RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 PPP1R10Q96QC0 940 aaKnown RBP10.05□□□□□ -0.8
HMGN1-202ENST00000380747 PAAF1Q9BRP4 392 aa10.05□□□□□ -0.8
HMGN1-202ENST00000380747 HERC2P3Q9BVR0 1158 aa10.05□□□□□ -0.8
HMGN1-202ENST00000380747 VN1R3Q9BXE9 311 aa10.05□□□□□ -0.8
HMGN1-202ENST00000380747 ZBP1Q9H171 429 aa10.05□□□□□ -0.8
HMGN1-202ENST00000380747 RPF1Q9H9Y2 349 aaKnown RBP10.05□□□□□ -0.8
HMGN1-202ENST00000380747 GOLGA2P5Q9HBQ8 144 aa10.05□□□□□ -0.8
HMGN1-202ENST00000380747 SLC39A2Q9NP94 309 aa10.05□□□□□ -0.8
HMGN1-202ENST00000380747 EXOC1Q9NV70 894 aa10.05□□□□□ -0.8
HMGN1-202ENST00000380747 CNTN3Q9P232 1028 aa10.05□□□□□ -0.8
HMGN1-202ENST00000380747 STK39Q9UEW8 545 aa10.05□□□□□ -0.8
HMGN1-202ENST00000380747 AGO2Q9UKV8 859 aaKnown RBP10.05□□□□□ -0.8
HMGN1-202ENST00000380747 PLXNA4Q9HCM2 1894 aa10.04□□□□□ -0.8
HMGN1-202ENST00000380747 PTPRZ1P23471 2315 aaPredicted RBP10.04□□□□□ -0.8
HMGN1-202ENST00000380747 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.04□□□□□ -0.8
HMGN1-202ENST00000380747 C2orf71A6NGG8 1288 aa10.04□□□□□ -0.8
HMGN1-202ENST00000380747 LACTBL1A8MY62 500 aa10.04□□□□□ -0.8
HMGN1-202ENST00000380747 C2CD2LO14523 706 aa10.04□□□□□ -0.8
HMGN1-202ENST00000380747 EIF3DO15371 548 aaKnown RBP eCLIP10.04□□□□□ -0.8
HMGN1-202ENST00000380747 LINC01565O15544 149 aa10.04□□□□□ -0.8
HMGN1-202ENST00000380747 MEFVO15553 781 aaPredicted RBP10.04□□□□□ -0.8
HMGN1-202ENST00000380747 KLRC4O43908 158 aa10.04□□□□□ -0.8
HMGN1-202ENST00000380747 KIF4AO95239 1232 aa10.04□□□□□ -0.8
HMGN1-202ENST00000380747 URODP06132 367 aa10.04□□□□□ -0.8
HMGN1-202ENST00000380747 CFHP08603 1231 aa10.04□□□□□ -0.8
HMGN1-202ENST00000380747 CTSAP10619 480 aa10.04□□□□□ -0.8
HMGN1-202ENST00000380747 ACOT2P49753 483 aa10.04□□□□□ -0.8
HMGN1-202ENST00000380747 ENOX2Q16206 610 aaKnown RBP10.04□□□□□ -0.8
HMGN1-202ENST00000380747 KMT5BQ4FZB7 885 aa10.04□□□□□ -0.8
HMGN1-202ENST00000380747 KIAA1841Q6NSI8 718 aa10.04□□□□□ -0.8
HMGN1-202ENST00000380747 ARMCX5Q6P1M9 558 aa10.04□□□□□ -0.8
HMGN1-202ENST00000380747 FUT10Q6P4F1 479 aa10.04□□□□□ -0.8
HMGN1-202ENST00000380747 TAS1R1Q7RTX1 841 aa10.04□□□□□ -0.8
HMGN1-202ENST00000380747 RNF135Q8IUD6 432 aa10.04□□□□□ -0.8
HMGN1-202ENST00000380747 MRPL43Q8N983 215 aaKnown RBP10.04□□□□□ -0.8
HMGN1-202ENST00000380747 PRSS33Q8NF86 280 aa10.04□□□□□ -0.8
HMGN1-202ENST00000380747 CCDC47Q96A33 483 aaKnown RBP10.04□□□□□ -0.8
HMGN1-202ENST00000380747 C18orf25Q96B23 403 aaPredicted RBP10.04□□□□□ -0.8
HMGN1-202ENST00000380747 SAAL1Q96ER3 474 aa10.04□□□□□ -0.8
HMGN1-202ENST00000380747 CCDC34Q96HJ3 373 aa10.04□□□□□ -0.8
HMGN1-202ENST00000380747 UROC1Q96N76 676 aa10.04□□□□□ -0.8
HMGN1-202ENST00000380747 FAM213AQ9BRX8 229 aa10.04□□□□□ -0.8
HMGN1-202ENST00000380747 PCIF1Q9H4Z3 704 aa10.04□□□□□ -0.8
HMGN1-202ENST00000380747 PLEKHA5Q9HAU0 1116 aa10.04□□□□□ -0.8
HMGN1-202ENST00000380747 MRPL17Q9NRX2 175 aaKnown RBP10.04□□□□□ -0.8
HMGN1-202ENST00000380747 SLC38A7Q9NVC3 462 aa10.04□□□□□ -0.8
HMGN1-202ENST00000380747 MUTYHQ9UIF7 546 aa10.04□□□□□ -0.8
HMGN1-202ENST00000380747 CPSF3Q9UKF6 684 aaKnown RBP10.04□□□□□ -0.8
HMGN1-202ENST00000380747 ADAM28Q9UKQ2 775 aa10.04□□□□□ -0.8
HMGN1-202ENST00000380747 STYXL1Q9Y6J8 313 aa10.04□□□□□ -0.8
HMGN1-202ENST00000380747 CACNA1AO00555 2505 aa10.04□□□□□ -0.8
HMGN1-202ENST00000380747 SF3B1O75533 1304 aaKnown RBP eCLIP10.04□□□□□ -0.84e-6■□□□□ 8.6
HMGN1-202ENST00000380747 DCHS1Q96JQ0 3298 aa10.03□□□□□ -0.8
HMGN1-202ENST00000380747 TTC26A0AVF1 554 aa10.03□□□□□ -0.8
HMGN1-202ENST00000380747 GOLGA8IPA6NC78 632 aa10.03□□□□□ -0.8
HMGN1-202ENST00000380747 GOLGA8JA6NMD2 632 aa10.03□□□□□ -0.8
HMGN1-202ENST00000380747 FAM189A1O60320 539 aa10.03□□□□□ -0.8
HMGN1-202ENST00000380747 B3GAT3O94766 335 aa10.03□□□□□ -0.8
HMGN1-202ENST00000380747 SOD2P04179 222 aa10.03□□□□□ -0.8
HMGN1-202ENST00000380747 RPN1P04843 607 aaKnown RBP10.03□□□□□ -0.8
HMGN1-202ENST00000380747 MYL1P05976 194 aa10.03□□□□□ -0.8
HMGN1-202ENST00000380747 GARTP22102 1010 aa10.03□□□□□ -0.8
HMGN1-202ENST00000380747 ADSSP30520 456 aa10.03□□□□□ -0.8
HMGN1-202ENST00000380747 GLUD2P49448 558 aa10.03□□□□□ -0.8
HMGN1-202ENST00000380747 NDUFV1P49821 464 aa10.03□□□□□ -0.8
HMGN1-202ENST00000380747 CLCNKBP51801 687 aa10.03□□□□□ -0.8
HMGN1-202ENST00000380747 FOXK2Q01167 660 aa10.03□□□□□ -0.8
HMGN1-202ENST00000380747 FAM160A1Q05DH4 1040 aa10.03□□□□□ -0.8
HMGN1-202ENST00000380747 SOX4Q06945 474 aaPredicted RBP10.03□□□□□ -0.8
HMGN1-202ENST00000380747 CBX2Q14781 532 aaPredicted RBP10.03□□□□□ -0.8
HMGN1-202ENST00000380747 PTPN14Q15678 1187 aa10.03□□□□□ -0.8
HMGN1-202ENST00000380747 DUSP6Q16828 381 aa10.03□□□□□ -0.8
HMGN1-202ENST00000380747 TUSC1Q2TAM9 212 aa10.03□□□□□ -0.8
HMGN1-202ENST00000380747 KANK3Q6NY19 840 aa10.03□□□□□ -0.8
HMGN1-202ENST00000380747 LLGL2Q6P1M3 1020 aa10.03□□□□□ -0.8
HMGN1-202ENST00000380747 DCLRE1AQ6PJP8 1040 aa10.03□□□□□ -0.8
HMGN1-202ENST00000380747 TRIM67Q6ZTA4 783 aa10.03□□□□□ -0.8
HMGN1-202ENST00000380747 EPM2AIP1Q7L775 607 aaPredicted RBP10.03□□□□□ -0.8
HMGN1-202ENST00000380747 CEP57Q86XR8 500 aa10.03□□□□□ -0.8
HMGN1-202ENST00000380747 FMR1NBQ8N0W7 255 aaPredicted RBP10.03□□□□□ -0.8
HMGN1-202ENST00000380747 EFHBQ8N7U6 833 aa10.03□□□□□ -0.8
HMGN1-202ENST00000380747 ZNF507Q8TCN5 953 aa10.03□□□□□ -0.8
HMGN1-202ENST00000380747 SCFD1Q8WVM8 642 aa10.03□□□□□ -0.8
HMGN1-202ENST00000380747 B3GALT6Q96L58 329 aa10.03□□□□□ -0.8
HMGN1-202ENST00000380747 CDCA3Q99618 268 aaPredicted RBP10.03□□□□□ -0.8
HMGN1-202ENST00000380747 CBWD1Q9BRT8 395 aa10.03□□□□□ -0.8
HMGN1-202ENST00000380747 EMILIN2Q9BXX0 1053 aa10.03□□□□□ -0.8
HMGN1-202ENST00000380747 GPR62Q9BZJ7 368 aa10.03□□□□□ -0.8
HMGN1-202ENST00000380747 TUBGCP4Q9UGJ1 667 aa10.03□□□□□ -0.8
HMGN1-202ENST00000380747 UBE4BO95155 1302 aa10.03□□□□□ -0.8
HMGN1-202ENST00000380747 I3L4J1 428 aa10.02□□□□□ -0.81
HMGN1-202ENST00000380747 PODXLO00592 558 aa10.02□□□□□ -0.81
HMGN1-202ENST00000380747 XPOTO43592 962 aaKnown RBP10.02□□□□□ -0.81
HMGN1-202ENST00000380747 EXTL3O43909 919 aa10.02□□□□□ -0.81
HMGN1-202ENST00000380747 CLASP2O75122 1294 aaKnown RBP10.02□□□□□ -0.81
HMGN1-202ENST00000380747 GADD45BO75293 160 aaPredicted RBP10.02□□□□□ -0.81
HMGN1-202ENST00000380747 TBX10O75333 385 aa10.02□□□□□ -0.81
HMGN1-202ENST00000380747 LDHAP00338 332 aaKnown RBP10.02□□□□□ -0.81
HMGN1-202ENST00000380747 SRGAP2BP0DMP2 458 aa10.02□□□□□ -0.81
HMGN1-202ENST00000380747 IGFBP6P24592 240 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms