RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 USTQ9Y2C2 406 aa8.51□□□□□ -1.05
PDLIM5-204ENST00000380176 SH3BP1Q9Y3L3 701 aa8.51□□□□□ -1.05
PDLIM5-204ENST00000380176 GOLGA6L10A0A0M3HER8 536 aa8.51□□□□□ -1.05
PDLIM5-204ENST00000380176 KIAA0391O15091 583 aaKnown RBP8.51□□□□□ -1.05
PDLIM5-204ENST00000380176 FAM189A1O60320 539 aa8.51□□□□□ -1.05
PDLIM5-204ENST00000380176 MSCO60682 206 aa8.51□□□□□ -1.05
PDLIM5-204ENST00000380176 PHF2O75151 1096 aa8.51□□□□□ -1.05
PDLIM5-204ENST00000380176 RARAP10276 462 aa8.51□□□□□ -1.05
PDLIM5-204ENST00000380176 KCNJ1P48048 391 aa8.51□□□□□ -1.05
PDLIM5-204ENST00000380176 DHX9Q08211 1270 aaKnown RBP8.51□□□□□ -1.05
PDLIM5-204ENST00000380176 ZNF844Q08AG5 666 aa8.51□□□□□ -1.05
PDLIM5-204ENST00000380176 SLFN12LQ6IEE8 588 aa8.51□□□□□ -1.05
PDLIM5-204ENST00000380176 MAGOHBQ96A72 148 aaKnown RBP8.51□□□□□ -1.05
PDLIM5-204ENST00000380176 CGRRF1Q99675 332 aa8.51□□□□□ -1.05
PDLIM5-204ENST00000380176 HERPUD2Q9BSE4 406 aa8.51□□□□□ -1.05
PDLIM5-204ENST00000380176 TMEM134Q9H6X4 195 aa8.51□□□□□ -1.05
PDLIM5-204ENST00000380176 FAM114A2Q9NRY5 505 aa8.51□□□□□ -1.05
PDLIM5-204ENST00000380176 PCDHB4Q9Y5E5 795 aa8.51□□□□□ -1.05
PDLIM5-204ENST00000380176 ANK1P16157 1881 aa8.51□□□□□ -1.05
PDLIM5-204ENST00000380176 O00370 1275 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 CLDN3O15551 220 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 CYP1A1P04798 512 aaPredicted RBP8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 TGFB3P10600 412 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 MAPK4P31152 587 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 ABCD1P33897 745 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 GNGT1P63211 74 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 NOP14P78316 857 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 MOGSQ13724 837 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 UBAP2Q5T6F2 1119 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 SEL1L2Q5TEA6 688 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 FAM160B1Q5W0V3 765 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 CCDC137Q6PK04 289 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 ZDHHC24Q6UX98 284 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 SLC13A5Q86YT5 568 aaPredicted RBP8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 FBXO16Q8IX29 292 aaPredicted RBP8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 LRRC45Q96CN5 670 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 ATP6V1G3Q96LB4 118 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 GPR20Q99678 358 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 CENPHQ9H3R5 247 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 TMBIM4Q9HC24 238 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 RNF181Q9P0P0 153 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 LCMT1Q9UIC8 334 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 ATP8A1Q9Y2Q0 1164 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 MYO1FO00160 1098 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 GJB6O95452 261 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 LDHAP00338 332 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 CLTAP09496 248 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 RPL21P46778 160 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 IREB2P48200 963 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 PLTPP55058 493 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 RWDD2BP57060 319 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 LAMTOR4Q0VGL1 99 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 PDCLQ13371 301 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 DHX34Q14147 1143 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 MON1BQ7L1V2 547 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 CDR2LQ86X02 465 aaPredicted RBP8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 ERO1BQ86YB8 467 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 TMEM130Q8N3G9 435 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 RNF149Q8NC42 400 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 FBXO25Q8TCJ0 367 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 MORC4Q8TE76 937 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 GIPC2Q8TF65 315 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 FMO2Q99518 471 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 C11orf70Q9BRQ4 267 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 TXLNGYQ9BZA5 131 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 CCDC113Q9H0I3 377 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 RAB17Q9H0T7 212 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 PDGFCQ9NRA1 345 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 GRHL1Q9NZI5 618 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 PTPN22Q9Y2R2 807 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 CENPFP49454 3210 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 GNA15P30679 374 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 CHRNA3P32297 505 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 NF2P35240 595 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 SKOR1P84550 965 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 CENPCQ03188 943 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 NCOA4Q13772 614 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 TCHPQ9BT92 498 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 MTMR12Q9C0I1 747 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 EPB41L4BQ9H329 900 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 AZI2Q9H6S1 392 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 PCYOX1Q9UHG3 505 aa8.5□□□□□ -1.05
PDLIM5-204ENST00000380176 FAM187AA6NFU0 413 aa8.49□□□□□ -1.05
PDLIM5-204ENST00000380176 ABLIM1O14639 778 aa8.49□□□□□ -1.05
PDLIM5-204ENST00000380176 NOMO3P69849 1222 aa8.49□□□□□ -1.05
PDLIM5-204ENST00000380176 GUCY1A3Q02108 690 aa8.49□□□□□ -1.05
PDLIM5-204ENST00000380176 PLCB4Q15147 1175 aa8.49□□□□□ -1.05
PDLIM5-204ENST00000380176 PPP1R15BQ5SWA1 713 aa8.49□□□□□ -1.05
PDLIM5-204ENST00000380176 CELF3Q5SZQ8 465 aaKnown RBP8.49□□□□□ -1.05
PDLIM5-204ENST00000380176 WDR78Q5VTH9 848 aa8.49□□□□□ -1.05
PDLIM5-204ENST00000380176 LRIG3Q6UXM1 1119 aa8.49□□□□□ -1.05
PDLIM5-204ENST00000380176 ZNF677Q86XU0 584 aa8.49□□□□□ -1.05
PDLIM5-204ENST00000380176 ANKRD13AQ8IZ07 590 aa8.49□□□□□ -1.05
PDLIM5-204ENST00000380176 RBBP8NLQ8NC74 664 aaPredicted RBP8.49□□□□□ -1.05
PDLIM5-204ENST00000380176 C1orf54Q8WWF1 131 aa8.49□□□□□ -1.05
PDLIM5-204ENST00000380176 SREK1Q8WXA9 508 aaKnown RBP8.49□□□□□ -1.05
PDLIM5-204ENST00000380176 CDCA5Q96FF9 252 aa8.49□□□□□ -1.05
PDLIM5-204ENST00000380176 ACO2Q99798 780 aaKnown RBP8.49□□□□□ -1.05
PDLIM5-204ENST00000380176 FHDC1Q9C0D6 1143 aaPredicted RBP8.49□□□□□ -1.05
PDLIM5-204ENST00000380176 VRTNQ9H8Y1 702 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms