RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 EXOC3O60645 756 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 OR6B1O95007 311 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 GNA14O95837 355 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 FESP07332 822 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 PCP11498 1178 aaKnown RBP5.76□□□□□ -1.49
ATG4A-204ENST00000372246 KCNA3P22001 575 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 CHRNA3P32297 505 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 POLGP54098 1239 aaPredicted RBP5.76□□□□□ -1.49
ATG4A-204ENST00000372246 RWDD2BP57060 319 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 MYL7Q01449 175 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 CCDC6Q16204 474 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 EDRF1Q3B7T1 1238 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 ZNF568Q3ZCX4 644 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 C10orf76Q5T2E6 689 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 SEL1L2Q5TEA6 688 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 C16orf86Q6ZW13 317 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 OTOAQ7RTW8 1153 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 PASD1Q8IV76 773 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 SCYL3Q8IZE3 742 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 NME8Q8N427 588 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 B4GALNT2Q8NHY0 566 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 ZNF564Q8TBZ8 553 aaPredicted RBP5.76□□□□□ -1.49
ATG4A-204ENST00000372246 CCHCR1Q8TD31 782 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 LRRN4Q8WUT4 740 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 POMGNT1Q8WZA1 660 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 SEMA4DQ92854 862 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 ZNF653Q96CK0 615 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 ZNF333Q96JL9 665 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 IFT74Q96LB3 600 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 KIFC3Q9BVG8 833 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 STK33Q9BYT3 514 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 ANO3Q9BYT9 981 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 SLC6A16Q9GZN6 736 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 NKIRAS1Q9NYS0 192 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 WDR35Q9P2L0 1181 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 SLC17A7Q9P2U7 560 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 ANAPC5Q9UJX4 755 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 DNM3Q9UQ16 869 aa5.76□□□□□ -1.49
ATG4A-204ENST00000372246 BZW2Q9Y6E2 419 aaKnown RBP5.76□□□□□ -1.49
ATG4A-204ENST00000372246 DLEC1Q9Y238 1755 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 GPR75-ASB3A0A0A6YYF3 556 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 A0A0A6YYK5 440 aaPredicted RBP5.75□□□□□ -1.49
ATG4A-204ENST00000372246 MYOCOSA0A1B0GUC4 107 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 ANKRD62A6NC57 917 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 A6NJR5 290 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 SIGLEC16A6NMB1 481 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 E5RJQ4 531 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 NVLO15381 856 aaKnown RBP5.75□□□□□ -1.49
ATG4A-204ENST00000372246 TBCAO75347 108 aaKnown RBP5.75□□□□□ -1.49
ATG4A-204ENST00000372246 RTN3O95197 1032 aaPredicted RBP5.75□□□□□ -1.49
ATG4A-204ENST00000372246 KRT15P19012 456 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 LMNB1P20700 586 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 CA4P22748 312 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 GBP1P32455 592 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 CLK2P49760 499 aaKnown RBP5.75□□□□□ -1.49
ATG4A-204ENST00000372246 CACNA2D1P54289 1103 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 SOX10P56693 466 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 ARHGAP4P98171 946 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 KLC1Q07866 573 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 TMEM62Q0P6H9 643 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 IKQ13123 557 aaPredicted RBP5.75□□□□□ -1.49
ATG4A-204ENST00000372246 ALCAMQ13740 583 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 PLA2G2CQ5R387 149 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 RINT1Q6NUQ1 792 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 ILDR2Q71H61 639 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 LINC00116Q8NCU8 138 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 HIPK4Q8NE63 616 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 LMO3Q8TAP4 145 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 ARAP2Q8WZ64 1704 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 EZH1Q92800 747 aaPredicted RBP5.75□□□□□ -1.49
ATG4A-204ENST00000372246 KIFAP3Q92845 792 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 FAM136AQ96C01 138 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 TUBGCP5Q96RT8 1024 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 SHANK3Q9BYB0 1731 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 SHCBP1LQ9BZQ2 653 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 LRMDAQ9H2I8 198 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 TMEM165Q9HC07 324 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 KIAA1586Q9HCI6 787 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 SAYSD1Q9NPB0 183 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 APEX2Q9UBZ4 518 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 PCYOX1Q9UHG3 505 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 CNOT7Q9UIV1 285 aaKnown RBP5.75□□□□□ -1.49
ATG4A-204ENST00000372246 PACSIN3Q9UKS6 424 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 ASB3Q9Y575 518 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 PAPPAQ13219 1627 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 PASKQ96RG2 1323 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 PITPNM2Q9BZ72 1349 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 MEI4A8MW99 385 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 PDXKO00764 312 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 MEIS2O14770 477 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 MSH4O15457 936 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 HOXA2O43364 376 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 CALUO43852 315 aaPredicted RBP5.75□□□□□ -1.49
ATG4A-204ENST00000372246 TTLL1O95922 423 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 KITP10721 976 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 RALAP11233 206 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 SERPINB3P29508 390 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 INHBCP55103 352 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 RHBDL3P58872 404 aa5.75□□□□□ -1.49
ATG4A-204ENST00000372246 ZNF543Q08ER8 600 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms