RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 KYNUQ16719 465 aa25.14■■□□□ 1.61
RAPGEF1-203ENST00000372195 LVRNQ6Q4G3 990 aa25.14■■□□□ 1.61
RAPGEF1-203ENST00000372195 DPYSL4O14531 572 aa25.13■■□□□ 1.61
RAPGEF1-203ENST00000372195 ANGPT2O15123 496 aa25.13■■□□□ 1.61
RAPGEF1-203ENST00000372195 SERPIND1P05546 499 aa25.13■■□□□ 1.61
RAPGEF1-203ENST00000372195 USP10Q14694 798 aaKnown RBP25.13■■□□□ 1.61
RAPGEF1-203ENST00000372195 NAB2Q15742 525 aa25.13■■□□□ 1.61
RAPGEF1-203ENST00000372195 C3orf62Q6ZUJ4 267 aa25.13■■□□□ 1.61
RAPGEF1-203ENST00000372195 SPATA2LQ8IUW3 424 aaPredicted RBP25.13■■□□□ 1.61
RAPGEF1-203ENST00000372195 B4GALNT2Q8NHY0 566 aa25.13■■□□□ 1.61
RAPGEF1-203ENST00000372195 CHCHD3Q9NX63 227 aaKnown RBP25.13■■□□□ 1.61
RAPGEF1-203ENST00000372195 ZNF200P98182 395 aaPredicted RBP25.13■■□□□ 1.61
RAPGEF1-203ENST00000372195 IL31Q6EBC2 164 aa25.13■■□□□ 1.61
RAPGEF1-203ENST00000372195 IFNEQ86WN2 208 aa25.13■■□□□ 1.61
RAPGEF1-203ENST00000372195 TET3O43151 1660 aa25.13■■□□□ 1.61
RAPGEF1-203ENST00000372195 UBTFL6P0CB48 400 aaPredicted RBP25.13■■□□□ 1.61
RAPGEF1-203ENST00000372195 ZFYVE19Q96K21 471 aa25.13■■□□□ 1.61
RAPGEF1-203ENST00000372195 PSMC3IPQ9P2W1 217 aaPredicted RBP25.13■■□□□ 1.61
RAPGEF1-203ENST00000372195 ABCC3O15438 1527 aa25.13■■□□□ 1.61
RAPGEF1-203ENST00000372195 TMEM120BA0PK00 339 aa25.13■■□□□ 1.61
RAPGEF1-203ENST00000372195 APPL2Q8NEU8 664 aa25.13■■□□□ 1.61
RAPGEF1-203ENST00000372195 SHCBP1LQ9BZQ2 653 aa25.13■■□□□ 1.61
RAPGEF1-203ENST00000372195 TJP2Q9UDY2 1190 aa25.13■■□□□ 1.61
RAPGEF1-203ENST00000372195 CDC42BPBQ9Y5S2 1711 aa25.13■■□□□ 1.61
RAPGEF1-203ENST00000372195 RARBP10826 455 aa25.12■■□□□ 1.61
RAPGEF1-203ENST00000372195 OLFML2BQ68BL8 750 aa25.12■■□□□ 1.61
RAPGEF1-203ENST00000372195 LRIG3Q6UXM1 1119 aa25.12■■□□□ 1.61
RAPGEF1-203ENST00000372195 ARMC2Q8NEN0 867 aa25.12■■□□□ 1.61
RAPGEF1-203ENST00000372195 LSP1P33241 339 aa25.12■■□□□ 1.61
RAPGEF1-203ENST00000372195 MYO1GB0I1T2 1018 aa25.12■■□□□ 1.61
RAPGEF1-203ENST00000372195 ARHGEF26Q96DR7 871 aa25.12■■□□□ 1.61
RAPGEF1-203ENST00000372195 METTL5Q9NRN9 209 aaKnown RBP25.12■■□□□ 1.61
RAPGEF1-203ENST00000372195 KDM1AO60341 852 aa25.12■■□□□ 1.61
RAPGEF1-203ENST00000372195 KRT4P19013 534 aa25.12■■□□□ 1.61
RAPGEF1-203ENST00000372195 ORC1Q13415 861 aa25.12■■□□□ 1.61
RAPGEF1-203ENST00000372195 PTK2BQ14289 1009 aa25.12■■□□□ 1.61
RAPGEF1-203ENST00000372195 ZNF467Q7Z7K2 595 aaPredicted RBP25.12■■□□□ 1.61
RAPGEF1-203ENST00000372195 TBC1D16Q8TBP0 767 aa25.12■■□□□ 1.61
RAPGEF1-203ENST00000372195 C20orf96Q9NUD7 363 aaPredicted RBP25.12■■□□□ 1.61
RAPGEF1-203ENST00000372195 NDUFB10O96000 172 aa25.11■■□□□ 1.61
RAPGEF1-203ENST00000372195 SEZ6Q53EL9 994 aa25.11■■□□□ 1.61
RAPGEF1-203ENST00000372195 LRRC71Q8N4P6 559 aa25.11■■□□□ 1.61
RAPGEF1-203ENST00000372195 ITIH2P19823 946 aa25.11■■□□□ 1.61
RAPGEF1-203ENST00000372195 BRD2P25440 801 aaKnown RBP25.11■■□□□ 1.61
RAPGEF1-203ENST00000372195 LAYNQ6UX15 382 aa25.11■■□□□ 1.61
RAPGEF1-203ENST00000372195 PPP1R3GB7ZBB8 358 aa25.11■■□□□ 1.61
RAPGEF1-203ENST00000372195 DMC1Q14565 340 aa25.11■■□□□ 1.61
RAPGEF1-203ENST00000372195 MYO1DO94832 1006 aa25.11■■□□□ 1.61
RAPGEF1-203ENST00000372195 NFKBIAP25963 317 aa25.11■■□□□ 1.61
RAPGEF1-203ENST00000372195 HMOX2P30519 316 aa25.11■■□□□ 1.61
RAPGEF1-203ENST00000372195 ANKRD7Q92527 254 aa25.11■■□□□ 1.61
RAPGEF1-203ENST00000372195 PTPRN2Q92932 1015 aa25.11■■□□□ 1.61
RAPGEF1-203ENST00000372195 PALMDQ9NP74 551 aa25.11■■□□□ 1.61
RAPGEF1-203ENST00000372195 DDX28Q9NUL7 540 aaKnown RBP25.11■■□□□ 1.61
RAPGEF1-203ENST00000372195 ARHGAP10A1A4S6 786 aa25.1■■□□□ 1.61
RAPGEF1-203ENST00000372195 EEF2KO00418 725 aaKnown RBP25.1■■□□□ 1.61
RAPGEF1-203ENST00000372195 KCNA3P22001 575 aa25.1■■□□□ 1.61
RAPGEF1-203ENST00000372195 KLRC1P26715 233 aa25.1■■□□□ 1.61
RAPGEF1-203ENST00000372195 TMEM132DQ14C87 1099 aa25.1■■□□□ 1.61
RAPGEF1-203ENST00000372195 C2CD6Q53TS8 623 aa25.1■■□□□ 1.61
RAPGEF1-203ENST00000372195 BTNL9Q6UXG8 535 aa25.1■■□□□ 1.61
RAPGEF1-203ENST00000372195 MTA3Q9BTC8 594 aa25.1■■□□□ 1.61
RAPGEF1-203ENST00000372195 KCNA4P22459 653 aa25.1■■□□□ 1.61
RAPGEF1-203ENST00000372195 MAGEA4P43358 317 aa25.1■■□□□ 1.61
RAPGEF1-203ENST00000372195 NT5C2P49902 561 aa25.1■■□□□ 1.61
RAPGEF1-203ENST00000372195 RNF181Q9P0P0 153 aa25.1■■□□□ 1.61
RAPGEF1-203ENST00000372195 GTF2H1P32780 548 aa25.1■■□□□ 1.61
RAPGEF1-203ENST00000372195 ETFBP38117 255 aa25.1■■□□□ 1.61
RAPGEF1-203ENST00000372195 RPS6P62753 249 aaKnown RBP25.1■■□□□ 1.61
RAPGEF1-203ENST00000372195 FASTKD5Q7L8L6 764 aaKnown RBP25.1■■□□□ 1.61
RAPGEF1-203ENST00000372195 FAM71DQ8N9W8 422 aa25.1■■□□□ 1.61
RAPGEF1-203ENST00000372195 EPAS1Q99814 870 aa25.1■■□□□ 1.61
RAPGEF1-203ENST00000372195 CD248Q9HCU0 757 aa25.1■■□□□ 1.61
RAPGEF1-203ENST00000372195 PRPF39Q86UA1 669 aaKnown RBP25.1■■□□□ 1.61
RAPGEF1-203ENST00000372195 TEKT4Q8WW24 435 aa25.1■■□□□ 1.61
RAPGEF1-203ENST00000372195 PABPC5Q96DU9 382 aaKnown RBP25.1■■□□□ 1.61
RAPGEF1-203ENST00000372195 ARHGEF38Q9NXL2 777 aa25.1■■□□□ 1.61
RAPGEF1-203ENST00000372195 FAM47DPA6NHR8 397 aa25.1■■□□□ 1.61
RAPGEF1-203ENST00000372195 RALAP11233 206 aa25.1■■□□□ 1.61
RAPGEF1-203ENST00000372195 VCAM1P19320 739 aa25.1■■□□□ 1.61
RAPGEF1-203ENST00000372195 NNMTP40261 264 aa25.1■■□□□ 1.61
RAPGEF1-203ENST00000372195 CDC42EP5Q6NZY7 148 aa25.1■■□□□ 1.61
RAPGEF1-203ENST00000372195 SP8Q8IXZ3 490 aa25.1■■□□□ 1.61
RAPGEF1-203ENST00000372195 EMC2Q15006 297 aa25.09■■□□□ 1.61
RAPGEF1-203ENST00000372195 SYDE1Q6ZW31 735 aaPredicted RBP25.09■■□□□ 1.61
RAPGEF1-203ENST00000372195 TRPM8Q7Z2W7 1104 aa25.09■■□□□ 1.61
RAPGEF1-203ENST00000372195 APOBEC3FQ8IUX4 373 aaKnown RBP25.09■■□□□ 1.61
RAPGEF1-203ENST00000372195 MTBPQ96DY7 904 aa25.09■■□□□ 1.61
RAPGEF1-203ENST00000372195 ALKQ9UM73 1620 aa25.09■■□□□ 1.61
RAPGEF1-203ENST00000372195 PDHBP11177 359 aa25.09■■□□□ 1.61
RAPGEF1-203ENST00000372195 HSD17B4P51659 736 aa25.09■■□□□ 1.61
RAPGEF1-203ENST00000372195 ASCC2Q9H1I8 757 aaPredicted RBP25.09■■□□□ 1.61
RAPGEF1-203ENST00000372195 AVPR1AP37288 418 aa25.09■■□□□ 1.61
RAPGEF1-203ENST00000372195 AP3M2P53677 418 aa25.09■■□□□ 1.61
RAPGEF1-203ENST00000372195 TMED8Q6PL24 325 aaPredicted RBP25.09■■□□□ 1.61
RAPGEF1-203ENST00000372195 C3orf70A6NLC5 250 aaPredicted RBP25.09■■□□□ 1.61
RAPGEF1-203ENST00000372195 SUPT3HB4E1H0 165 aa25.09■■□□□ 1.61
RAPGEF1-203ENST00000372195 BTKQ06187 659 aa25.09■■□□□ 1.61
RAPGEF1-203ENST00000372195 ATPAF2Q8N5M1 289 aa25.09■■□□□ 1.61
RAPGEF1-203ENST00000372195 ZNF560Q96MR9 790 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms