RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 CRYMQ14894 314 aa14.91□□□□□ -0.02
MSH5-202ENST00000375740 CLUL1Q15846 466 aa14.91□□□□□ -0.02
MSH5-202ENST00000375740 SEC14L1Q92503 715 aa14.91□□□□□ -0.02
MSH5-202ENST00000375740 GLG1Q92896 1179 aa14.91□□□□□ -0.02
MSH5-202ENST00000375740 TBC1D31Q96DN5 1066 aa14.91□□□□□ -0.02
MSH5-202ENST00000375740 FGD4Q96M96 766 aa14.91□□□□□ -0.02
MSH5-202ENST00000375740 APOBEC3GQ9HC16 384 aaKnown RBP14.91□□□□□ -0.02
MSH5-202ENST00000375740 PLAAQ9Y263 795 aa14.91□□□□□ -0.02
MSH5-202ENST00000375740 PCDHB2Q9Y5E7 798 aa14.91□□□□□ -0.02
MSH5-202ENST00000375740 CNTNAP2Q9UHC6 1331 aa14.91□□□□□ -0.02
MSH5-202ENST00000375740 SPDYE5A6NIY4 337 aa14.91□□□□□ -0.02
MSH5-202ENST00000375740 SPOPO43791 374 aa14.91□□□□□ -0.02
MSH5-202ENST00000375740 PYGMP11217 842 aa14.91□□□□□ -0.02
MSH5-202ENST00000375740 FLT3P36888 993 aa14.91□□□□□ -0.02
MSH5-202ENST00000375740 DR1Q01658 176 aa14.91□□□□□ -0.02
MSH5-202ENST00000375740 NAA25Q14CX7 972 aa14.91□□□□□ -0.02
MSH5-202ENST00000375740 PPP2R5EQ16537 467 aa14.91□□□□□ -0.02
MSH5-202ENST00000375740 HSDL1Q3SXM5 330 aa14.91□□□□□ -0.02
MSH5-202ENST00000375740 OR5B17Q8NGF7 314 aa14.91□□□□□ -0.02
MSH5-202ENST00000375740 CPA5Q8WXQ8 436 aa14.91□□□□□ -0.02
MSH5-202ENST00000375740 CDCA5Q96FF9 252 aa14.91□□□□□ -0.02
MSH5-202ENST00000375740 TRIM31Q9BZY9 425 aa14.91□□□□□ -0.02
MSH5-202ENST00000375740 AGTPBP1Q9UPW5 1226 aa14.91□□□□□ -0.02
MSH5-202ENST00000375740 ACO1P21399 889 aaKnown RBP14.9□□□□□ -0.02
MSH5-202ENST00000375740 SCTRP47872 440 aa14.9□□□□□ -0.02
MSH5-202ENST00000375740 SCARA3Q6AZY7 606 aa14.9□□□□□ -0.02
MSH5-202ENST00000375740 PHLDB2Q86SQ0 1253 aa14.9□□□□□ -0.02
MSH5-202ENST00000375740 TRIM50Q86XT4 487 aa14.9□□□□□ -0.02
MSH5-202ENST00000375740 EGFL6Q8IUX8 553 aa14.9□□□□□ -0.02
MSH5-202ENST00000375740 ZDHHC14Q8IZN3 488 aa14.9□□□□□ -0.02
MSH5-202ENST00000375740 CGRRF1Q99675 332 aa14.9□□□□□ -0.02
MSH5-202ENST00000375740 GPR20Q99678 358 aa14.9□□□□□ -0.02
MSH5-202ENST00000375740 TRIM6Q9C030 488 aaPredicted RBP14.9□□□□□ -0.02
MSH5-202ENST00000375740 FAM114A2Q9NRY5 505 aa14.9□□□□□ -0.02
MSH5-202ENST00000375740 PCDHA3Q9Y5H8 950 aa14.9□□□□□ -0.02
MSH5-202ENST00000375740 SRGAP2CP0DJJ0 459 aa14.9□□□□□ -0.02
MSH5-202ENST00000375740 HSD17B3P37058 310 aa14.9□□□□□ -0.02
MSH5-202ENST00000375740 INHBEP58166 350 aa14.9□□□□□ -0.02
MSH5-202ENST00000375740 BPIFB4P59827 614 aa14.9□□□□□ -0.02
MSH5-202ENST00000375740 MKRN4PQ13434 485 aaPredicted RBP14.9□□□□□ -0.02
MSH5-202ENST00000375740 CUL2Q13617 745 aa14.9□□□□□ -0.02
MSH5-202ENST00000375740 IER5Q5VY09 327 aa14.9□□□□□ -0.02
MSH5-202ENST00000375740 ZBTB33Q86T24 672 aa14.9□□□□□ -0.02
MSH5-202ENST00000375740 CD302Q8IX05 232 aa14.9□□□□□ -0.02
MSH5-202ENST00000375740 MCOLN2Q8IZK6 566 aa14.9□□□□□ -0.02
MSH5-202ENST00000375740 FHDC1Q9C0D6 1143 aaPredicted RBP14.9□□□□□ -0.02
MSH5-202ENST00000375740 GMNCA6NCL1 334 aa14.89□□□□□ -0.03
MSH5-202ENST00000375740 CLDN3O15551 220 aa14.89□□□□□ -0.03
MSH5-202ENST00000375740 CTNNA2P26232 953 aa14.89□□□□□ -0.03
MSH5-202ENST00000375740 CDC25CP30307 473 aa14.89□□□□□ -0.03
MSH5-202ENST00000375740 CTNNA1P35221 906 aaKnown RBP14.89□□□□□ -0.03
MSH5-202ENST00000375740 CELF3Q5SZQ8 465 aaKnown RBP14.89□□□□□ -0.03
MSH5-202ENST00000375740 SEL1L2Q5TEA6 688 aa14.89□□□□□ -0.03
MSH5-202ENST00000375740 PRELID2Q8N945 189 aa14.89□□□□□ -0.03
MSH5-202ENST00000375740 FAM167AQ96KS9 214 aa14.89□□□□□ -0.03
MSH5-202ENST00000375740 MPHOSPH6Q99547 160 aaKnown RBP14.89□□□□□ -0.03
MSH5-202ENST00000375740 KCNH4Q9UQ05 1017 aa14.89□□□□□ -0.03
MSH5-202ENST00000375740 PCDHB4Q9Y5E5 795 aa14.89□□□□□ -0.03
MSH5-202ENST00000375740 LRRC37A2A6NM11 1700 aa14.89□□□□□ -0.03
MSH5-202ENST00000375740 MSCO60682 206 aa14.89□□□□□ -0.03
MSH5-202ENST00000375740 EZRP15311 586 aaKnown RBP14.89□□□□□ -0.03
MSH5-202ENST00000375740 TNFSF9P41273 254 aa14.89□□□□□ -0.03
MSH5-202ENST00000375740 LAMTOR4Q0VGL1 99 aa14.89□□□□□ -0.03
MSH5-202ENST00000375740 MOGSQ13724 837 aa14.89□□□□□ -0.03
MSH5-202ENST00000375740 UAP1Q16222 522 aaPredicted RBP14.89□□□□□ -0.03
MSH5-202ENST00000375740 ZNF677Q86XU0 584 aa14.89□□□□□ -0.03
MSH5-202ENST00000375740 LRRC71Q8N4P6 559 aa14.89□□□□□ -0.03
MSH5-202ENST00000375740 RNF217Q8TC41 542 aa14.89□□□□□ -0.03
MSH5-202ENST00000375740 LRRC45Q96CN5 670 aa14.89□□□□□ -0.03
MSH5-202ENST00000375740 SEC16BQ96JE7 1060 aa14.89□□□□□ -0.03
MSH5-202ENST00000375740 MMP19Q99542 508 aa14.89□□□□□ -0.03
MSH5-202ENST00000375740 ERP44Q9BS26 406 aa14.89□□□□□ -0.03
MSH5-202ENST00000375740 TCHPQ9BT92 498 aa14.89□□□□□ -0.03
MSH5-202ENST00000375740 RAB17Q9H0T7 212 aa14.89□□□□□ -0.03
MSH5-202ENST00000375740 NUB1Q9Y5A7 615 aa14.89□□□□□ -0.03
MSH5-202ENST00000375740 TCRBV7S2A1N4TA0A589 114 aa14.89□□□□□ -0.03
MSH5-202ENST00000375740 EME2A4GXA9 379 aaPredicted RBP14.89□□□□□ -0.03
MSH5-202ENST00000375740 DCDC2CA8MYV0 355 aa14.89□□□□□ -0.03
MSH5-202ENST00000375740 NOP56O00567 594 aaKnown RBP14.89□□□□□ -0.03
MSH5-202ENST00000375740 CFHP08603 1231 aa14.89□□□□□ -0.03
MSH5-202ENST00000375740 HSPA6P17066 643 aa14.89□□□□□ -0.03
MSH5-202ENST00000375740 KCTD2Q14681 263 aa14.89□□□□□ -0.03
MSH5-202ENST00000375740 C2CD6Q53TS8 623 aa14.89□□□□□ -0.03
MSH5-202ENST00000375740 TMEM63BQ5T3F8 832 aa14.89□□□□□ -0.03
MSH5-202ENST00000375740 WDR78Q5VTH9 848 aa14.89□□□□□ -0.03
MSH5-202ENST00000375740 TMEM270Q6UE05 265 aa14.89□□□□□ -0.03
MSH5-202ENST00000375740 ZPBP2Q6X784 338 aa14.89□□□□□ -0.03
MSH5-202ENST00000375740 ATP8B4Q8TF62 1192 aa14.89□□□□□ -0.03
MSH5-202ENST00000375740 MAGOHBQ96A72 148 aaKnown RBP14.89□□□□□ -0.03
MSH5-202ENST00000375740 C18orf8Q96DM3 657 aa14.89□□□□□ -0.03
MSH5-202ENST00000375740 TMBIM4Q9HC24 238 aa14.89□□□□□ -0.03
MSH5-202ENST00000375740 LRRC4CQ9HCJ2 640 aa14.89□□□□□ -0.03
MSH5-202ENST00000375740 ANAPC7Q9UJX3 599 aa14.89□□□□□ -0.03
MSH5-202ENST00000375740 GGA2Q9UJY4 613 aa14.89□□□□□ -0.03
MSH5-202ENST00000375740 UMODL1Q5DID0 1318 aa14.88□□□□□ -0.03
MSH5-202ENST00000375740 DNAJC25-GNG10A0A024R161 153 aa14.88□□□□□ -0.03
MSH5-202ENST00000375740 FAM187AA6NFU0 413 aa14.88□□□□□ -0.03
MSH5-202ENST00000375740 ZBTB42B2RXF5 422 aa14.88□□□□□ -0.03
MSH5-202ENST00000375740 PHF2O75151 1096 aa14.88□□□□□ -0.03
MSH5-202ENST00000375740 LGR5O75473 907 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms