RNA–Protein interactions for RNA: ENST00000378839.1

CCDC3-202, Transcript of coiled-coil domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC3, Length 3,180 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC3-202ENST00000378839 SPATC1LQ9H0A9 340 aa14.27□□□□□ -0.12
CCDC3-202ENST00000378839 CCDC113Q9H0I3 377 aa14.27□□□□□ -0.12
CCDC3-202ENST00000378839 NDUFAB1O14561 156 aa14.27□□□□□ -0.13
CCDC3-202ENST00000378839 DDNO94850 711 aaPredicted RBP14.27□□□□□ -0.13
CCDC3-202ENST00000378839 NUDT17P0C025 328 aa14.27□□□□□ -0.13
CCDC3-202ENST00000378839 HSPA6P17066 643 aa14.27□□□□□ -0.13
CCDC3-202ENST00000378839 STAT5BP51692 787 aa14.27□□□□□ -0.13
CCDC3-202ENST00000378839 NOP14P78316 857 aaKnown RBP14.27□□□□□ -0.13
CCDC3-202ENST00000378839 IFI35P80217 286 aaPredicted RBP14.27□□□□□ -0.13
CCDC3-202ENST00000378839 QPCTQ16769 361 aa14.27□□□□□ -0.13
CCDC3-202ENST00000378839 Q3C1V9 767 aa14.27□□□□□ -0.13
CCDC3-202ENST00000378839 AGBL2Q5U5Z8 902 aa14.27□□□□□ -0.13
CCDC3-202ENST00000378839 MMS22LQ6ZRQ5 1243 aa14.27□□□□□ -0.13
CCDC3-202ENST00000378839 ABRAQ8N0Z2 381 aa14.27□□□□□ -0.13
CCDC3-202ENST00000378839 LRRC71Q8N4P6 559 aa14.27□□□□□ -0.13
CCDC3-202ENST00000378839 MYCBPAPQ8TBZ2 947 aa14.27□□□□□ -0.13
CCDC3-202ENST00000378839 CCT8L2Q96SF2 557 aa14.27□□□□□ -0.13
CCDC3-202ENST00000378839 HEMGNQ9BXL5 484 aa14.27□□□□□ -0.13
CCDC3-202ENST00000378839 ADAM7Q9H2U9 754 aa14.27□□□□□ -0.13
CCDC3-202ENST00000378839 PPANQ9NQ55 473 aaKnown RBP14.27□□□□□ -0.13
CCDC3-202ENST00000378839 CNTN6Q9UQ52 1028 aa14.27□□□□□ -0.13
CCDC3-202ENST00000378839 FAM169AQ9Y6X4 670 aa14.27□□□□□ -0.13
CCDC3-202ENST00000378839 GOLGA6L10A6NI86 522 aa14.26□□□□□ -0.13
CCDC3-202ENST00000378839 GNA15P30679 374 aa14.26□□□□□ -0.13
CCDC3-202ENST00000378839 CHKAP35790 457 aa14.26□□□□□ -0.13
CCDC3-202ENST00000378839 TRIP13Q15645 432 aaPredicted RBP14.26□□□□□ -0.13
CCDC3-202ENST00000378839 ATP13A4Q4VNC1 1196 aa14.26□□□□□ -0.13
CCDC3-202ENST00000378839 NLRP14Q86W24 1093 aa14.26□□□□□ -0.13
CCDC3-202ENST00000378839 GPC2Q8N158 579 aa14.26□□□□□ -0.13
CCDC3-202ENST00000378839 RBBP8NLQ8NC74 664 aaPredicted RBP14.26□□□□□ -0.13
CCDC3-202ENST00000378839 ZNF473Q8WTR7 871 aaKnown RBP14.26□□□□□ -0.13
CCDC3-202ENST00000378839 TRAPPC12Q8WVT3 735 aa14.26□□□□□ -0.13
CCDC3-202ENST00000378839 DDX23Q9BUQ8 820 aaKnown RBP14.26□□□□□ -0.13
CCDC3-202ENST00000378839 H0YCG3 227 aa14.26□□□□□ -0.13
CCDC3-202ENST00000378839 MAFO75444 373 aaPredicted RBP14.26□□□□□ -0.13
CCDC3-202ENST00000378839 RPL7AP62424 266 aaKnown RBP14.26□□□□□ -0.13
CCDC3-202ENST00000378839 EFCAB13Q8IY85 973 aa14.26□□□□□ -0.13
CCDC3-202ENST00000378839 PAGR1Q9BTK6 254 aa14.26□□□□□ -0.13
CCDC3-202ENST00000378839 PODXLO00592 558 aa14.26□□□□□ -0.13
CCDC3-202ENST00000378839 ZNF132P52740 706 aa14.26□□□□□ -0.13
CCDC3-202ENST00000378839 PPP2R2AP63151 447 aa14.26□□□□□ -0.13
CCDC3-202ENST00000378839 ZNF252P-AS1Q0IIN9 211 aa14.26□□□□□ -0.13
CCDC3-202ENST00000378839 KLF1Q13351 362 aaPredicted RBP14.26□□□□□ -0.13
CCDC3-202ENST00000378839 NCOA4Q13772 614 aa14.26□□□□□ -0.13
CCDC3-202ENST00000378839 CLUL1Q15846 466 aa14.26□□□□□ -0.13
CCDC3-202ENST00000378839 GADL1Q6ZQY3 521 aa14.26□□□□□ -0.13
CCDC3-202ENST00000378839 CDR2LQ86X02 465 aaPredicted RBP14.26□□□□□ -0.13
CCDC3-202ENST00000378839 EPS8L3Q8TE67 593 aaKnown RBP14.26□□□□□ -0.13
CCDC3-202ENST00000378839 COPS5Q92905 334 aa14.26□□□□□ -0.13
CCDC3-202ENST00000378839 MTMR12Q9C0I1 747 aa14.26□□□□□ -0.13
CCDC3-202ENST00000378839 TMEM134Q9H6X4 195 aa14.26□□□□□ -0.13
CCDC3-202ENST00000378839 ELP3Q9H9T3 547 aa14.26□□□□□ -0.13
CCDC3-202ENST00000378839 KLHL11Q9NVR0 708 aa14.26□□□□□ -0.13
CCDC3-202ENST00000378839 NEU2Q9Y3R4 380 aa14.26□□□□□ -0.13
CCDC3-202ENST00000378839 SMIM23A6NLE4 172 aa14.25□□□□□ -0.13
CCDC3-202ENST00000378839 PROSCO94903 275 aa14.25□□□□□ -0.13
CCDC3-202ENST00000378839 SRGAP2CP0DJJ0 459 aa14.25□□□□□ -0.13
CCDC3-202ENST00000378839 NSFP46459 744 aaKnown RBP14.25□□□□□ -0.13
CCDC3-202ENST00000378839 KRT17Q04695 432 aa14.25□□□□□ -0.13
CCDC3-202ENST00000378839 RUFY4Q6ZNE9 571 aa14.25□□□□□ -0.13
CCDC3-202ENST00000378839 ZNF677Q86XU0 584 aa14.25□□□□□ -0.13
CCDC3-202ENST00000378839 DHX37Q8IY37 1157 aaKnown RBP14.25□□□□□ -0.13
CCDC3-202ENST00000378839 FAM107BQ9H098 131 aa14.25□□□□□ -0.13
CCDC3-202ENST00000378839 RASAL2Q9UJF2 1139 aa14.25□□□□□ -0.13
CCDC3-202ENST00000378839 PPP2R3BQ9Y5P8 575 aa14.25□□□□□ -0.13
CCDC3-202ENST00000378839 MGAMO43451 1857 aa14.25□□□□□ -0.13
CCDC3-202ENST00000378839 FOXO6A8MYZ6 492 aa14.25□□□□□ -0.13
CCDC3-202ENST00000378839 RALAP11233 206 aa14.25□□□□□ -0.13
CCDC3-202ENST00000378839 FNTAP49354 379 aa14.25□□□□□ -0.13
CCDC3-202ENST00000378839 MYL6P60660 151 aa14.25□□□□□ -0.13
CCDC3-202ENST00000378839 SGO2Q562F6 1265 aa14.25□□□□□ -0.13
CCDC3-202ENST00000378839 SPDYCQ5MJ68 293 aa14.25□□□□□ -0.13
CCDC3-202ENST00000378839 SLFN12LQ6IEE8 588 aa14.25□□□□□ -0.13
CCDC3-202ENST00000378839 RHBDF2Q6PJF5 856 aa14.25□□□□□ -0.13
CCDC3-202ENST00000378839 RAPGEF5Q92565 580 aa14.25□□□□□ -0.13
CCDC3-202ENST00000378839 EBAG9O00559 213 aa14.24□□□□□ -0.13
CCDC3-202ENST00000378839 MEFVO15553 781 aaPredicted RBP14.24□□□□□ -0.13
CCDC3-202ENST00000378839 RIPK2O43353 540 aa14.24□□□□□ -0.13
CCDC3-202ENST00000378839 LAMTOR4Q0VGL1 99 aa14.24□□□□□ -0.13
CCDC3-202ENST00000378839 PLEKHA7Q6IQ23 1121 aa14.24□□□□□ -0.13
CCDC3-202ENST00000378839 WDTC1Q8N5D0 677 aa14.24□□□□□ -0.13
CCDC3-202ENST00000378839 OTUD5Q96G74 571 aa14.24□□□□□ -0.13
CCDC3-202ENST00000378839 GPR20Q99678 358 aa14.24□□□□□ -0.13
CCDC3-202ENST00000378839 DCLK3Q9C098 648 aa14.24□□□□□ -0.13
CCDC3-202ENST00000378839 AZI2Q9H6S1 392 aa14.24□□□□□ -0.13
CCDC3-202ENST00000378839 ADAM22Q9P0K1 906 aa14.24□□□□□ -0.13
CCDC3-202ENST00000378839 MTUS1Q9ULD2 1270 aa14.24□□□□□ -0.13
CCDC3-202ENST00000378839 E7EVH7 732 aa14.24□□□□□ -0.13
CCDC3-202ENST00000378839 B4GALT5O43286 388 aa14.24□□□□□ -0.13
CCDC3-202ENST00000378839 THAP12O43422 761 aa14.24□□□□□ -0.13
CCDC3-202ENST00000378839 RFC5P40937 340 aa14.24□□□□□ -0.13
CCDC3-202ENST00000378839 SLCO1A2P46721 670 aa14.24□□□□□ -0.13
CCDC3-202ENST00000378839 OGDHQ02218 1023 aa14.24□□□□□ -0.13
CCDC3-202ENST00000378839 IFFO1Q0D2I5 559 aa14.24□□□□□ -0.13
CCDC3-202ENST00000378839 ZNF394Q53GI3 561 aa14.24□□□□□ -0.13
CCDC3-202ENST00000378839 TXNRD3NBQ6F5E7 133 aa14.24□□□□□ -0.13
CCDC3-202ENST00000378839 TMEM192Q8IY95 271 aa14.24□□□□□ -0.13
CCDC3-202ENST00000378839 CEP120Q8N960 986 aa14.24□□□□□ -0.13
CCDC3-202ENST00000378839 ZNF606Q8WXB4 792 aa14.24□□□□□ -0.13
CCDC3-202ENST00000378839 SLCO2A1Q92959 643 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms