RNA–Protein interactions for RNA: ENST00000372890.5

TRUB2-201, Transcript of TruB pseudouridine synthase family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB2, Length 5,719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2-201ENST00000372890 RCN1Q15293 331 aa12.65□□□□□ -0.38
TRUB2-201ENST00000372890 RIN3Q8TB24 985 aa12.65□□□□□ -0.38
TRUB2-201ENST00000372890 KRCC1Q9NPI7 259 aaPredicted RBP12.65□□□□□ -0.38
TRUB2-201ENST00000372890 ZNF804BA4D1E1 1349 aa12.65□□□□□ -0.38
TRUB2-201ENST00000372890 USP17L3A6NCW0 530 aa12.65□□□□□ -0.38
TRUB2-201ENST00000372890 USP17L4A6NCW7 530 aa12.65□□□□□ -0.38
TRUB2-201ENST00000372890 A1BGP04217 495 aa12.65□□□□□ -0.38
TRUB2-201ENST00000372890 BTDP43251 543 aa12.65□□□□□ -0.38
TRUB2-201ENST00000372890 ARSEP51690 589 aa12.65□□□□□ -0.38
TRUB2-201ENST00000372890 CYP4A22Q5TCH4 519 aa12.65□□□□□ -0.38
TRUB2-201ENST00000372890 USP17L1Q7RTZ2 530 aa12.65□□□□□ -0.38
TRUB2-201ENST00000372890 OR8H2Q8N162 312 aa12.65□□□□□ -0.38
TRUB2-201ENST00000372890 KRT78Q8N1N4 520 aa12.65□□□□□ -0.38
TRUB2-201ENST00000372890 ZNF513Q8N8E2 541 aaPredicted RBP12.65□□□□□ -0.38
TRUB2-201ENST00000372890 RNPC3Q96LT9 517 aaKnown RBP12.65□□□□□ -0.38
TRUB2-201ENST00000372890 FOPNLQ96NB1 174 aa12.65□□□□□ -0.38
TRUB2-201ENST00000372890 MSTO1Q9BUK6 570 aa12.65□□□□□ -0.38
TRUB2-201ENST00000372890 ADCY10Q96PN6 1610 aa12.65□□□□□ -0.39
TRUB2-201ENST00000372890 PHF2O75151 1096 aa12.65□□□□□ -0.39
TRUB2-201ENST00000372890 GFPT1Q06210 699 aaPredicted RBP12.65□□□□□ -0.39
TRUB2-201ENST00000372890 EFHC2Q5JST6 749 aa12.65□□□□□ -0.39
TRUB2-201ENST00000372890 TRIQKQ629K1 86 aa12.65□□□□□ -0.39
TRUB2-201ENST00000372890 DDX17Q92841 729 aaKnown RBP12.65□□□□□ -0.39
TRUB2-201ENST00000372890 RNF25Q96BH1 459 aaPredicted RBP12.65□□□□□ -0.39
TRUB2-201ENST00000372890 USP44Q9H0E7 712 aa12.65□□□□□ -0.39
TRUB2-201ENST00000372890 IPPQ9Y573 584 aa12.65□□□□□ -0.39
TRUB2-201ENST00000372890 KBTBD13C9JR72 458 aa12.64□□□□□ -0.39
TRUB2-201ENST00000372890 PSTPIP1O43586 416 aa12.64□□□□□ -0.39
TRUB2-201ENST00000372890 PSAPP07602 524 aa12.64□□□□□ -0.39
TRUB2-201ENST00000372890 MYL2P10916 166 aa12.64□□□□□ -0.39
TRUB2-201ENST00000372890 TNFAIP2Q03169 654 aa12.64□□□□□ -0.39
TRUB2-201ENST00000372890 C1DQ13901 141 aaKnown RBP12.64□□□□□ -0.39
TRUB2-201ENST00000372890 ZNF544Q6NX49 715 aa12.64□□□□□ -0.39
TRUB2-201ENST00000372890 C4orf22Q6V702 233 aa12.64□□□□□ -0.39
TRUB2-201ENST00000372890 PRPF39Q86UA1 669 aaKnown RBP12.64□□□□□ -0.39
TRUB2-201ENST00000372890 XXYLT1Q8NBI6 393 aa12.64□□□□□ -0.39
TRUB2-201ENST00000372890 FAR2Q96K12 515 aa12.64□□□□□ -0.39
TRUB2-201ENST00000372890 HIST1H2AGP0C0S8 130 aaPredicted RBP12.64□□□□□ -0.39
TRUB2-201ENST00000372890 HIST1H2ADP20671 130 aa12.64□□□□□ -0.39
TRUB2-201ENST00000372890 NNMTP40261 264 aa12.64□□□□□ -0.39
TRUB2-201ENST00000372890 RPS6P62753 249 aaKnown RBP12.64□□□□□ -0.39
TRUB2-201ENST00000372890 USP39Q53GS9 565 aaKnown RBP12.64□□□□□ -0.39
TRUB2-201ENST00000372890 NANOGNBQ7Z5D8 188 aa12.64□□□□□ -0.39
TRUB2-201ENST00000372890 KRT77Q7Z794 578 aa12.64□□□□□ -0.39
TRUB2-201ENST00000372890 STKLD1Q8NE28 680 aa12.64□□□□□ -0.39
TRUB2-201ENST00000372890 HIST1H2AHQ96KK5 128 aa12.64□□□□□ -0.39
TRUB2-201ENST00000372890 SPATA17Q96L03 361 aa12.64□□□□□ -0.39
TRUB2-201ENST00000372890 HIST1H2AJQ99878 128 aa12.64□□□□□ -0.39
TRUB2-201ENST00000372890 H2AFJQ9BTM1 129 aa12.64□□□□□ -0.39
TRUB2-201ENST00000372890 ZNF341Q9BYN7 854 aa12.64□□□□□ -0.39
TRUB2-201ENST00000372890 VCPKMTQ9H867 229 aa12.64□□□□□ -0.39
TRUB2-201ENST00000372890 CAND2O75155 1236 aa12.64□□□□□ -0.39
TRUB2-201ENST00000372890 MFN2O95140 757 aa12.64□□□□□ -0.39
TRUB2-201ENST00000372890 LIFRP42702 1097 aa12.64□□□□□ -0.39
TRUB2-201ENST00000372890 LRRC47Q8N1G4 583 aaKnown RBP12.64□□□□□ -0.39
TRUB2-201ENST00000372890 THEM5Q8N1Q8 247 aa12.64□□□□□ -0.39
TRUB2-201ENST00000372890 SVOPQ8N4V2 548 aa12.64□□□□□ -0.39
TRUB2-201ENST00000372890 OR6P1Q8NGX9 317 aa12.64□□□□□ -0.39
TRUB2-201ENST00000372890 CERKQ8TCT0 537 aa12.64□□□□□ -0.39
TRUB2-201ENST00000372890 SH3KBP1Q96B97 665 aa12.64□□□□□ -0.39
TRUB2-201ENST00000372890 KLHL4Q9C0H6 718 aa12.64□□□□□ -0.39
TRUB2-201ENST00000372890 MCM8Q9UJA3 840 aa12.64□□□□□ -0.39
TRUB2-201ENST00000372890 PUDPQ08623 228 aa12.64□□□□□ -0.39
TRUB2-201ENST00000372890 TMED8Q6PL24 325 aaPredicted RBP12.64□□□□□ -0.39
TRUB2-201ENST00000372890 FAM9CQ8IZT9 166 aa12.64□□□□□ -0.39
TRUB2-201ENST00000372890 ATP10DQ9P241 1426 aa12.64□□□□□ -0.39
TRUB2-201ENST00000372890 AFF2P51816 1311 aa12.64□□□□□ -0.39
TRUB2-201ENST00000372890 H2AFYO75367 372 aaKnown RBP12.63□□□□□ -0.39
TRUB2-201ENST00000372890 SNRPAP09012 282 aaKnown RBP12.63□□□□□ -0.39
TRUB2-201ENST00000372890 THRAP10827 490 aa12.63□□□□□ -0.39
TRUB2-201ENST00000372890 FGFR4P22455 802 aa12.63□□□□□ -0.39
TRUB2-201ENST00000372890 AKAP5P24588 427 aa12.63□□□□□ -0.39
TRUB2-201ENST00000372890 SPRP35270 261 aaPredicted RBP12.63□□□□□ -0.39
TRUB2-201ENST00000372890 ZNF200P98182 395 aaPredicted RBP12.63□□□□□ -0.39
TRUB2-201ENST00000372890 TAF2Q6P1X5 1199 aa12.63□□□□□ -0.39
TRUB2-201ENST00000372890 KDM7AQ6ZMT4 941 aa12.63□□□□□ -0.39
TRUB2-201ENST00000372890 EAF2Q96CJ1 260 aaPredicted RBP12.63□□□□□ -0.39
TRUB2-201ENST00000372890 SERHL2Q9H4I8 314 aa12.63□□□□□ -0.39
TRUB2-201ENST00000372890 SERHLQ9NQF3 203 aa12.63□□□□□ -0.39
TRUB2-201ENST00000372890 FARP1Q9Y4F1 1045 aaPredicted RBP12.63□□□□□ -0.39
TRUB2-201ENST00000372890 MLH3Q9UHC1 1453 aa12.63□□□□□ -0.39
TRUB2-201ENST00000372890 K7ERI5 159 aa12.63□□□□□ -0.39
TRUB2-201ENST00000372890 TAF4O00268 1085 aa12.63□□□□□ -0.39
TRUB2-201ENST00000372890 TNPO2O14787 897 aaKnown RBP12.63□□□□□ -0.39
TRUB2-201ENST00000372890 LTKP29376 864 aa12.63□□□□□ -0.39
TRUB2-201ENST00000372890 COX10Q12887 443 aa12.63□□□□□ -0.39
TRUB2-201ENST00000372890 PTPN21Q16825 1174 aa12.63□□□□□ -0.39
TRUB2-201ENST00000372890 RCOR2Q8IZ40 523 aa12.63□□□□□ -0.39
TRUB2-201ENST00000372890 GTF3C2Q8WUA4 911 aaPredicted RBP12.63□□□□□ -0.39
TRUB2-201ENST00000372890 LRRC1Q9BTT6 524 aa12.63□□□□□ -0.39
TRUB2-201ENST00000372890 UBXN6Q9BZV1 441 aa12.63□□□□□ -0.39
TRUB2-201ENST00000372890 SARS2Q9NP81 518 aaKnown RBP12.63□□□□□ -0.39
TRUB2-201ENST00000372890 SMARCAL1Q9NZC9 954 aa12.63□□□□□ -0.39
TRUB2-201ENST00000372890 MYL3P08590 195 aa12.63□□□□□ -0.39
TRUB2-201ENST00000372890 RAD23AP54725 363 aa12.63□□□□□ -0.39
TRUB2-201ENST00000372890 RAD51Q06609 339 aa12.63□□□□□ -0.39
TRUB2-201ENST00000372890 PPIDQ08752 370 aaKnown RBP12.63□□□□□ -0.39
TRUB2-201ENST00000372890 P3H1Q32P28 736 aa12.63□□□□□ -0.39
TRUB2-201ENST00000372890 OLFML1Q6UWY5 402 aa12.63□□□□□ -0.39
TRUB2-201ENST00000372890 CD248Q9HCU0 757 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms