68□□□□□ -0.06
SDC1-202ENST00000381150 ZBED4O75132 1171 aa14.68□□□□□ -0.06
SDC1-202ENST00000381150 CDH16O75309 829 aa14.68□□□□□ -0.06
SDC1-202ENST00000381150 RPA3P35244 121 aaPredicted RBP14.68□□□□□ -0.06
SDC1-202ENST00000381150 SPARCL1Q14515 664 aa14.68□□□□□ -0.06
SDC1-202ENST00000381150 PHLDB3Q6NSJ2 640 aa14.68□□□□□ -0.06
SDC1-202ENST00000381150 NLRP9Q7RTR0 991 aa14.68□□□□□ -0.06
SDC1-202ENST00000381150 LARGE2Q8N3Y3 721 aa14.68□□□□□ -0.06
SDC1-202ENST00000381150 CFAP61Q8NHU2 1237 aa14.68□□□□□ -0.06
SDC1-202ENST00000381150 TRABDQ9H4I3 376 aa14.68□□□□□ -0.06
SDC1-202ENST00000381150 APEX2Q9UBZ4 518 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms