RNA–Protein interactions for RNA: ENST00000376188.1

PPP1R3F-202, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 2,443 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-202ENST00000376188 MARK3P27448 753 aa20.1■□□□□ 0.81
PPP1R3F-202ENST00000376188 SLC26A2P50443 739 aa20.1■□□□□ 0.81
PPP1R3F-202ENST00000376188 PTP4A2Q12974 167 aa20.1■□□□□ 0.81
PPP1R3F-202ENST00000376188 HSDL1Q3SXM5 330 aa20.1■□□□□ 0.81
PPP1R3F-202ENST00000376188 SMYD5Q6GMV2 418 aa20.1■□□□□ 0.81
PPP1R3F-202ENST00000376188 FOXR1Q6PIV2 292 aa20.1■□□□□ 0.81
PPP1R3F-202ENST00000376188 RNF149Q8NC42 400 aa20.1■□□□□ 0.81
PPP1R3F-202ENST00000376188 FBXO25Q8TCJ0 367 aa20.1■□□□□ 0.81
PPP1R3F-202ENST00000376188 UTRNP46939 3433 aa20.1■□□□□ 0.81
PPP1R3F-202ENST00000376188 DNAJC25-GNG10A0A024R161 153 aa20.1■□□□□ 0.81
PPP1R3F-202ENST00000376188 PROSCO94903 275 aa20.1■□□□□ 0.81
PPP1R3F-202ENST00000376188 RPL21P46778 160 aaKnown RBP20.1■□□□□ 0.81
PPP1R3F-202ENST00000376188 C1QBPQ07021 282 aaKnown RBP20.1■□□□□ 0.81
PPP1R3F-202ENST00000376188 PDCLQ13371 301 aa20.1■□□□□ 0.81
PPP1R3F-202ENST00000376188 KCTD19Q17RG1 926 aaPredicted RBP20.1■□□□□ 0.81
PPP1R3F-202ENST00000376188 SEZ6Q53EL9 994 aa20.1■□□□□ 0.81
PPP1R3F-202ENST00000376188 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.1■□□□□ 0.81
PPP1R3F-202ENST00000376188 MMP19Q99542 508 aa20.1■□□□□ 0.81
PPP1R3F-202ENST00000376188 C11orf70Q9BRQ4 267 aa20.1■□□□□ 0.81
PPP1R3F-202ENST00000376188 ANK1P16157 1881 aa20.09■□□□□ 0.81
PPP1R3F-202ENST00000376188 UMODL1Q5DID0 1318 aa20.09■□□□□ 0.81
PPP1R3F-202ENST00000376188 LOC102724159A0A0B4J2E5 919 aa20.09■□□□□ 0.81
PPP1R3F-202ENST00000376188 THAP12O43422 761 aa20.09■□□□□ 0.81
PPP1R3F-202ENST00000376188 ECEL1O95672 775 aa20.09■□□□□ 0.81
PPP1R3F-202ENST00000376188 SRGAP2CP0DJJ0 459 aa20.09■□□□□ 0.81
PPP1R3F-202ENST00000376188 OSBPP22059 807 aa20.09■□□□□ 0.81
PPP1R3F-202ENST00000376188 MAN1A1P33908 653 aa20.09■□□□□ 0.81
PPP1R3F-202ENST00000376188 TNFSF9P41273 254 aa20.09■□□□□ 0.81
PPP1R3F-202ENST00000376188 ZNF132P52740 706 aa20.09■□□□□ 0.81
PPP1R3F-202ENST00000376188 MCL1Q07820 350 aa20.09■□□□□ 0.81
PPP1R3F-202ENST00000376188 MKRN4PQ13434 485 aaPredicted RBP20.09■□□□□ 0.81
PPP1R3F-202ENST00000376188 PWP2Q15269 919 aaKnown RBP20.09■□□□□ 0.81
PPP1R3F-202ENST00000376188 SGO2Q562F6 1265 aa20.09■□□□□ 0.81
PPP1R3F-202ENST00000376188 ZBTB33Q86T24 672 aa20.09■□□□□ 0.81
PPP1R3F-202ENST00000376188 BCAS4Q8TDM0 211 aa20.09■□□□□ 0.81
PPP1R3F-202ENST00000376188 FBXO41Q8TF61 875 aa20.09■□□□□ 0.81
PPP1R3F-202ENST00000376188 PABPC3Q9H361 631 aaKnown RBP20.09■□□□□ 0.81
PPP1R3F-202ENST00000376188 TXNRD2Q9NNW7 524 aa20.09■□□□□ 0.81
PPP1R3F-202ENST00000376188 RBPJLQ9UBG7 517 aa20.09■□□□□ 0.81
PPP1R3F-202ENST00000376188 RSPH14Q9UHP6 348 aa20.09■□□□□ 0.81
PPP1R3F-202ENST00000376188 TTLL13PA6NNM8 815 aa20.08■□□□□ 0.81
PPP1R3F-202ENST00000376188 ZBTB42B2RXF5 422 aa20.08■□□□□ 0.81
PPP1R3F-202ENST00000376188 PSTPIP1O43586 416 aa20.08■□□□□ 0.81
PPP1R3F-202ENST00000376188 ZEB2O60315 1214 aa20.08■□□□□ 0.81
PPP1R3F-202ENST00000376188 NUDT17P0C025 328 aa20.08■□□□□ 0.81
PPP1R3F-202ENST00000376188 PMS2P54278 862 aa20.08■□□□□ 0.81
PPP1R3F-202ENST00000376188 IFFO1Q0D2I5 559 aa20.08■□□□□ 0.81
PPP1R3F-202ENST00000376188 PLCB4Q15147 1175 aa20.08■□□□□ 0.81
PPP1R3F-202ENST00000376188 FASTKD5Q7L8L6 764 aaKnown RBP20.08■□□□□ 0.81
PPP1R3F-202ENST00000376188 TRIM50Q86XT4 487 aa20.08■□□□□ 0.81
PPP1R3F-202ENST00000376188 DHX37Q8IY37 1157 aaKnown RBP20.08■□□□□ 0.81
PPP1R3F-202ENST00000376188 UBR7Q8N806 425 aa20.08■□□□□ 0.81
PPP1R3F-202ENST00000376188 SPATA33Q96N06 139 aa20.08■□□□□ 0.81
PPP1R3F-202ENST00000376188 TRIM7Q9C029 511 aa20.08■□□□□ 0.81
PPP1R3F-202ENST00000376188 EVPLQ92817 2033 aa20.08■□□□□ 0.81
PPP1R3F-202ENST00000376188 TFDP1Q14186 410 aa20.08■□□□□ 0.8
PPP1R3F-202ENST00000376188 PLEKHA7Q6IQ23 1121 aa20.08■□□□□ 0.8
PPP1R3F-202ENST00000376188 HOOK3Q86VS8 718 aa20.08■□□□□ 0.8
PPP1R3F-202ENST00000376188 PASD1Q8IV76 773 aa20.08■□□□□ 0.8
PPP1R3F-202ENST00000376188 R3HDMLQ9H3Y0 253 aa20.08■□□□□ 0.8
PPP1R3F-202ENST00000376188 MROH8Q9H579 483 aa20.08■□□□□ 0.8
PPP1R3F-202ENST00000376188 RNF181Q9P0P0 153 aa20.08■□□□□ 0.8
PPP1R3F-202ENST00000376188 CPSF3Q9UKF6 684 aaKnown RBP20.08■□□□□ 0.8
PPP1R3F-202ENST00000376188 MAMLD1Q13495 774 aa20.07■□□□□ 0.8
PPP1R3F-202ENST00000376188 TTLL12Q14166 644 aaPredicted RBP20.07■□□□□ 0.8
PPP1R3F-202ENST00000376188 DUOXA2Q1HG44 320 aa20.07■□□□□ 0.8
PPP1R3F-202ENST00000376188 KRT71Q3SY84 523 aa20.07■□□□□ 0.8
PPP1R3F-202ENST00000376188 TTC19Q6DKK2 380 aaPredicted RBP20.07■□□□□ 0.8
PPP1R3F-202ENST00000376188 SRLQ86TD4 932 aa20.07■□□□□ 0.8
PPP1R3F-202ENST00000376188 LRRC71Q8N4P6 559 aa20.07■□□□□ 0.8
PPP1R3F-202ENST00000376188 CDCA5Q96FF9 252 aa20.07■□□□□ 0.8
PPP1R3F-202ENST00000376188 DDX27Q96GQ7 796 aaKnown RBP20.07■□□□□ 0.8
PPP1R3F-202ENST00000376188 SMARCAD1Q9H4L7 1026 aa20.07■□□□□ 0.8
PPP1R3F-202ENST00000376188 ABLIM1O14639 778 aa20.07■□□□□ 0.8
PPP1R3F-202ENST00000376188 MDH1P40925 334 aaKnown RBP20.07■□□□□ 0.8
PPP1R3F-202ENST00000376188 CCDC62Q6P9F0 684 aa20.07■□□□□ 0.8
PPP1R3F-202ENST00000376188 RHOT1Q8IXI2 618 aa20.07■□□□□ 0.8
PPP1R3F-202ENST00000376188 ZNF606Q8WXB4 792 aa20.07■□□□□ 0.8
PPP1R3F-202ENST00000376188 MTMR12Q9C0I1 747 aa20.07■□□□□ 0.8
PPP1R3F-202ENST00000376188 NIF3L1Q9GZT8 377 aa20.07■□□□□ 0.8
PPP1R3F-202ENST00000376188 SRRM3A6NNA2 597 aaPredicted RBP20.06■□□□□ 0.8
PPP1R3F-202ENST00000376188 CFHP08603 1231 aa20.06■□□□□ 0.8
PPP1R3F-202ENST00000376188 SLMAPQ14BN4 828 aa20.06■□□□□ 0.8
PPP1R3F-202ENST00000376188 PPP1R7Q15435 360 aa20.06■□□□□ 0.8
PPP1R3F-202ENST00000376188 SGSM1Q2NKQ1 1148 aa20.06■□□□□ 0.8
PPP1R3F-202ENST00000376188 Q3C1V9 767 aa20.06■□□□□ 0.8
PPP1R3F-202ENST00000376188 C2CD6Q53TS8 623 aa20.06■□□□□ 0.8
PPP1R3F-202ENST00000376188 DENND2CQ68D51 928 aa20.06■□□□□ 0.8
PPP1R3F-202ENST00000376188 MPZL3Q6UWV2 235 aa20.06■□□□□ 0.8
PPP1R3F-202ENST00000376188 MMS22LQ6ZRQ5 1243 aa20.06■□□□□ 0.8
PPP1R3F-202ENST00000376188 TSHZ1Q6ZSZ6 1077 aa20.06■□□□□ 0.8
PPP1R3F-202ENST00000376188 SYDE1Q6ZW31 735 aaPredicted RBP20.06■□□□□ 0.8
PPP1R3F-202ENST00000376188 FBXO16Q8IX29 292 aaPredicted RBP20.06■□□□□ 0.8
PPP1R3F-202ENST00000376188 ART4Q93070 314 aa20.06■□□□□ 0.8
PPP1R3F-202ENST00000376188 PARVAQ9NVD7 372 aa20.06■□□□□ 0.8
PPP1R3F-202ENST00000376188 PTPN22Q9Y2R2 807 aa20.06■□□□□ 0.8
PPP1R3F-202ENST00000376188 MGAMO43451 1857 aa20.06■□□□□ 0.8
PPP1R3F-202ENST00000376188 ACKR2O00590 384 aa20.06■□□□□ 0.8
PPP1R3F-202ENST00000376188 LSM8O95777 96 aaKnown RBP20.06■□□□□ 0.8
PPP1R3F-202ENST00000376188 CST3P01034 146 aaPredicted RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms