RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 XPNPEP1Q9NQW7 623 aa19.27■□□□□ 0.67
SF1-203ENST00000377387 RNF146Q9NTX7 359 aa19.27■□□□□ 0.67
SF1-203ENST00000377387 PNMA3Q9UL41 463 aa19.27■□□□□ 0.67
SF1-203ENST00000377387 USP15Q9Y4E8 981 aaPredicted RBP19.27■□□□□ 0.67
SF1-203ENST00000377387 ETS1P14921 441 aa19.26■□□□□ 0.67
SF1-203ENST00000377387 SFNP31947 248 aa19.26■□□□□ 0.67
SF1-203ENST00000377387 SNRPFP62306 86 aaKnown RBP19.26■□□□□ 0.67
SF1-203ENST00000377387 ZNF394Q53GI3 561 aa19.26■□□□□ 0.67
SF1-203ENST00000377387 CCDC60Q8IWA6 550 aaPredicted RBP19.26■□□□□ 0.67
SF1-203ENST00000377387 TEX2Q8IWB9 1127 aa19.26■□□□□ 0.67
SF1-203ENST00000377387 TAB3Q8N5C8 712 aaPredicted RBP19.26■□□□□ 0.67
SF1-203ENST00000377387 TRAIPQ9BWF2 469 aa19.26■□□□□ 0.67
SF1-203ENST00000377387 OSBPL8Q9BZF1 889 aa19.26■□□□□ 0.67
SF1-203ENST00000377387 UMODL1Q5DID0 1318 aa19.26■□□□□ 0.67
SF1-203ENST00000377387 TBC1D12O60347 775 aa19.26■□□□□ 0.67
SF1-203ENST00000377387 RPSAP08865 295 aaKnown RBP19.26■□□□□ 0.67
SF1-203ENST00000377387 P3H4Q92791 437 aa19.26■□□□□ 0.67
SF1-203ENST00000377387 IFT74Q96LB3 600 aa19.26■□□□□ 0.67
SF1-203ENST00000377387 FBXL18Q96ME1 805 aa19.26■□□□□ 0.67
SF1-203ENST00000377387 TGS1Q96RS0 853 aaKnown RBP19.26■□□□□ 0.67
SF1-203ENST00000377387 TRIM33Q9UPN9 1127 aa19.26■□□□□ 0.67
SF1-203ENST00000377387 STK38LQ9Y2H1 464 aa19.26■□□□□ 0.67
SF1-203ENST00000377387 TLR3O15455 904 aaKnown RBP19.25■□□□□ 0.67
SF1-203ENST00000377387 ZBED4O75132 1171 aa19.25■□□□□ 0.67
SF1-203ENST00000377387 GCNT1Q02742 428 aa19.25■□□□□ 0.67
SF1-203ENST00000377387 CXCL9Q07325 125 aa19.25■□□□□ 0.67
SF1-203ENST00000377387 MTM1Q13496 603 aa19.25■□□□□ 0.67
SF1-203ENST00000377387 P3H1Q32P28 736 aa19.25■□□□□ 0.67
SF1-203ENST00000377387 ZNF568Q3ZCX4 644 aa19.25■□□□□ 0.67
SF1-203ENST00000377387 GRK7Q8WTQ7 553 aa19.25■□□□□ 0.67
SF1-203ENST00000377387 TIPINQ9BVW5 301 aa19.25■□□□□ 0.67
SF1-203ENST00000377387 ZNF646O15015 1829 aaPredicted RBP19.25■□□□□ 0.67
SF1-203ENST00000377387 LRRIQ4A6NIV6 560 aa19.25■□□□□ 0.67
SF1-203ENST00000377387 POC1B-GALNT4F8VUJ3 575 aa19.25■□□□□ 0.67
SF1-203ENST00000377387 PROSCO94903 275 aa19.25■□□□□ 0.67
SF1-203ENST00000377387 ATP6V1G2O95670 118 aa19.25■□□□□ 0.67
SF1-203ENST00000377387 GNA15P30679 374 aa19.25■□□□□ 0.67
SF1-203ENST00000377387 PSMC4P43686 418 aa19.25■□□□□ 0.67
SF1-203ENST00000377387 RPL7AP62424 266 aaKnown RBP19.25■□□□□ 0.67
SF1-203ENST00000377387 TMEM174Q8WUU8 243 aa19.25■□□□□ 0.67
SF1-203ENST00000377387 FHDC1Q9C0D6 1143 aaPredicted RBP19.25■□□□□ 0.67
SF1-203ENST00000377387 ECT2Q9H8V3 914 aa19.25■□□□□ 0.67
SF1-203ENST00000377387 APOBEC3GQ9HC16 384 aaKnown RBP19.25■□□□□ 0.67
SF1-203ENST00000377387 NOD2Q9HC29 1040 aa19.25■□□□□ 0.67
SF1-203ENST00000377387 SLC12A4Q9UP95 1085 aa19.25■□□□□ 0.67
SF1-203ENST00000377387 COL2A1P02458 1487 aaPredicted RBP19.25■□□□□ 0.67
SF1-203ENST00000377387 PRKCEQ02156 737 aa19.24■□□□□ 0.67
SF1-203ENST00000377387 L3MBTL1Q9Y468 752 aa19.24■□□□□ 0.67
SF1-203ENST00000377387 PIAS1O75925 651 aa19.24■□□□□ 0.67
SF1-203ENST00000377387 FDX1P10109 184 aa19.24■□□□□ 0.67
SF1-203ENST00000377387 GIMAP7Q8NHV1 300 aa19.24■□□□□ 0.67
SF1-203ENST00000377387 FAM212AQ96EL1 285 aa19.24■□□□□ 0.67
SF1-203ENST00000377387 RBM15Q96T37 977 aaKnown RBP eCLIP19.24■□□□□ 0.674e-9■□□□□ 10.2
SF1-203ENST00000377387 CCDC134Q9H6E4 229 aa19.24■□□□□ 0.67
SF1-203ENST00000377387 STK32BQ9NY57 414 aa19.24■□□□□ 0.67
SF1-203ENST00000377387 AGO2Q9UKV8 859 aaKnown RBP19.24■□□□□ 0.67
SF1-203ENST00000377387 ZNF148Q9UQR1 794 aa19.24■□□□□ 0.67
SF1-203ENST00000377387 MGRN1O60291 552 aa19.24■□□□□ 0.67
SF1-203ENST00000377387 SUN1O94901 812 aa19.24■□□□□ 0.67
SF1-203ENST00000377387 MAMLD1Q13495 774 aa19.24■□□□□ 0.67
SF1-203ENST00000377387 LIN9Q5TKA1 542 aa19.24■□□□□ 0.67
SF1-203ENST00000377387 RHOT1Q8IXI2 618 aa19.24■□□□□ 0.67
SF1-203ENST00000377387 SLC17A8Q8NDX2 589 aa19.24■□□□□ 0.67
SF1-203ENST00000377387 SAYSD1Q9NPB0 183 aa19.24■□□□□ 0.67
SF1-203ENST00000377387 LOXHD1Q8IVV2 1947 aa19.23■□□□□ 0.67
SF1-203ENST00000377387 RASA4BC9J798 803 aa19.23■□□□□ 0.67
SF1-203ENST00000377387 RASA4O43374 803 aa19.23■□□□□ 0.67
SF1-203ENST00000377387 VNN1O95497 513 aa19.23■□□□□ 0.67
SF1-203ENST00000377387 RXRBP28702 533 aa19.23■□□□□ 0.67
SF1-203ENST00000377387 MON1BQ7L1V2 547 aa19.23■□□□□ 0.67
SF1-203ENST00000377387 MAIP1Q8WWC4 291 aa19.23■□□□□ 0.67
SF1-203ENST00000377387 PRCCQ92733 491 aaPredicted RBP19.23■□□□□ 0.67
SF1-203ENST00000377387 SLCO2A1Q92959 643 aa19.23■□□□□ 0.67
SF1-203ENST00000377387 ATP6V0A1Q93050 837 aa19.23■□□□□ 0.67
SF1-203ENST00000377387 MYCBPQ99417 103 aaPredicted RBP19.23■□□□□ 0.67
SF1-203ENST00000377387 NTPCRQ9BSD7 190 aaKnown RBP19.23■□□□□ 0.67
SF1-203ENST00000377387 CYP26B1Q9NR63 512 aa19.23■□□□□ 0.67
SF1-203ENST00000377387 NKIRAS1Q9NYS0 192 aa19.23■□□□□ 0.67
SF1-203ENST00000377387 ZNF541Q9H0D2 1346 aa19.23■□□□□ 0.67
SF1-203ENST00000377387 ATP5DP30049 168 aa19.23■□□□□ 0.67
SF1-203ENST00000377387 SLC1A1P43005 524 aa19.23■□□□□ 0.67
SF1-203ENST00000377387 PLCB3Q01970 1234 aa19.23■□□□□ 0.67
SF1-203ENST00000377387 FASTKD3Q14CZ7 662 aaKnown RBP19.23■□□□□ 0.67
SF1-203ENST00000377387 FAM182AQ5T1J6 154 aa19.23■□□□□ 0.67
SF1-203ENST00000377387 SNRNP48Q6IEG0 339 aaKnown RBP19.23■□□□□ 0.67
SF1-203ENST00000377387 SPATA21Q7Z572 469 aa19.23■□□□□ 0.67
SF1-203ENST00000377387 FAM83AQ86UY5 434 aa19.23■□□□□ 0.67
SF1-203ENST00000377387 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.23■□□□□ 0.67
SF1-203ENST00000377387 SPIRE2Q8WWL2 714 aa19.23■□□□□ 0.67
SF1-203ENST00000377387 RMDN2Q96LZ7 410 aa19.23■□□□□ 0.67
SF1-203ENST00000377387 TARS2Q9BW92 718 aaKnown RBP19.23■□□□□ 0.67
SF1-203ENST00000377387 HAPLN2Q9GZV7 340 aa19.23■□□□□ 0.67
SF1-203ENST00000377387 KIF9Q9HAQ2 790 aa19.23■□□□□ 0.67
SF1-203ENST00000377387 DNPEPQ9ULA0 475 aa19.23■□□□□ 0.67
SF1-203ENST00000377387 A8MUI8 341 aa19.22■□□□□ 0.67
SF1-203ENST00000377387 GOLGA8SH3BPF8 625 aa19.22■□□□□ 0.67
SF1-203ENST00000377387 GOLGA8MH3BSY2 632 aa19.22■□□□□ 0.67
SF1-203ENST00000377387 RGS20O76081 388 aa19.22■□□□□ 0.67
SF1-203ENST00000377387 IFNB1P01574 187 aa19.22■□□□□ 0.67
SF1-203ENST00000377387 CCND2P30279 289 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms