RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 XPO7Q9UIA9 1087 aaKnown RBP16.86■□□□□ 0.29
COL2A1-202ENST00000380518 CROCC2H7BZ55 1655 aa16.86■□□□□ 0.29
COL2A1-202ENST00000380518 ZBTB7AO95365 584 aa16.86■□□□□ 0.29
COL2A1-202ENST00000380518 ALDH18A1P54886 795 aaKnown RBP16.86■□□□□ 0.29
COL2A1-202ENST00000380518 ABCE1P61221 599 aaKnown RBP16.86■□□□□ 0.29
COL2A1-202ENST00000380518 DACH2Q96NX9 599 aa16.86■□□□□ 0.29
COL2A1-202ENST00000380518 MAP3K20Q9NYL2 800 aaKnown RBP16.86■□□□□ 0.29
COL2A1-202ENST00000380518 PAK5Q9P286 719 aa16.86■□□□□ 0.29
COL2A1-202ENST00000380518 RFX5P48382 616 aaPredicted RBP16.85■□□□□ 0.29
COL2A1-202ENST00000380518 C16orf87Q6PH81 154 aa16.85■□□□□ 0.29
COL2A1-202ENST00000380518 ZNF677Q86XU0 584 aa16.85■□□□□ 0.29
COL2A1-202ENST00000380518 C4orf33Q8N1A6 199 aa16.85■□□□□ 0.29
COL2A1-202ENST00000380518 OR6J1Q8NGC5 347 aa16.85■□□□□ 0.29
COL2A1-202ENST00000380518 MXRA8Q9BRK3 442 aa16.85■□□□□ 0.29
COL2A1-202ENST00000380518 DBR1Q9UK59 544 aaKnown RBP16.85■□□□□ 0.29
COL2A1-202ENST00000380518 DNAJC6O75061 913 aa16.85■□□□□ 0.29
COL2A1-202ENST00000380518 KLRC1P26715 233 aa16.85■□□□□ 0.29
COL2A1-202ENST00000380518 ZNF280CQ8ND82 737 aa16.85■□□□□ 0.29
COL2A1-202ENST00000380518 CLMNQ96JQ2 1002 aa16.85■□□□□ 0.29
COL2A1-202ENST00000380518 PPP1R3GB7ZBB8 358 aa16.85■□□□□ 0.29
COL2A1-202ENST00000380518 ANGPT2O15123 496 aa16.85■□□□□ 0.29
COL2A1-202ENST00000380518 DYNC1I2Q13409 638 aaKnown RBP16.85■□□□□ 0.29
COL2A1-202ENST00000380518 SPATA2LQ8IUW3 424 aaPredicted RBP16.85■□□□□ 0.29
COL2A1-202ENST00000380518 FAM151AQ8WW52 585 aa16.85■□□□□ 0.29
COL2A1-202ENST00000380518 DDX50Q9BQ39 737 aaKnown RBP16.85■□□□□ 0.29
COL2A1-202ENST00000380518 ISCUQ9H1K1 167 aa16.85■□□□□ 0.29
COL2A1-202ENST00000380518 RSAD1Q9HA92 442 aa16.85■□□□□ 0.29
COL2A1-202ENST00000380518 TAF6LQ9Y6J9 622 aa16.85■□□□□ 0.29
COL2A1-202ENST00000380518 PHF20L1A8MW92 1017 aa16.85■□□□□ 0.29
COL2A1-202ENST00000380518 IL18RAPO95256 599 aa16.85■□□□□ 0.29
COL2A1-202ENST00000380518 ENO1P06733 434 aaKnown RBP16.85■□□□□ 0.29
COL2A1-202ENST00000380518 HDAC4P56524 1084 aa16.85■□□□□ 0.29
COL2A1-202ENST00000380518 PRKCEQ02156 737 aa16.85■□□□□ 0.29
COL2A1-202ENST00000380518 RBBP7Q16576 425 aa16.85■□□□□ 0.29
COL2A1-202ENST00000380518 DCAF4L1Q3SXM0 396 aa16.85■□□□□ 0.29
COL2A1-202ENST00000380518 RFX8Q6ZV50 586 aa16.85■□□□□ 0.29
COL2A1-202ENST00000380518 ANKRD7Q92527 254 aa16.85■□□□□ 0.29
COL2A1-202ENST00000380518 TSPAN17Q96FV3 270 aa16.85■□□□□ 0.29
COL2A1-202ENST00000380518 GJD4Q96KN9 370 aaPredicted RBP16.85■□□□□ 0.29
COL2A1-202ENST00000380518 RUBCNLQ9H714 662 aa16.85■□□□□ 0.29
COL2A1-202ENST00000380518 GPBP1L1Q9HC44 474 aaPredicted RBP16.85■□□□□ 0.29
COL2A1-202ENST00000380518 AFF4Q9UHB7 1163 aaKnown RBP16.85■□□□□ 0.29
COL2A1-202ENST00000380518 ARHGAP26Q9UNA1 814 aa16.85■□□□□ 0.29
COL2A1-202ENST00000380518 CARSP49589 748 aaKnown RBP16.84■□□□□ 0.29
COL2A1-202ENST00000380518 ADAM33Q9BZ11 813 aa16.84■□□□□ 0.29
COL2A1-202ENST00000380518 UNC45AQ9H3U1 944 aa16.84■□□□□ 0.29
COL2A1-202ENST00000380518 PTPRUQ92729 1446 aa16.84■□□□□ 0.29
COL2A1-202ENST00000380518 HOXD10P28358 340 aa16.84■□□□□ 0.29
COL2A1-202ENST00000380518 MOV10L1Q9BXT6 1211 aaKnown RBP16.84■□□□□ 0.29
COL2A1-202ENST00000380518 NPHS2Q9NP85 383 aa16.84■□□□□ 0.29
COL2A1-202ENST00000380518 SMARCAL1Q9NZC9 954 aa16.84■□□□□ 0.29
COL2A1-202ENST00000380518 GGT7Q9UJ14 662 aa16.84■□□□□ 0.29
COL2A1-202ENST00000380518 HPS5Q9UPZ3 1129 aa16.84■□□□□ 0.29
COL2A1-202ENST00000380518 IGSF9BQ9UPX0 1349 aa16.84■□□□□ 0.29
COL2A1-202ENST00000380518 RARBP10826 455 aa16.84■□□□□ 0.29
COL2A1-202ENST00000380518 LSP1P33241 339 aa16.84■□□□□ 0.29
COL2A1-202ENST00000380518 ANO4Q32M45 955 aa16.84■□□□□ 0.29
COL2A1-202ENST00000380518 XRRA1Q6P2D8 792 aa16.84■□□□□ 0.29
COL2A1-202ENST00000380518 NOA1Q8NC60 698 aaKnown RBP16.84■□□□□ 0.29
COL2A1-202ENST00000380518 RIN2Q8WYP3 895 aaPredicted RBP16.84■□□□□ 0.29
COL2A1-202ENST00000380518 PBXIP1Q96AQ6 731 aa16.84■□□□□ 0.29
COL2A1-202ENST00000380518 NT5C1AQ9BXI3 368 aa16.84■□□□□ 0.29
COL2A1-202ENST00000380518 SETD1BQ9UPS6 1966 aaKnown RBP16.84■□□□□ 0.29
COL2A1-202ENST00000380518 NTSR2O95665 410 aa16.84■□□□□ 0.29
COL2A1-202ENST00000380518 MAGEA4P43358 317 aa16.84■□□□□ 0.29
COL2A1-202ENST00000380518 CENPCQ03188 943 aa16.84■□□□□ 0.29
COL2A1-202ENST00000380518 KYNUQ16719 465 aa16.84■□□□□ 0.29
COL2A1-202ENST00000380518 PLA2G4FQ68DD2 849 aa16.84■□□□□ 0.29
COL2A1-202ENST00000380518 OR2W6PQ8NHA6 318 aa16.84■□□□□ 0.29
COL2A1-202ENST00000380518 ANKEF1Q9NU02 776 aa16.84■□□□□ 0.29
COL2A1-202ENST00000380518 CHRNA5P30532 468 aa16.83■□□□□ 0.29
COL2A1-202ENST00000380518 GRIK1P39086 918 aa16.83■□□□□ 0.29
COL2A1-202ENST00000380518 CAPRIN2Q6IMN6 1127 aaKnown RBP16.83■□□□□ 0.29
COL2A1-202ENST00000380518 RIBC1Q8N443 379 aaPredicted RBP16.83■□□□□ 0.29
COL2A1-202ENST00000380518 SH3KBP1Q96B97 665 aa16.83■□□□□ 0.29
COL2A1-202ENST00000380518 KDM4CQ9H3R0 1056 aa16.83■□□□□ 0.29
COL2A1-202ENST00000380518 ZNF70Q9UC06 446 aaPredicted RBP16.83■□□□□ 0.29
COL2A1-202ENST00000380518 TSPOAP1O95153 1857 aa16.83■□□□□ 0.28
COL2A1-202ENST00000380518 CACNB2Q08289 660 aaPredicted RBP16.83■□□□□ 0.28
COL2A1-202ENST00000380518 INPP5AQ14642 412 aa16.83■□□□□ 0.28
COL2A1-202ENST00000380518 THEMIS2Q5TEJ8 643 aa16.83■□□□□ 0.28
COL2A1-202ENST00000380518 MICALL2Q8IY33 904 aa16.83■□□□□ 0.28
COL2A1-202ENST00000380518 SPATA18Q8TC71 538 aa16.83■□□□□ 0.28
COL2A1-202ENST00000380518 ZIM3Q96PE6 472 aa16.83■□□□□ 0.28
COL2A1-202ENST00000380518 NIF3L1Q9GZT8 377 aa16.83■□□□□ 0.28
COL2A1-202ENST00000380518 CARD9Q9H257 536 aa16.83■□□□□ 0.28
COL2A1-202ENST00000380518 MRGBPQ9NV56 204 aa16.83■□□□□ 0.28
COL2A1-202ENST00000380518 MAD2L2Q9UI95 211 aa16.83■□□□□ 0.28
COL2A1-202ENST00000380518 PLAGL2Q9UPG8 496 aa16.83■□□□□ 0.28
COL2A1-202ENST00000380518 TRAF3IP3Q9Y228 551 aa16.83■□□□□ 0.28
COL2A1-202ENST00000380518 CDC42BPBQ9Y5S2 1711 aa16.83■□□□□ 0.28
COL2A1-202ENST00000380518 CD4P01730 458 aa16.83■□□□□ 0.28
COL2A1-202ENST00000380518 RBP3P10745 1247 aa16.83■□□□□ 0.28
COL2A1-202ENST00000380518 TROAPQ12815 778 aa16.83■□□□□ 0.28
COL2A1-202ENST00000380518 USP10Q14694 798 aaKnown RBP16.83■□□□□ 0.28
COL2A1-202ENST00000380518 SYCP2LQ5T4T6 812 aa16.83■□□□□ 0.28
COL2A1-202ENST00000380518 KCNK16Q96T55 309 aa16.83■□□□□ 0.28
COL2A1-202ENST00000380518 COG4Q9H9E3 785 aa16.83■□□□□ 0.28
COL2A1-202ENST00000380518 CHMP2BQ9UQN3 213 aa16.83■□□□□ 0.28
COL2A1-202ENST00000380518 RASSF10A6NK89 507 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms