RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 PAPOLBQ9NRJ5 636 aaKnown RBP17.13■□□□□ 0.33
RGP1-201ENST00000378078 PODXLO00592 558 aa17.13■□□□□ 0.33
RGP1-201ENST00000378078 P4HBP07237 508 aaKnown RBP17.13■□□□□ 0.33
RGP1-201ENST00000378078 NCAM1P13591 858 aa17.13■□□□□ 0.33
RGP1-201ENST00000378078 ABHD10Q9NUJ1 306 aa17.13■□□□□ 0.33
RGP1-201ENST00000378078 AIM2O14862 343 aa17.13■□□□□ 0.33
RGP1-201ENST00000378078 FGFR1P11362 822 aa17.13■□□□□ 0.33
RGP1-201ENST00000378078 HARS2P49590 506 aaKnown RBP17.13■□□□□ 0.33
RGP1-201ENST00000378078 CDH18Q13634 790 aa17.13■□□□□ 0.33
RGP1-201ENST00000378078 CPB2Q96IY4 423 aa17.13■□□□□ 0.33
RGP1-201ENST00000378078 IGFBP4P22692 258 aa17.12■□□□□ 0.33
RGP1-201ENST00000378078 TRIP4Q15650 581 aaPredicted RBP17.12■□□□□ 0.33
RGP1-201ENST00000378078 P3H1Q32P28 736 aa17.12■□□□□ 0.33
RGP1-201ENST00000378078 SARM1Q6SZW1 724 aa17.12■□□□□ 0.33
RGP1-201ENST00000378078 TBC1D22BQ9NU19 505 aa17.12■□□□□ 0.33
RGP1-201ENST00000378078 ZFATQ9P243 1243 aa17.12■□□□□ 0.33
RGP1-201ENST00000378078 ATP1A1P05023 1023 aaKnown RBP17.12■□□□□ 0.33
RGP1-201ENST00000378078 CLCN6P51797 869 aa17.12■□□□□ 0.33
RGP1-201ENST00000378078 QRICH1Q2TAL8 776 aa17.12■□□□□ 0.33
RGP1-201ENST00000378078 ARHGAP15Q53QZ3 475 aa17.12■□□□□ 0.33
RGP1-201ENST00000378078 VSTM4Q8IW00 320 aa17.12■□□□□ 0.33
RGP1-201ENST00000378078 GOLPH3LQ9H4A5 285 aa17.12■□□□□ 0.33
RGP1-201ENST00000378078 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.12■□□□□ 0.336e-7■■■□□ 17
RGP1-201ENST00000378078 APPL1Q9UKG1 709 aa17.12■□□□□ 0.33
RGP1-201ENST00000378078 TBC1D4O60343 1298 aa17.12■□□□□ 0.33
RGP1-201ENST00000378078 CYP2E1P05181 493 aaPredicted RBP17.12■□□□□ 0.33
RGP1-201ENST00000378078 ERVK-10P10266 1014 aa17.12■□□□□ 0.33
RGP1-201ENST00000378078 KRT39Q6A163 491 aa17.12■□□□□ 0.33
RGP1-201ENST00000378078 IPCEF1Q8WWN9 437 aaPredicted RBP17.12■□□□□ 0.33
RGP1-201ENST00000378078 OSBPL1AQ9BXW6 950 aa17.12■□□□□ 0.33
RGP1-201ENST00000378078 HACL1Q9UJ83 578 aa17.12■□□□□ 0.33
RGP1-201ENST00000378078 FBXL21Q9UKT6 434 aa17.12■□□□□ 0.33
RGP1-201ENST00000378078 TARSL2A2RTX5 802 aaKnown RBP17.12■□□□□ 0.33
RGP1-201ENST00000378078 A8MX80 341 aa17.12■□□□□ 0.33
RGP1-201ENST00000378078 BRAFP15056 766 aa17.12■□□□□ 0.33
RGP1-201ENST00000378078 LONRF1Q17RB8 773 aa17.12■□□□□ 0.33
RGP1-201ENST00000378078 EFCAB12Q6NXP0 572 aa17.12■□□□□ 0.33
RGP1-201ENST00000378078 PTPRHQ9HD43 1115 aa17.12■□□□□ 0.33
RGP1-201ENST00000378078 PGK2P07205 417 aa17.12■□□□□ 0.33
RGP1-201ENST00000378078 OTOAQ7RTW8 1153 aa17.12■□□□□ 0.33
RGP1-201ENST00000378078 UNKQ9C0B0 810 aaKnown RBP17.12■□□□□ 0.33
RGP1-201ENST00000378078 TMEM117Q9H0C3 514 aa17.12■□□□□ 0.33
RGP1-201ENST00000378078 FEN1P39748 380 aaKnown RBP17.11■□□□□ 0.33
RGP1-201ENST00000378078 HDAC4P56524 1084 aa17.11■□□□□ 0.33
RGP1-201ENST00000378078 GJC2Q5T442 439 aaPredicted RBP17.11■□□□□ 0.33
RGP1-201ENST00000378078 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.11■□□□□ 0.33
RGP1-201ENST00000378078 DHX40Q8IX18 779 aaKnown RBP17.11■□□□□ 0.33
RGP1-201ENST00000378078 PHACTR4Q8IZ21 702 aa17.11■□□□□ 0.33
RGP1-201ENST00000378078 YME1L1Q96TA2 773 aa17.11■□□□□ 0.33
RGP1-201ENST00000378078 PHLPP2Q6ZVD8 1323 aa17.11■□□□□ 0.33
RGP1-201ENST00000378078 TRAPPC3O43617 180 aa17.11■□□□□ 0.33
RGP1-201ENST00000378078 GGPS1O95749 300 aa17.11■□□□□ 0.33
RGP1-201ENST00000378078 NFICP08651 508 aa17.11■□□□□ 0.33
RGP1-201ENST00000378078 BNIPLQ7Z465 357 aa17.11■□□□□ 0.33
RGP1-201ENST00000378078 LDHDQ86WU2 507 aa17.11■□□□□ 0.33
RGP1-201ENST00000378078 TTC13Q8NBP0 860 aa17.11■□□□□ 0.33
RGP1-201ENST00000378078 UXS1Q8NBZ7 420 aa17.11■□□□□ 0.33
RGP1-201ENST00000378078 ZNF560Q96MR9 790 aa17.11■□□□□ 0.33
RGP1-201ENST00000378078 GIMAP4Q9NUV9 329 aa17.11■□□□□ 0.33
RGP1-201ENST00000378078 BFARQ9NZS9 450 aa17.11■□□□□ 0.33
RGP1-201ENST00000378078 FBXO2Q9UK22 296 aaPredicted RBP17.11■□□□□ 0.33
RGP1-201ENST00000378078 ATP6V1C1P21283 382 aa17.11■□□□□ 0.33
RGP1-201ENST00000378078 ALDH7A1P49419 539 aaKnown RBP17.11■□□□□ 0.33
RGP1-201ENST00000378078 RAD23BP54727 409 aa17.11■□□□□ 0.33
RGP1-201ENST00000378078 DEUP1Q05D60 604 aa17.11■□□□□ 0.33
RGP1-201ENST00000378078 SNX8Q9Y5X2 465 aa17.11■□□□□ 0.33
RGP1-201ENST00000378078 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.11■□□□□ 0.33
RGP1-201ENST00000378078 ITGB6P18564 788 aa17.11■□□□□ 0.33
RGP1-201ENST00000378078 RESP18Q5W5W9 173 aa17.11■□□□□ 0.33
RGP1-201ENST00000378078 EXOC4Q96A65 974 aa17.11■□□□□ 0.33
RGP1-201ENST00000378078 CPDO75976 1380 aa17.11■□□□□ 0.33
RGP1-201ENST00000378078 PTPN7P35236 360 aa17.11■□□□□ 0.33
RGP1-201ENST00000378078 EPC2Q52LR7 807 aa17.11■□□□□ 0.33
RGP1-201ENST00000378078 CINPQ9BW66 212 aaPredicted RBP17.11■□□□□ 0.33
RGP1-201ENST00000378078 METTL5Q9NRN9 209 aaKnown RBP17.11■□□□□ 0.33
RGP1-201ENST00000378078 TRIM10Q9UDY6 481 aa17.11■□□□□ 0.33
RGP1-201ENST00000378078 NDOR1Q9UHB4 597 aa17.11■□□□□ 0.33
RGP1-201ENST00000378078 ATP10AO60312 1499 aa17.11■□□□□ 0.33
RGP1-201ENST00000378078 MFAP3LO75121 409 aa17.11■□□□□ 0.33
RGP1-201ENST00000378078 ZC3H11AO75152 810 aaKnown RBP eCLIP17.11■□□□□ 0.33
RGP1-201ENST00000378078 KRT76Q01546 638 aa17.11■□□□□ 0.33
RGP1-201ENST00000378078 TRIM62Q9BVG3 475 aa17.11■□□□□ 0.33
RGP1-201ENST00000378078 KDM5DQ9BY66 1539 aa17.11■□□□□ 0.33
RGP1-201ENST00000378078 NUP160Q12769 1436 aa17.1■□□□□ 0.33
RGP1-201ENST00000378078 C3orf70A6NLC5 250 aaPredicted RBP17.1■□□□□ 0.33
RGP1-201ENST00000378078 hCG_1984214I3L0E3 225 aa17.1■□□□□ 0.33
RGP1-201ENST00000378078 ASAP2O43150 1006 aa17.1■□□□□ 0.33
RGP1-201ENST00000378078 MAPRE1Q15691 268 aaKnown RBP17.1■□□□□ 0.33
RGP1-201ENST00000378078 SHROOM1Q2M3G4 852 aaPredicted RBP17.1■□□□□ 0.33
RGP1-201ENST00000378078 PPP4R3CPQ6ZMV5 832 aa17.1■□□□□ 0.33
RGP1-201ENST00000378078 ZNF713Q8N859 430 aaPredicted RBP17.1■□□□□ 0.33
RGP1-201ENST00000378078 MTIF3Q9H2K0 278 aaKnown RBP17.1■□□□□ 0.33
RGP1-201ENST00000378078 RAB6BQ9NRW1 208 aa17.1■□□□□ 0.33
RGP1-201ENST00000378078 UTYO14607 1347 aa17.1■□□□□ 0.33
RGP1-201ENST00000378078 RHOBTB1O94844 696 aa17.1■□□□□ 0.33
RGP1-201ENST00000378078 PCDH8O95206 1070 aa17.1■□□□□ 0.33
RGP1-201ENST00000378078 GUCY1A2P33402 732 aa17.1■□□□□ 0.33
RGP1-201ENST00000378078 TNIP3Q96KP6 325 aa17.1■□□□□ 0.33
RGP1-201ENST00000378078 DDX56Q9NY93 547 aaKnown RBP17.1■□□□□ 0.33
RGP1-201ENST00000378078 MYO1CO00159 1063 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms