RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 BACE2Q9Y5Z0 518 aa13.31□□□□□ -0.28
LSM2-208ENST00000375661 TCHHQ07283 1943 aa13.31□□□□□ -0.28
LSM2-208ENST00000375661 COL4A2P08572 1712 aa13.3□□□□□ -0.28
LSM2-208ENST00000375661 DNAH14Q0VDD8 3507 aa13.3□□□□□ -0.28
LSM2-208ENST00000375661 FAM237AA0A1B0GTK4 181 aa13.3□□□□□ -0.28
LSM2-208ENST00000375661 A0A1W2PQ27 194 aa13.3□□□□□ -0.28
LSM2-208ENST00000375661 A0A1W2PQ64 194 aa13.3□□□□□ -0.28
LSM2-208ENST00000375661 A0A1W2PQD8 194 aa13.3□□□□□ -0.28
LSM2-208ENST00000375661 ARHGEF35A5YM69 484 aa13.3□□□□□ -0.28
LSM2-208ENST00000375661 ADAM12O43184 909 aa13.3□□□□□ -0.28
LSM2-208ENST00000375661 USO1O60763 962 aaKnown RBP13.3□□□□□ -0.28
LSM2-208ENST00000375661 PLA2G4BP0C869 781 aa13.3□□□□□ -0.28
LSM2-208ENST00000375661 CYP11B2P19099 503 aa13.3□□□□□ -0.28
LSM2-208ENST00000375661 TARSP26639 723 aaKnown RBP13.3□□□□□ -0.28
LSM2-208ENST00000375661 OR1D2P34982 312 aa13.3□□□□□ -0.28
LSM2-208ENST00000375661 TXLNAP40222 546 aa13.3□□□□□ -0.28
LSM2-208ENST00000375661 ADCY1Q08828 1119 aa13.3□□□□□ -0.28
LSM2-208ENST00000375661 PRPF4BQ13523 1007 aaKnown RBP13.3□□□□□ -0.28
LSM2-208ENST00000375661 MCM6Q14566 821 aa13.3□□□□□ -0.28
LSM2-208ENST00000375661 E2F4Q16254 413 aa13.3□□□□□ -0.28
LSM2-208ENST00000375661 DCAF4L1Q3SXM0 396 aa13.3□□□□□ -0.28
LSM2-208ENST00000375661 RRAGBQ5VZM2 374 aa13.3□□□□□ -0.28
LSM2-208ENST00000375661 RINT1Q6NUQ1 792 aa13.3□□□□□ -0.28
LSM2-208ENST00000375661 MAMSTRQ6ZN01 415 aa13.3□□□□□ -0.28
LSM2-208ENST00000375661 TPRG1Q6ZUI0 275 aa13.3□□□□□ -0.28
LSM2-208ENST00000375661 ANKS3Q6ZW76 656 aa13.3□□□□□ -0.28
LSM2-208ENST00000375661 PDILTQ8N807 584 aa13.3□□□□□ -0.28
LSM2-208ENST00000375661 RASSF8Q8NHQ8 419 aa13.3□□□□□ -0.28
LSM2-208ENST00000375661 ELSPBP1Q96BH3 223 aa13.3□□□□□ -0.28
LSM2-208ENST00000375661 RUSC1Q9BVN2 902 aa13.3□□□□□ -0.28
LSM2-208ENST00000375661 HCFC1R1Q9NWW0 138 aa13.3□□□□□ -0.28
LSM2-208ENST00000375661 MRPS23Q9Y3D9 190 aaKnown RBP13.3□□□□□ -0.28
LSM2-208ENST00000375661 PDCD11Q14690 1871 aaKnown RBP13.29□□□□□ -0.28
LSM2-208ENST00000375661 CITO14578 2027 aa13.29□□□□□ -0.28
LSM2-208ENST00000375661 A0A1B0GVL5 298 aa13.29□□□□□ -0.28
LSM2-208ENST00000375661 ARHGEF37A1IGU5 675 aa13.29□□□□□ -0.28
LSM2-208ENST00000375661 ACKR2O00590 384 aa13.29□□□□□ -0.28
LSM2-208ENST00000375661 MAN2B1O00754 1011 aa13.29□□□□□ -0.28
LSM2-208ENST00000375661 TRAPPC3O43617 180 aa13.29□□□□□ -0.28
LSM2-208ENST00000375661 MICAL2O94851 1124 aa13.29□□□□□ -0.28
LSM2-208ENST00000375661 NAMPTP43490 491 aa13.29□□□□□ -0.28
LSM2-208ENST00000375661 ATXN1P54253 815 aaKnown RBP13.29□□□□□ -0.28
LSM2-208ENST00000375661 NRLP54845 237 aa13.29□□□□□ -0.28
LSM2-208ENST00000375661 PPP2R5DQ14738 602 aa13.29□□□□□ -0.28
LSM2-208ENST00000375661 TMEM132AQ24JP5 1023 aa13.29□□□□□ -0.28
LSM2-208ENST00000375661 CCDC73Q6ZRK6 1079 aa13.29□□□□□ -0.28
LSM2-208ENST00000375661 CLEC17AQ6ZS10 378 aa13.29□□□□□ -0.28
LSM2-208ENST00000375661 C1orf186Q6ZWK4 172 aa13.29□□□□□ -0.28
LSM2-208ENST00000375661 APBB1IPQ7Z5R6 666 aaPredicted RBP13.29□□□□□ -0.28
LSM2-208ENST00000375661 RTKNQ9BST9 563 aa13.29□□□□□ -0.28
LSM2-208ENST00000375661 POLD4Q9HCU8 107 aa13.29□□□□□ -0.28
LSM2-208ENST00000375661 GPRC5CQ9NQ84 441 aa13.29□□□□□ -0.28
LSM2-208ENST00000375661 FAM13BQ9NYF5 915 aa13.29□□□□□ -0.28
LSM2-208ENST00000375661 CDV3Q9UKY7 258 aaKnown RBP13.29□□□□□ -0.28
LSM2-208ENST00000375661 HPSEQ9Y251 543 aa13.29□□□□□ -0.28
LSM2-208ENST00000375661 CDY1Q9Y6F8 540 aa13.29□□□□□ -0.28
LSM2-208ENST00000375661 TICRRQ7Z2Z1 1910 aa13.29□□□□□ -0.28
LSM2-208ENST00000375661 WDR87Q6ZQQ6 2873 aa13.28□□□□□ -0.28
LSM2-208ENST00000375661 POLR2DO15514 142 aaKnown RBP13.28□□□□□ -0.28
LSM2-208ENST00000375661 B3GAT3O94766 335 aa13.28□□□□□ -0.28
LSM2-208ENST00000375661 PRKCBP05771 671 aa13.28□□□□□ -0.28
LSM2-208ENST00000375661 RHOP08100 348 aa13.28□□□□□ -0.28
LSM2-208ENST00000375661 PFKFB1P16118 471 aa13.28□□□□□ -0.28
LSM2-208ENST00000375661 PTPN2P17706 415 aa13.28□□□□□ -0.28
LSM2-208ENST00000375661 CD72P21854 359 aa13.28□□□□□ -0.28
LSM2-208ENST00000375661 FZD5Q13467 585 aa13.28□□□□□ -0.28
LSM2-208ENST00000375661 DHX8Q14562 1220 aaKnown RBP13.28□□□□□ -0.28
LSM2-208ENST00000375661 PPP2R5AQ15172 486 aa13.28□□□□□ -0.28
LSM2-208ENST00000375661 ARSHQ5FYA8 562 aa13.28□□□□□ -0.28
LSM2-208ENST00000375661 MAEAQ7L5Y9 396 aa13.28□□□□□ -0.28
LSM2-208ENST00000375661 ZNF461Q8TAF7 563 aa13.28□□□□□ -0.28
LSM2-208ENST00000375661 DEPTORQ8TB45 409 aa13.28□□□□□ -0.28
LSM2-208ENST00000375661 LARP4BQ92615 738 aaKnown RBP13.28□□□□□ -0.28
LSM2-208ENST00000375661 MCRS1Q96EZ8 462 aa13.28□□□□□ -0.28
LSM2-208ENST00000375661 PPP1R10Q96QC0 940 aaKnown RBP13.28□□□□□ -0.28
LSM2-208ENST00000375661 CCDC113Q9H0I3 377 aa13.28□□□□□ -0.28
LSM2-208ENST00000375661 CHRDQ9H2X0 955 aa13.28□□□□□ -0.28
LSM2-208ENST00000375661 GOLPH3LQ9H4A5 285 aa13.28□□□□□ -0.28
LSM2-208ENST00000375661 TRPV5Q9NQA5 729 aa13.28□□□□□ -0.28
LSM2-208ENST00000375661 STK17AQ9UEE5 414 aa13.28□□□□□ -0.28
LSM2-208ENST00000375661 GMEB2Q9UKD1 530 aa13.28□□□□□ -0.28
LSM2-208ENST00000375661 RALGAPA1Q6GYQ0 2036 aa13.28□□□□□ -0.28
LSM2-208ENST00000375661 FRYLO94915 3013 aa13.28□□□□□ -0.28
LSM2-208ENST00000375661 NPHP3-ACAD11A0A0J9YXS1 232 aa13.27□□□□□ -0.29
LSM2-208ENST00000375661 TTLL13PA6NNM8 815 aa13.27□□□□□ -0.29
LSM2-208ENST00000375661 ZNF197O14709 1029 aa13.27□□□□□ -0.29
LSM2-208ENST00000375661 GADD45BO75293 160 aaPredicted RBP13.27□□□□□ -0.29
LSM2-208ENST00000375661 LRG1P02750 347 aa13.27□□□□□ -0.29
LSM2-208ENST00000375661 STAT6P42226 847 aa13.27□□□□□ -0.29
LSM2-208ENST00000375661 NDUFA8P51970 172 aa13.27□□□□□ -0.29
LSM2-208ENST00000375661 EFNA5P52803 228 aa13.27□□□□□ -0.29
LSM2-208ENST00000375661 MAPK7Q13164 816 aa13.27□□□□□ -0.29
LSM2-208ENST00000375661 UPP1Q16831 310 aa13.27□□□□□ -0.29
LSM2-208ENST00000375661 SLC5A9Q2M3M2 681 aa13.27□□□□□ -0.29
LSM2-208ENST00000375661 SLC8B1Q6J4K2 584 aa13.27□□□□□ -0.29
LSM2-208ENST00000375661 DAW1Q8N136 415 aa13.27□□□□□ -0.29
LSM2-208ENST00000375661 FSIP1Q8NA03 581 aa13.27□□□□□ -0.29
LSM2-208ENST00000375661 ING5Q8WYH8 240 aa13.27□□□□□ -0.29
LSM2-208ENST00000375661 DHX58Q96C10 678 aa13.27□□□□□ -0.29
LSM2-208ENST00000375661 DDX27Q96GQ7 796 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms