RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 PPEF2O14830 753 aa22.72■■□□□ 1.23
MAP1LC3A-202ENST00000374837 TEX28O15482 410 aa22.72■■□□□ 1.23
MAP1LC3A-202ENST00000374837 TBX10O75333 385 aa22.72■■□□□ 1.23
MAP1LC3A-202ENST00000374837 KLRC2P26717 231 aa22.72■■□□□ 1.23
MAP1LC3A-202ENST00000374837 NDUFV1P49821 464 aa22.72■■□□□ 1.23
MAP1LC3A-202ENST00000374837 TFAMQ00059 246 aaKnown RBP22.72■■□□□ 1.23
MAP1LC3A-202ENST00000374837 SNRNP35Q16560 246 aaKnown RBP22.72■■□□□ 1.23
MAP1LC3A-202ENST00000374837 C9orf57Q5W0N0 161 aa22.72■■□□□ 1.23
MAP1LC3A-202ENST00000374837 TMEM184AQ6ZMB5 413 aa22.72■■□□□ 1.23
MAP1LC3A-202ENST00000374837 SLC9A9Q8IVB4 645 aa22.72■■□□□ 1.23
MAP1LC3A-202ENST00000374837 LNX1Q8TBB1 728 aaPredicted RBP22.72■■□□□ 1.23
MAP1LC3A-202ENST00000374837 SLC22A17Q8WUG5 538 aa22.72■■□□□ 1.23
MAP1LC3A-202ENST00000374837 PIK3R5Q8WYR1 880 aa22.72■■□□□ 1.23
MAP1LC3A-202ENST00000374837 GBP4Q96PP9 640 aa22.72■■□□□ 1.23
MAP1LC3A-202ENST00000374837 MAN1B1Q9UKM7 699 aa22.72■■□□□ 1.23
MAP1LC3A-202ENST00000374837 BARX2Q9UMQ3 279 aaPredicted RBP22.72■■□□□ 1.23
MAP1LC3A-202ENST00000374837 TRAF3IP3Q9Y228 551 aa22.72■■□□□ 1.23
MAP1LC3A-202ENST00000374837 ATG2AQ2TAZ0 1938 aa22.71■■□□□ 1.23
MAP1LC3A-202ENST00000374837 CALUO43852 315 aaPredicted RBP22.71■■□□□ 1.23
MAP1LC3A-202ENST00000374837 EXOC3O60645 756 aa22.71■■□□□ 1.23
MAP1LC3A-202ENST00000374837 TKTP29401 623 aaKnown RBP22.71■■□□□ 1.23
MAP1LC3A-202ENST00000374837 MCM4P33991 863 aa22.71■■□□□ 1.23
MAP1LC3A-202ENST00000374837 SURF1Q15526 300 aa22.71■■□□□ 1.23
MAP1LC3A-202ENST00000374837 LEXMQ3ZCV2 418 aa22.71■■□□□ 1.23
MAP1LC3A-202ENST00000374837 ISM2Q6H9L7 571 aa22.71■■□□□ 1.23
MAP1LC3A-202ENST00000374837 CACTINQ8WUQ7 758 aaKnown RBP22.71■■□□□ 1.23
MAP1LC3A-202ENST00000374837 TMEM174Q8WUU8 243 aa22.71■■□□□ 1.23
MAP1LC3A-202ENST00000374837 FAM84AQ96KN4 292 aa22.71■■□□□ 1.23
MAP1LC3A-202ENST00000374837 SUSD3Q96L08 255 aa22.71■■□□□ 1.23
MAP1LC3A-202ENST00000374837 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.71■■□□□ 1.23
MAP1LC3A-202ENST00000374837 FNIP2Q9P278 1114 aa22.71■■□□□ 1.23
MAP1LC3A-202ENST00000374837 HCFC2Q9Y5Z7 792 aa22.71■■□□□ 1.23
MAP1LC3A-202ENST00000374837 NR3C1P04150 777 aa22.7■■□□□ 1.22
MAP1LC3A-202ENST00000374837 RPL17P18621 184 aaKnown RBP22.7■■□□□ 1.22
MAP1LC3A-202ENST00000374837 PRCPP42785 496 aa22.7■■□□□ 1.22
MAP1LC3A-202ENST00000374837 CYP24A1Q07973 514 aa22.7■■□□□ 1.22
MAP1LC3A-202ENST00000374837 MYBPC2Q14324 1141 aa22.7■■□□□ 1.22
MAP1LC3A-202ENST00000374837 AAK1Q2M2I8 961 aa22.7■■□□□ 1.22
MAP1LC3A-202ENST00000374837 LMBRD2Q68DH5 695 aaPredicted RBP22.7■■□□□ 1.22
MAP1LC3A-202ENST00000374837 PPFIBP1Q86W92 1011 aa22.7■■□□□ 1.22
MAP1LC3A-202ENST00000374837 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.7■■□□□ 1.22
MAP1LC3A-202ENST00000374837 MSLNLQ96KJ4 702 aa22.7■■□□□ 1.22
MAP1LC3A-202ENST00000374837 MFSD14AQ96MC6 490 aa22.7■■□□□ 1.22
MAP1LC3A-202ENST00000374837 TRIP11Q15643 1979 aa22.7■■□□□ 1.22
MAP1LC3A-202ENST00000374837 CITO14578 2027 aa22.69■■□□□ 1.22
MAP1LC3A-202ENST00000374837 SYN3O14994 580 aa22.69■■□□□ 1.22
MAP1LC3A-202ENST00000374837 EPCAMP16422 314 aa22.69■■□□□ 1.22
MAP1LC3A-202ENST00000374837 AARSP49588 968 aaKnown RBP eCLIP22.69■■□□□ 1.22
MAP1LC3A-202ENST00000374837 KCNQ1P51787 676 aa22.69■■□□□ 1.22
MAP1LC3A-202ENST00000374837 LILRA4P59901 499 aa22.69■■□□□ 1.22
MAP1LC3A-202ENST00000374837 PSMD6Q15008 389 aa22.69■■□□□ 1.22
MAP1LC3A-202ENST00000374837 CLUL1Q15846 466 aa22.69■■□□□ 1.22
MAP1LC3A-202ENST00000374837 PSMD5Q16401 504 aa22.69■■□□□ 1.22
MAP1LC3A-202ENST00000374837 CAMK4Q16566 473 aa22.69■■□□□ 1.22
MAP1LC3A-202ENST00000374837 COBLL1Q53SF7 1204 aa22.69■■□□□ 1.22
MAP1LC3A-202ENST00000374837 CASP10Q92851 521 aa22.69■■□□□ 1.22
MAP1LC3A-202ENST00000374837 CLSTN3Q9BQT9 956 aa22.69■■□□□ 1.22
MAP1LC3A-202ENST00000374837 GTPBP4Q9BZE4 634 aaKnown RBP22.69■■□□□ 1.22
MAP1LC3A-202ENST00000374837 INTS13Q9NVM9 706 aa22.69■■□□□ 1.22
MAP1LC3A-202ENST00000374837 PTPRJQ12913 1337 aa22.68■■□□□ 1.22
MAP1LC3A-202ENST00000374837 M0QZQ0 153 aa22.68■■□□□ 1.22
MAP1LC3A-202ENST00000374837 SPTLC1O15269 473 aa22.68■■□□□ 1.22
MAP1LC3A-202ENST00000374837 ADH1AP07327 375 aa22.68■■□□□ 1.22
MAP1LC3A-202ENST00000374837 CASP4P49662 377 aa22.68■■□□□ 1.22
MAP1LC3A-202ENST00000374837 CLCN4P51793 760 aa22.68■■□□□ 1.22
MAP1LC3A-202ENST00000374837 CREMQ03060 361 aa22.68■■□□□ 1.22
MAP1LC3A-202ENST00000374837 NFIL3Q16649 462 aa22.68■■□□□ 1.22
MAP1LC3A-202ENST00000374837 ZCWPW2Q504Y3 356 aa22.68■■□□□ 1.22
MAP1LC3A-202ENST00000374837 SCARA3Q6AZY7 606 aa22.68■■□□□ 1.22
MAP1LC3A-202ENST00000374837 ANKRD54Q6NXT1 300 aa22.68■■□□□ 1.22
MAP1LC3A-202ENST00000374837 PDXDC1Q6P996 788 aa22.68■■□□□ 1.22
MAP1LC3A-202ENST00000374837 GLYCTKQ8IVS8 523 aa22.68■■□□□ 1.22
MAP1LC3A-202ENST00000374837 C1orf127Q8N9H9 656 aa22.68■■□□□ 1.22
MAP1LC3A-202ENST00000374837 OR5B17Q8NGF7 314 aa22.68■■□□□ 1.22
MAP1LC3A-202ENST00000374837 CCDC127Q96BQ5 260 aa22.68■■□□□ 1.22
MAP1LC3A-202ENST00000374837 POP1Q99575 1024 aaKnown RBP22.68■■□□□ 1.22
MAP1LC3A-202ENST00000374837 PCDHB8Q9UN66 801 aa22.68■■□□□ 1.22
MAP1LC3A-202ENST00000374837 TCF20Q9UGU0 1960 aaKnown RBP22.68■■□□□ 1.22
MAP1LC3A-202ENST00000374837 TMEM191BP0C7N4 346 aa22.67■■□□□ 1.22
MAP1LC3A-202ENST00000374837 SRGAP2BP0DMP2 458 aa22.67■■□□□ 1.22
MAP1LC3A-202ENST00000374837 DLATP10515 647 aaKnown RBP22.67■■□□□ 1.22
MAP1LC3A-202ENST00000374837 VARS2Q5ST30 1063 aaKnown RBP22.67■■□□□ 1.22
MAP1LC3A-202ENST00000374837 DSTYKQ6XUX3 929 aa22.67■■□□□ 1.22
MAP1LC3A-202ENST00000374837 PALB2Q86YC2 1186 aa22.67■■□□□ 1.22
MAP1LC3A-202ENST00000374837 ADSSL1Q8N142 457 aa22.67■■□□□ 1.22
MAP1LC3A-202ENST00000374837 CSGALNACT2Q8N6G5 542 aa22.67■■□□□ 1.22
MAP1LC3A-202ENST00000374837 CXorf38Q8TB03 319 aa22.67■■□□□ 1.22
MAP1LC3A-202ENST00000374837 ANKRD36BP1Q96IX9 119 aa22.67■■□□□ 1.22
MAP1LC3A-202ENST00000374837 FNBP1Q96RU3 617 aa22.67■■□□□ 1.22
MAP1LC3A-202ENST00000374837 MTMR12Q9C0I1 747 aa22.67■■□□□ 1.22
MAP1LC3A-202ENST00000374837 GZF1Q9H116 711 aaPredicted RBP22.67■■□□□ 1.22
MAP1LC3A-202ENST00000374837 MTRRQ9UBK8 725 aa22.67■■□□□ 1.22
MAP1LC3A-202ENST00000374837 CD207Q9UJ71 328 aa22.67■■□□□ 1.22
MAP1LC3A-202ENST00000374837 AGAP1Q9UPQ3 857 aa22.67■■□□□ 1.22
MAP1LC3A-202ENST00000374837 BIN1O00499 593 aa22.66■■□□□ 1.22
MAP1LC3A-202ENST00000374837 ADAM12O43184 909 aa22.66■■□□□ 1.22
MAP1LC3A-202ENST00000374837 ITGB3P05106 788 aa22.66■■□□□ 1.22
MAP1LC3A-202ENST00000374837 BMP1P13497 986 aa22.66■■□□□ 1.22
MAP1LC3A-202ENST00000374837 BMP6P22004 513 aa22.66■■□□□ 1.22
MAP1LC3A-202ENST00000374837 PAX3P23760 479 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms