RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 TMEM110-MUSTN1A8MSY1 372 aa13.74□□□□□ -0.21
MSH5-204ENST00000375755 TP73O15350 636 aa13.74□□□□□ -0.21
MSH5-204ENST00000375755 EYA4O95677 639 aa13.74□□□□□ -0.21
MSH5-204ENST00000375755 COILP38432 576 aaPredicted RBP13.74□□□□□ -0.21
MSH5-204ENST00000375755 SSR1P43307 286 aaKnown RBP13.74□□□□□ -0.21
MSH5-204ENST00000375755 PGM5Q15124 567 aa13.74□□□□□ -0.21
MSH5-204ENST00000375755 KNOP1Q1ED39 458 aaKnown RBP13.74□□□□□ -0.21
MSH5-204ENST00000375755 TBC1D25Q3MII6 688 aa13.74□□□□□ -0.21
MSH5-204ENST00000375755 SNRNP48Q6IEG0 339 aaKnown RBP13.74□□□□□ -0.21
MSH5-204ENST00000375755 OR52E8Q6IFG1 317 aa13.74□□□□□ -0.21
MSH5-204ENST00000375755 APOBEC3FQ8IUX4 373 aaKnown RBP13.74□□□□□ -0.21
MSH5-204ENST00000375755 APLFQ8IW19 511 aaPredicted RBP13.74□□□□□ -0.21
MSH5-204ENST00000375755 FAM136AQ96C01 138 aa13.74□□□□□ -0.21
MSH5-204ENST00000375755 RMDN3Q96TC7 470 aa13.74□□□□□ -0.21
MSH5-204ENST00000375755 DNAJC17Q9NVM6 304 aaKnown RBP13.74□□□□□ -0.21
MSH5-204ENST00000375755 RNF181Q9P0P0 153 aa13.74□□□□□ -0.21
MSH5-204ENST00000375755 CTDP1Q9Y5B0 961 aaPredicted RBP13.74□□□□□ -0.21
MSH5-204ENST00000375755 CLIC2O15247 247 aa13.74□□□□□ -0.21
MSH5-204ENST00000375755 RNF8O76064 485 aa13.74□□□□□ -0.21
MSH5-204ENST00000375755 T-ENOLP0DO92 83 aa13.74□□□□□ -0.21
MSH5-204ENST00000375755 HSPA6P17066 643 aa13.74□□□□□ -0.21
MSH5-204ENST00000375755 CHKAP35790 457 aa13.74□□□□□ -0.21
MSH5-204ENST00000375755 POLGP54098 1239 aaPredicted RBP13.74□□□□□ -0.21
MSH5-204ENST00000375755 LAMB3Q13751 1172 aa13.74□□□□□ -0.21
MSH5-204ENST00000375755 CLUL1Q15846 466 aa13.74□□□□□ -0.21
MSH5-204ENST00000375755 TSNAXIP1Q2TAA8 658 aa13.74□□□□□ -0.21
MSH5-204ENST00000375755 B3GNT9Q6UX72 402 aa13.74□□□□□ -0.21
MSH5-204ENST00000375755 RNF207Q6ZRF8 634 aa13.74□□□□□ -0.21
MSH5-204ENST00000375755 REPS2Q8NFH8 660 aa13.74□□□□□ -0.21
MSH5-204ENST00000375755 ITFG2Q969R8 447 aa13.74□□□□□ -0.21
MSH5-204ENST00000375755 IFT43Q96FT9 208 aa13.74□□□□□ -0.21
MSH5-204ENST00000375755 R3HDMLQ9H3Y0 253 aa13.74□□□□□ -0.21
MSH5-204ENST00000375755 DENND2DQ9H6A0 471 aaPredicted RBP13.74□□□□□ -0.21
MSH5-204ENST00000375755 RNF146Q9NTX7 359 aa13.74□□□□□ -0.21
MSH5-204ENST00000375755 SEPT11Q9NVA2 429 aaKnown RBP13.74□□□□□ -0.21
MSH5-204ENST00000375755 ZBED4O75132 1171 aa13.73□□□□□ -0.21
MSH5-204ENST00000375755 CETPP11597 493 aa13.73□□□□□ -0.21
MSH5-204ENST00000375755 COG2Q14746 738 aa13.73□□□□□ -0.21
MSH5-204ENST00000375755 DRAP1Q14919 205 aaPredicted RBP13.73□□□□□ -0.21
MSH5-204ENST00000375755 UGCGQ16739 394 aa13.73□□□□□ -0.21
MSH5-204ENST00000375755 TREML2Q5T2D2 321 aa13.73□□□□□ -0.21
MSH5-204ENST00000375755 FOXB2Q5VYV0 432 aa13.73□□□□□ -0.21
MSH5-204ENST00000375755 C1orf186Q6ZWK4 172 aa13.73□□□□□ -0.21
MSH5-204ENST00000375755 SYT17Q9BSW7 474 aa13.73□□□□□ -0.21
MSH5-204ENST00000375755 TEKT3Q9BXF9 490 aa13.73□□□□□ -0.21
MSH5-204ENST00000375755 TBK1Q9UHD2 729 aa13.73□□□□□ -0.21
MSH5-204ENST00000375755 MYH11P35749 1972 aa13.73□□□□□ -0.21
MSH5-204ENST00000375755 TESPA1A2RU30 521 aaPredicted RBP13.73□□□□□ -0.21
MSH5-204ENST00000375755 LGR5O75473 907 aa13.73□□□□□ -0.21
MSH5-204ENST00000375755 ATP5HO75947 161 aa13.73□□□□□ -0.21
MSH5-204ENST00000375755 GCNT3O95395 438 aa13.73□□□□□ -0.21
MSH5-204ENST00000375755 ATP5DP30049 168 aa13.73□□□□□ -0.21
MSH5-204ENST00000375755 VGLL4Q14135 290 aa13.73□□□□□ -0.21
MSH5-204ENST00000375755 SETDB1Q15047 1291 aa13.73□□□□□ -0.21
MSH5-204ENST00000375755 ZNF449Q6P9G9 518 aa13.73□□□□□ -0.21
MSH5-204ENST00000375755 CYFIP1Q7L576 1253 aa13.73□□□□□ -0.21
MSH5-204ENST00000375755 EZH1Q92800 747 aaPredicted RBP13.73□□□□□ -0.21
MSH5-204ENST00000375755 KIFAP3Q92845 792 aa13.73□□□□□ -0.21
MSH5-204ENST00000375755 GRAMD1AQ96CP6 724 aa13.73□□□□□ -0.21
MSH5-204ENST00000375755 EPAS1Q99814 870 aa13.73□□□□□ -0.21
MSH5-204ENST00000375755 ZSWIM1Q9BR11 485 aa13.73□□□□□ -0.21
MSH5-204ENST00000375755 TRIM4Q9C037 500 aa13.73□□□□□ -0.21
MSH5-204ENST00000375755 AGO4Q9HCK5 861 aaKnown RBP13.73□□□□□ -0.21
MSH5-204ENST00000375755 ZNF214Q9UL59 606 aaPredicted RBP13.73□□□□□ -0.21
MSH5-204ENST00000375755 KIAA1217Q5T5P2 1943 aa13.73□□□□□ -0.21
MSH5-204ENST00000375755 PASKQ96RG2 1323 aa13.73□□□□□ -0.21
MSH5-204ENST00000375755 PYGMP11217 842 aa13.72□□□□□ -0.21
MSH5-204ENST00000375755 POLE2P56282 527 aa13.72□□□□□ -0.21
MSH5-204ENST00000375755 FSTL1Q12841 308 aa13.72□□□□□ -0.21
MSH5-204ENST00000375755 MTMR1Q13613 665 aa13.72□□□□□ -0.21
MSH5-204ENST00000375755 MUM1Q2TAK8 710 aa13.72□□□□□ -0.21
MSH5-204ENST00000375755 APBB1IPQ7Z5R6 666 aaPredicted RBP13.72□□□□□ -0.21
MSH5-204ENST00000375755 SRRM1Q8IYB3 904 aaKnown RBP13.72□□□□□ -0.21
MSH5-204ENST00000375755 INPP5DQ92835 1189 aa13.72□□□□□ -0.21
MSH5-204ENST00000375755 ZNF333Q96JL9 665 aa13.72□□□□□ -0.21
MSH5-204ENST00000375755 PXMP2Q9NR77 195 aa13.72□□□□□ -0.21
MSH5-204ENST00000375755 NMRK1Q9NWW6 199 aa13.72□□□□□ -0.21
MSH5-204ENST00000375755 CHORDC1Q9UHD1 332 aaPredicted RBP13.72□□□□□ -0.21
MSH5-204ENST00000375755 CBX6O95503 412 aa13.72□□□□□ -0.21
MSH5-204ENST00000375755 NR3C1P04150 777 aa13.72□□□□□ -0.21
MSH5-204ENST00000375755 YARSP54577 528 aaKnown RBP13.72□□□□□ -0.21
MSH5-204ENST00000375755 CALCOCO2Q13137 446 aa13.72□□□□□ -0.21
MSH5-204ENST00000375755 KYNUQ16719 465 aa13.72□□□□□ -0.21
MSH5-204ENST00000375755 WASHC2DQ5SRD0 308 aa13.72□□□□□ -0.21
MSH5-204ENST00000375755 EPM2AIP1Q7L775 607 aaPredicted RBP13.72□□□□□ -0.21
MSH5-204ENST00000375755 MYCT1Q8N699 235 aa13.72□□□□□ -0.21
MSH5-204ENST00000375755 UBL4BQ8N7F7 174 aa13.72□□□□□ -0.21
MSH5-204ENST00000375755 RBBP8NLQ8NC74 664 aaPredicted RBP13.72□□□□□ -0.21
MSH5-204ENST00000375755 SPOCK2Q92563 424 aa13.72□□□□□ -0.21
MSH5-204ENST00000375755 BORCS6Q96GS4 357 aa13.72□□□□□ -0.21
MSH5-204ENST00000375755 GORASP1Q9BQQ3 440 aa13.72□□□□□ -0.21
MSH5-204ENST00000375755 GPR88Q9GZN0 384 aa13.72□□□□□ -0.21
MSH5-204ENST00000375755 PCMTD2Q9NV79 361 aa13.72□□□□□ -0.21
MSH5-204ENST00000375755 NKIRAS1Q9NYS0 192 aa13.72□□□□□ -0.21
MSH5-204ENST00000375755 DNAJC12Q9UKB3 198 aa13.72□□□□□ -0.21
MSH5-204ENST00000375755 AFG3L2Q9Y4W6 797 aa13.72□□□□□ -0.21
MSH5-204ENST00000375755 PCDHB13Q9Y5F0 798 aa13.72□□□□□ -0.21
MSH5-204ENST00000375755 UBIAD1Q9Y5Z9 338 aa13.72□□□□□ -0.21
MSH5-204ENST00000375755 ANKRD62A6NC57 917 aa13.72□□□□□ -0.21
MSH5-204ENST00000375755 PYGLP06737 847 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms