RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 STAG3L1P0CL83 205 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 PBX3P40426 434 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 CCT5P48643 541 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 CPLX4Q7Z7G2 160 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 KCTD6Q8NC69 237 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 BEGAINQ9BUH8 593 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 PLVAPQ9BX97 442 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 SMARCAD1Q9H4L7 1026 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 ANKZF1Q9H8Y5 726 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 SEL1LQ9UBV2 794 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 MYH8P13535 1937 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 TRIOBPQ9H2D6 2365 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 H3BQF6 201 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 LGALS2P05162 132 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 ZSCAN5DPP0CG00 497 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 CETPP11597 493 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 PBX1P40424 430 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 ARL1P40616 181 aaPredicted RBP8.62□□□□□ -1.03
CKAP2-203ENST00000378037 HSD17B4P51659 736 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 CHST13Q8NET6 341 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 GPR152Q8TDT2 470 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 RSAD2Q8WXG1 361 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 C18orf25Q96B23 403 aaPredicted RBP8.62□□□□□ -1.03
CKAP2-203ENST00000378037 MRIQ9BWK5 157 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 SMYD3Q9H7B4 428 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 RASAL2Q9UJF2 1139 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 MYH1P12882 1939 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 GLTPD2A6NH11 291 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 GH1P01241 217 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 RALAP11233 206 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 GUCY1A3Q02108 690 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 CYP24A1Q07973 514 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 MAPK7Q13164 816 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 TDRD10Q5VZ19 366 aaKnown RBP8.62□□□□□ -1.03
CKAP2-203ENST00000378037 CCDC137Q6PK04 289 aaKnown RBP8.62□□□□□ -1.03
CKAP2-203ENST00000378037 DEFB128Q7Z7B8 93 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 SCUBE3Q8IX30 993 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 SMAP1Q8IYB5 467 aaPredicted RBP8.62□□□□□ -1.03
CKAP2-203ENST00000378037 SYCE1Q8N0S2 351 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 REPS2Q8NFH8 660 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 BCAS4Q8TDM0 211 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 BRI3BPQ8WY22 251 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 KREMEN1Q96MU8 473 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 ACAP3Q96P50 834 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 INPP4AQ96PE3 977 aaPredicted RBP8.62□□□□□ -1.03
CKAP2-203ENST00000378037 PPP1R12CQ9BZL4 782 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 ARHGAP39Q9C0H5 1083 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 SNX25Q9H3E2 840 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 OLFML3Q9NRN5 406 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 FBXL5Q9UKA1 691 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 ADAM21Q9UKJ8 722 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 PLAAQ9Y263 795 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 ITIH6Q6UXX5 1313 aa8.62□□□□□ -1.03
CKAP2-203ENST00000378037 CCDC151A5D8V7 595 aa8.61□□□□□ -1.03
CKAP2-203ENST00000378037 NT5C1B-RDH14C9J2C7 533 aa8.61□□□□□ -1.03
CKAP2-203ENST00000378037 B3GAT3O94766 335 aa8.61□□□□□ -1.03
CKAP2-203ENST00000378037 ZRANB2O95218 330 aaKnown RBP eCLIP8.61□□□□□ -1.03
CKAP2-203ENST00000378037 CYP3A7P24462 503 aa8.61□□□□□ -1.03
CKAP2-203ENST00000378037 ZNF280AP59817 542 aaPredicted RBP8.61□□□□□ -1.03
CKAP2-203ENST00000378037 NAB2Q15742 525 aa8.61□□□□□ -1.03
CKAP2-203ENST00000378037 FKBP1CQ5VVH2 108 aa8.61□□□□□ -1.03
CKAP2-203ENST00000378037 RWDD4Q6NW29 188 aaKnown RBP8.61□□□□□ -1.03
CKAP2-203ENST00000378037 GPR142Q7Z601 462 aa8.61□□□□□ -1.03
CKAP2-203ENST00000378037 TPCN2Q8NHX9 752 aa8.61□□□□□ -1.03
CKAP2-203ENST00000378037 RAET1EQ8TD07 263 aa8.61□□□□□ -1.03
CKAP2-203ENST00000378037 RFFLQ8WZ73 363 aa8.61□□□□□ -1.03
CKAP2-203ENST00000378037 CISHQ9NSE2 258 aa8.61□□□□□ -1.03
CKAP2-203ENST00000378037 STK24Q9Y6E0 443 aa8.61□□□□□ -1.03
CKAP2-203ENST00000378037 IKBKGQ9Y6K9 419 aa8.61□□□□□ -1.03
CKAP2-203ENST00000378037 F8VP50 259 aa8.61□□□□□ -1.03
CKAP2-203ENST00000378037 PIK3CDO00329 1044 aa8.61□□□□□ -1.03
CKAP2-203ENST00000378037 AOC2O75106 756 aa8.61□□□□□ -1.03
CKAP2-203ENST00000378037 KIAA0754O94854 1291 aa8.61□□□□□ -1.03
CKAP2-203ENST00000378037 SRGAP2BP0DMP2 458 aa8.61□□□□□ -1.03
CKAP2-203ENST00000378037 ITKQ08881 620 aa8.61□□□□□ -1.03
CKAP2-203ENST00000378037 SDHAF4Q5VUM1 108 aa8.61□□□□□ -1.03
CKAP2-203ENST00000378037 TLK2Q86UE8 772 aa8.61□□□□□ -1.03
CKAP2-203ENST00000378037 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.61□□□□□ -1.03
CKAP2-203ENST00000378037 MDM1Q8TC05 714 aa8.61□□□□□ -1.03
CKAP2-203ENST00000378037 HPDLQ96IR7 371 aa8.61□□□□□ -1.03
CKAP2-203ENST00000378037 PCDHB18PQ96TA0 734 aa8.61□□□□□ -1.03
CKAP2-203ENST00000378037 B3GNT5Q9BYG0 378 aa8.61□□□□□ -1.03
CKAP2-203ENST00000378037 NXF3Q9H4D5 531 aaKnown RBP8.61□□□□□ -1.03
CKAP2-203ENST00000378037 DHX35Q9H5Z1 703 aaKnown RBP8.61□□□□□ -1.03
CKAP2-203ENST00000378037 MTRF1LQ9UGC7 380 aaKnown RBP8.61□□□□□ -1.03
CKAP2-203ENST00000378037 DBR1Q9UK59 544 aaKnown RBP8.61□□□□□ -1.03
CKAP2-203ENST00000378037 TRAF3IP3Q9Y228 551 aa8.61□□□□□ -1.03
CKAP2-203ENST00000378037 BZW2Q9Y6E2 419 aaKnown RBP8.61□□□□□ -1.03
CKAP2-203ENST00000378037 MYH7P12883 1935 aa8.61□□□□□ -1.03
CKAP2-203ENST00000378037 TREHO43280 583 aa8.61□□□□□ -1.03
CKAP2-203ENST00000378037 ETS1P14921 441 aa8.61□□□□□ -1.03
CKAP2-203ENST00000378037 MAN1A1P33908 653 aa8.61□□□□□ -1.03
CKAP2-203ENST00000378037 SEC24CP53992 1094 aa8.61□□□□□ -1.03
CKAP2-203ENST00000378037 YWHAGP61981 247 aaKnown RBP eCLIP8.61□□□□□ -1.03
CKAP2-203ENST00000378037 NNTQ13423 1086 aa8.61□□□□□ -1.03
CKAP2-203ENST00000378037 JADE1Q6IE81 842 aa8.61□□□□□ -1.03
CKAP2-203ENST00000378037 PLEKHH3Q7Z736 793 aa8.61□□□□□ -1.03
CKAP2-203ENST00000378037 PNMA8AQ86V59 439 aaPredicted RBP8.61□□□□□ -1.03
CKAP2-203ENST00000378037 ABI1Q8IZP0 508 aa8.61□□□□□ -1.03
CKAP2-203ENST00000378037 USP33Q8TEY7 942 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 278.3 ms