RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 TSPAN18Q96SJ8 248 aa17.31■□□□□ 0.36
C11orf88-202ENST00000375618 CLSTN3Q9BQT9 956 aa17.31■□□□□ 0.36
C11orf88-202ENST00000375618 APOL5Q9BWW9 433 aa17.31■□□□□ 0.36
C11orf88-202ENST00000375618 EMILIN2Q9BXX0 1053 aa17.31■□□□□ 0.36
C11orf88-202ENST00000375618 S1PR5Q9H228 398 aa17.31■□□□□ 0.36
C11orf88-202ENST00000375618 DMAC2Q9NW81 257 aa17.31■□□□□ 0.36
C11orf88-202ENST00000375618 CD207Q9UJ71 328 aa17.31■□□□□ 0.36
C11orf88-202ENST00000375618 KIAA0391O15091 583 aaKnown RBP17.3■□□□□ 0.36
C11orf88-202ENST00000375618 MBTPS2O43462 519 aa17.3■□□□□ 0.36
C11orf88-202ENST00000375618 MCM4P33991 863 aa17.3■□□□□ 0.36
C11orf88-202ENST00000375618 UBE2HP62256 183 aa17.3■□□□□ 0.36
C11orf88-202ENST00000375618 SNRPFP62306 86 aaKnown RBP17.3■□□□□ 0.36
C11orf88-202ENST00000375618 TFAMQ00059 246 aaKnown RBP17.3■□□□□ 0.36
C11orf88-202ENST00000375618 ELAVL2Q12926 359 aaKnown RBP17.3■□□□□ 0.36
C11orf88-202ENST00000375618 PSMD5Q16401 504 aa17.3■□□□□ 0.36
C11orf88-202ENST00000375618 PTCRAQ6ISU1 281 aaPredicted RBP17.3■□□□□ 0.36
C11orf88-202ENST00000375618 HS2ST1Q7LGA3 356 aa17.3■□□□□ 0.36
C11orf88-202ENST00000375618 GPR65Q8IYL9 337 aa17.3■□□□□ 0.36
C11orf88-202ENST00000375618 C12orf76Q8N812 135 aaPredicted RBP17.3■□□□□ 0.36
C11orf88-202ENST00000375618 C1orf127Q8N9H9 656 aa17.3■□□□□ 0.36
C11orf88-202ENST00000375618 XXYLT1Q8NBI6 393 aa17.3■□□□□ 0.36
C11orf88-202ENST00000375618 SMRP1Q8NCR6 262 aa17.3■□□□□ 0.36
C11orf88-202ENST00000375618 OR5B17Q8NGF7 314 aa17.3■□□□□ 0.36
C11orf88-202ENST00000375618 DPP3Q9NY33 737 aa17.3■□□□□ 0.36
C11orf88-202ENST00000375618 NUB1Q9Y5A7 615 aa17.3■□□□□ 0.36
C11orf88-202ENST00000375618 TCF20Q9UGU0 1960 aaKnown RBP17.29■□□□□ 0.36
C11orf88-202ENST00000375618 ZNF233A6NK53 670 aa17.29■□□□□ 0.36
C11orf88-202ENST00000375618 TULP1O00294 542 aaPredicted RBP17.29■□□□□ 0.36
C11orf88-202ENST00000375618 SPATA31D3P0C874 917 aa17.29■□□□□ 0.36
C11orf88-202ENST00000375618 CASP4P49662 377 aa17.29■□□□□ 0.36
C11orf88-202ENST00000375618 SNRNP35Q16560 246 aaKnown RBP17.29■□□□□ 0.36
C11orf88-202ENST00000375618 AAK1Q2M2I8 961 aa17.29■□□□□ 0.36
C11orf88-202ENST00000375618 ZCWPW2Q504Y3 356 aa17.29■□□□□ 0.36
C11orf88-202ENST00000375618 VARS2Q5ST30 1063 aaKnown RBP17.29■□□□□ 0.36
C11orf88-202ENST00000375618 LILRA6Q6PI73 481 aa17.29■□□□□ 0.36
C11orf88-202ENST00000375618 SPATA31D4Q6ZUB0 917 aa17.29■□□□□ 0.36
C11orf88-202ENST00000375618 PALB2Q86YC2 1186 aa17.29■□□□□ 0.36
C11orf88-202ENST00000375618 ELOA2Q8IYF1 753 aaPredicted RBP17.29■□□□□ 0.36
C11orf88-202ENST00000375618 CASP10Q92851 521 aa17.29■□□□□ 0.36
C11orf88-202ENST00000375618 POP1Q99575 1024 aaKnown RBP17.29■□□□□ 0.36
C11orf88-202ENST00000375618 COL25A1Q9BXS0 654 aaPredicted RBP17.29■□□□□ 0.36
C11orf88-202ENST00000375618 FNIP2Q9P278 1114 aa17.29■□□□□ 0.36
C11orf88-202ENST00000375618 MTRRQ9UBK8 725 aa17.29■□□□□ 0.36
C11orf88-202ENST00000375618 SIX4Q9UIU6 781 aa17.29■□□□□ 0.36
C11orf88-202ENST00000375618 MAN1B1Q9UKM7 699 aa17.29■□□□□ 0.36
C11orf88-202ENST00000375618 SSX2IPQ9Y2D8 614 aa17.29■□□□□ 0.36
C11orf88-202ENST00000375618 TIMM13Q9Y5L4 95 aaPredicted RBP17.29■□□□□ 0.36
C11orf88-202ENST00000375618 M0QZQ0 153 aa17.28■□□□□ 0.36
C11orf88-202ENST00000375618 PDXKO00764 312 aa17.28■□□□□ 0.36
C11orf88-202ENST00000375618 TGM5O43548 720 aa17.28■□□□□ 0.36
C11orf88-202ENST00000375618 XPOTO43592 962 aaKnown RBP17.28■□□□□ 0.36
C11orf88-202ENST00000375618 TBC1D4O60343 1298 aa17.28■□□□□ 0.36
C11orf88-202ENST00000375618 KINO60870 393 aaKnown RBP17.28■□□□□ 0.36
C11orf88-202ENST00000375618 NR3C1P04150 777 aa17.28■□□□□ 0.36
C11orf88-202ENST00000375618 ADH1AP07327 375 aa17.28■□□□□ 0.36
C11orf88-202ENST00000375618 BMP6P22004 513 aa17.28■□□□□ 0.36
C11orf88-202ENST00000375618 PRCPP42785 496 aa17.28■□□□□ 0.36
C11orf88-202ENST00000375618 LILRA4P59901 499 aa17.28■□□□□ 0.36
C11orf88-202ENST00000375618 CYP24A1Q07973 514 aa17.28■□□□□ 0.36
C11orf88-202ENST00000375618 SMAD4Q13485 552 aaKnown RBP17.28■□□□□ 0.36
C11orf88-202ENST00000375618 MRPL58Q14197 206 aaKnown RBP17.28■□□□□ 0.36
C11orf88-202ENST00000375618 ISM2Q6H9L7 571 aa17.28■□□□□ 0.36
C11orf88-202ENST00000375618 GUF1Q8N442 669 aaKnown RBP17.28■□□□□ 0.36
C11orf88-202ENST00000375618 ADAMTS19Q8TE59 1207 aa17.28■□□□□ 0.36
C11orf88-202ENST00000375618 CCDC47Q96A33 483 aaKnown RBP17.28■□□□□ 0.36
C11orf88-202ENST00000375618 BORCS6Q96GS4 357 aa17.28■□□□□ 0.36
C11orf88-202ENST00000375618 GSDMAQ96QA5 445 aa17.28■□□□□ 0.36
C11orf88-202ENST00000375618 MTMR12Q9C0I1 747 aa17.28■□□□□ 0.36
C11orf88-202ENST00000375618 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.28■□□□□ 0.36
C11orf88-202ENST00000375618 CGNQ9P2M7 1197 aaKnown RBP17.28■□□□□ 0.36
C11orf88-202ENST00000375618 PCDHB8Q9UN66 801 aa17.28■□□□□ 0.36
C11orf88-202ENST00000375618 TRAF3IP3Q9Y228 551 aa17.28■□□□□ 0.36
C11orf88-202ENST00000375618 USP15Q9Y4E8 981 aaPredicted RBP17.28■□□□□ 0.36
C11orf88-202ENST00000375618 SCN1AP35498 2009 aa17.28■□□□□ 0.36
C11orf88-202ENST00000375618 SYN3O14994 580 aa17.27■□□□□ 0.36
C11orf88-202ENST00000375618 TRAPPC3O43617 180 aa17.27■□□□□ 0.36
C11orf88-202ENST00000375618 EXOC3O60645 756 aa17.27■□□□□ 0.36
C11orf88-202ENST00000375618 WEE2P0C1S8 567 aa17.27■□□□□ 0.36
C11orf88-202ENST00000375618 POLR2BP30876 1174 aaKnown RBP17.27■□□□□ 0.36
C11orf88-202ENST00000375618 PSMD6Q15008 389 aa17.27■□□□□ 0.36
C11orf88-202ENST00000375618 NT5DC4Q86YG4 428 aa17.27■□□□□ 0.36
C11orf88-202ENST00000375618 SLC9A9Q8IVB4 645 aa17.27■□□□□ 0.36
C11orf88-202ENST00000375618 TMEM174Q8WUU8 243 aa17.27■□□□□ 0.36
C11orf88-202ENST00000375618 SUSD6Q92537 303 aa17.27■□□□□ 0.36
C11orf88-202ENST00000375618 ZNF516Q92618 1163 aa17.27■□□□□ 0.36
C11orf88-202ENST00000375618 SMARCE1Q969G3 411 aa17.27■□□□□ 0.36
C11orf88-202ENST00000375618 MFSD14AQ96MC6 490 aa17.27■□□□□ 0.36
C11orf88-202ENST00000375618 KIAA1586Q9HCI6 787 aa17.27■□□□□ 0.36
C11orf88-202ENST00000375618 MAN1C1Q9NR34 630 aa17.27■□□□□ 0.36
C11orf88-202ENST00000375618 INTS13Q9NVM9 706 aa17.27■□□□□ 0.36
C11orf88-202ENST00000375618 BACE2Q9Y5Z0 518 aa17.27■□□□□ 0.36
C11orf88-202ENST00000375618 TSC2P49815 1807 aa17.26■□□□□ 0.35
C11orf88-202ENST00000375618 VCANP13611 3396 aa17.26■□□□□ 0.35
C11orf88-202ENST00000375618 FSD2A1L4K1 749 aa17.26■□□□□ 0.35
C11orf88-202ENST00000375618 GLUD1P00367 558 aa17.26■□□□□ 0.35
C11orf88-202ENST00000375618 ITGB3P05106 788 aa17.26■□□□□ 0.35
C11orf88-202ENST00000375618 CD44P16070 742 aaKnown RBP17.26■□□□□ 0.35
C11orf88-202ENST00000375618 OR1D2P34982 312 aa17.26■□□□□ 0.35
C11orf88-202ENST00000375618 PMS1P54277 932 aaKnown RBP17.26■□□□□ 0.35
C11orf88-202ENST00000375618 RARS2Q5T160 578 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms