RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 ARMC2Q8NEN0 867 aa13.42□□□□□ -0.26
DNMT3A-204ENST00000380756 CCDC68Q9H2F9 335 aa13.42□□□□□ -0.26
DNMT3A-204ENST00000380756 TBX20Q9UMR3 447 aa13.42□□□□□ -0.26
DNMT3A-204ENST00000380756 KIF22Q14807 665 aa13.42□□□□□ -0.26
DNMT3A-204ENST00000380756 C2CD6Q53TS8 623 aa13.42□□□□□ -0.26
DNMT3A-204ENST00000380756 HEATR6Q6AI08 1181 aaKnown RBP13.42□□□□□ -0.26
DNMT3A-204ENST00000380756 EIF1ADQ8N9N8 165 aaKnown RBP13.42□□□□□ -0.26
DNMT3A-204ENST00000380756 RNF149Q8NC42 400 aa13.42□□□□□ -0.26
DNMT3A-204ENST00000380756 ACER1Q8TDN7 264 aa13.42□□□□□ -0.26
DNMT3A-204ENST00000380756 FAM151AQ8WW52 585 aa13.42□□□□□ -0.26
DNMT3A-204ENST00000380756 RANBP17Q9H2T7 1088 aaKnown RBP13.42□□□□□ -0.26
DNMT3A-204ENST00000380756 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.42□□□□□ -0.26
DNMT3A-204ENST00000380756 KLHL8Q9P2G9 620 aaPredicted RBP13.42□□□□□ -0.26
DNMT3A-204ENST00000380756 MX2P20592 715 aa13.41□□□□□ -0.26
DNMT3A-204ENST00000380756 MUTP22033 750 aa13.41□□□□□ -0.26
DNMT3A-204ENST00000380756 AP2B1P63010 937 aa13.41□□□□□ -0.26
DNMT3A-204ENST00000380756 KCNMA1Q12791 1236 aa13.41□□□□□ -0.26
DNMT3A-204ENST00000380756 COG2Q14746 738 aa13.41□□□□□ -0.26
DNMT3A-204ENST00000380756 SLC30A10Q6XR72 485 aa13.41□□□□□ -0.26
DNMT3A-204ENST00000380756 ARMCX2Q7L311 632 aa13.41□□□□□ -0.26
DNMT3A-204ENST00000380756 FEZF2Q8TBJ5 459 aa13.41□□□□□ -0.26
DNMT3A-204ENST00000380756 DTX3LQ8TDB6 740 aa13.41□□□□□ -0.26
DNMT3A-204ENST00000380756 RAB6BQ9NRW1 208 aa13.41□□□□□ -0.26
DNMT3A-204ENST00000380756 CST8O60676 142 aa13.41□□□□□ -0.26
DNMT3A-204ENST00000380756 APRTP07741 180 aa13.41□□□□□ -0.26
DNMT3A-204ENST00000380756 ERFP50548 548 aa13.41□□□□□ -0.26
DNMT3A-204ENST00000380756 NFX1Q12986 1120 aaKnown RBP13.41□□□□□ -0.26
DNMT3A-204ENST00000380756 FSCBQ5H9T9 825 aa13.41□□□□□ -0.26
DNMT3A-204ENST00000380756 LVRNQ6Q4G3 990 aa13.41□□□□□ -0.26
DNMT3A-204ENST00000380756 PIP4K2CQ8TBX8 421 aa13.41□□□□□ -0.26
DNMT3A-204ENST00000380756 CENPKQ9BS16 269 aa13.41□□□□□ -0.26
DNMT3A-204ENST00000380756 WHRNQ9P202 907 aa13.41□□□□□ -0.26
DNMT3A-204ENST00000380756 IGSF9BQ9UPX0 1349 aa13.41□□□□□ -0.26
DNMT3A-204ENST00000380756 RBP3P10745 1247 aa13.41□□□□□ -0.26
DNMT3A-204ENST00000380756 PHKA2P46019 1235 aa13.41□□□□□ -0.26
DNMT3A-204ENST00000380756 KPNA2P52292 529 aaKnown RBP13.41□□□□□ -0.26
DNMT3A-204ENST00000380756 SYCP2LQ5T4T6 812 aa13.41□□□□□ -0.26
DNMT3A-204ENST00000380756 CCDC117Q8IWD4 279 aaPredicted RBP13.41□□□□□ -0.26
DNMT3A-204ENST00000380756 DNAJC19Q96DA6 116 aa13.41□□□□□ -0.26
DNMT3A-204ENST00000380756 KDM4CQ9H3R0 1056 aa13.41□□□□□ -0.26
DNMT3A-204ENST00000380756 WDR35Q9P2L0 1181 aa13.41□□□□□ -0.26
DNMT3A-204ENST00000380756 THEGQ9P2T0 379 aa13.41□□□□□ -0.26
DNMT3A-204ENST00000380756 ABT1Q9ULW3 272 aaKnown RBP13.41□□□□□ -0.26
DNMT3A-204ENST00000380756 FAF1Q9UNN5 650 aaPredicted RBP13.41□□□□□ -0.26
DNMT3A-204ENST00000380756 SHMT1P34896 483 aa13.41□□□□□ -0.26
DNMT3A-204ENST00000380756 CCNA1P78396 465 aa13.41□□□□□ -0.26
DNMT3A-204ENST00000380756 TNFAIP2Q03169 654 aa13.41□□□□□ -0.26
DNMT3A-204ENST00000380756 KDSRQ06136 332 aa13.41□□□□□ -0.26
DNMT3A-204ENST00000380756 ANKRD20A4Q4UJ75 823 aa13.41□□□□□ -0.26
DNMT3A-204ENST00000380756 ANKRD20A8PQ5CZ79 823 aa13.41□□□□□ -0.26
DNMT3A-204ENST00000380756 FAM47CQ5HY64 1035 aa13.41□□□□□ -0.26
DNMT3A-204ENST00000380756 ANKRD20A2Q5SQ80 823 aa13.41□□□□□ -0.26
DNMT3A-204ENST00000380756 ANKRD20A1Q5TYW2 823 aa13.41□□□□□ -0.26
DNMT3A-204ENST00000380756 C11orf63Q6NUN7 778 aa13.41□□□□□ -0.26
DNMT3A-204ENST00000380756 DPP9Q86TI2 863 aa13.41□□□□□ -0.26
DNMT3A-204ENST00000380756 C4orf32Q8N8J7 132 aa13.41□□□□□ -0.26
DNMT3A-204ENST00000380756 GMCL1Q96IK5 515 aa13.41□□□□□ -0.26
DNMT3A-204ENST00000380756 DHX35Q9H5Z1 703 aaKnown RBP13.41□□□□□ -0.26
DNMT3A-204ENST00000380756 SLC5A4Q9NY91 659 aa13.41□□□□□ -0.26
DNMT3A-204ENST00000380756 CHMP2BQ9UQN3 213 aa13.41□□□□□ -0.26
DNMT3A-204ENST00000380756 IL1R1P14778 569 aa13.4□□□□□ -0.26
DNMT3A-204ENST00000380756 RRM1P23921 792 aa13.4□□□□□ -0.26
DNMT3A-204ENST00000380756 CHRNA5P30532 468 aa13.4□□□□□ -0.26
DNMT3A-204ENST00000380756 THOC5Q13769 683 aaKnown RBP13.4□□□□□ -0.26
DNMT3A-204ENST00000380756 MYBPC2Q14324 1141 aa13.4□□□□□ -0.26
DNMT3A-204ENST00000380756 CCDC124Q96CT7 223 aaKnown RBP13.4□□□□□ -0.26
DNMT3A-204ENST00000380756 CYP4F11Q9HBI6 524 aa13.4□□□□□ -0.26
DNMT3A-204ENST00000380756 IPO11Q9UI26 975 aaKnown RBP13.4□□□□□ -0.26
DNMT3A-204ENST00000380756 RASSF10A6NK89 507 aa13.4□□□□□ -0.26
DNMT3A-204ENST00000380756 UBOX5O94941 541 aa13.4□□□□□ -0.26
DNMT3A-204ENST00000380756 NQO1P15559 274 aaKnown RBP13.4□□□□□ -0.26
DNMT3A-204ENST00000380756 PRKCIP41743 596 aa13.4□□□□□ -0.26
DNMT3A-204ENST00000380756 STAT5BP51692 787 aa13.4□□□□□ -0.26
DNMT3A-204ENST00000380756 PRKCEQ02156 737 aa13.4□□□□□ -0.26
DNMT3A-204ENST00000380756 TAF1BQ53T94 588 aaPredicted RBP13.4□□□□□ -0.26
DNMT3A-204ENST00000380756 JADE1Q6IE81 842 aa13.4□□□□□ -0.26
DNMT3A-204ENST00000380756 KRT80Q6KB66 452 aa13.4□□□□□ -0.26
DNMT3A-204ENST00000380756 CATSPER4Q7RTX7 472 aa13.4□□□□□ -0.26
DNMT3A-204ENST00000380756 TAS1R2Q8TE23 839 aa13.4□□□□□ -0.26
DNMT3A-204ENST00000380756 MMTAG2Q9BU76 263 aaKnown RBP13.4□□□□□ -0.26
DNMT3A-204ENST00000380756 TARS2Q9BW92 718 aaKnown RBP13.4□□□□□ -0.26
DNMT3A-204ENST00000380756 MOV10L1Q9BXT6 1211 aaKnown RBP13.4□□□□□ -0.26
DNMT3A-204ENST00000380756 FAM86B1E9PN63 330 aa13.4□□□□□ -0.26
DNMT3A-204ENST00000380756 FAM86B2P0C5J1 330 aa13.4□□□□□ -0.26
DNMT3A-204ENST00000380756 TNFRSF8P28908 595 aa13.4□□□□□ -0.26
DNMT3A-204ENST00000380756 TYK2P29597 1187 aa13.4□□□□□ -0.26
DNMT3A-204ENST00000380756 RPS6P62753 249 aaKnown RBP13.4□□□□□ -0.26
DNMT3A-204ENST00000380756 MTMR2Q13614 643 aa13.4□□□□□ -0.26
DNMT3A-204ENST00000380756 CDKL3Q8IVW4 592 aaPredicted RBP13.4□□□□□ -0.26
DNMT3A-204ENST00000380756 FAM163AQ96GL9 167 aaPredicted RBP13.4□□□□□ -0.26
DNMT3A-204ENST00000380756 DDTLA6NHG4 134 aaPredicted RBP13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 TTC4O95801 387 aa13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 ZNF200P98182 395 aaPredicted RBP13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 KLC1Q07866 573 aa13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 SLC47A2Q86VL8 602 aa13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 MREGQ8N565 214 aa13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 HAS1Q92839 578 aa13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 ZDHHC15Q96MV8 337 aa13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 FAM49AQ9H0Q0 323 aaPredicted RBP13.39□□□□□ -0.27
DNMT3A-204ENST00000380756 RNF181Q9P0P0 153 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms