RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 MRPL47Q9HD33 250 aaKnown RBP30.83■■■□□ 2.53
SSBP3-204ENST00000371320 SNX1Q13596 522 aa30.82■■■□□ 2.52
SSBP3-204ENST00000371320 SLMAPQ14BN4 828 aa30.82■■■□□ 2.52
SSBP3-204ENST00000371320 B4GALNT4Q76KP1 1039 aa30.82■■■□□ 2.52
SSBP3-204ENST00000371320 ZBTB33Q86T24 672 aa30.82■■■□□ 2.52
SSBP3-204ENST00000371320 DDX27Q96GQ7 796 aaKnown RBP30.82■■■□□ 2.52
SSBP3-204ENST00000371320 MRPL4Q9BYD3 311 aaKnown RBP30.82■■■□□ 2.52
SSBP3-204ENST00000371320 SEMA4AQ9H3S1 761 aa30.82■■■□□ 2.52
SSBP3-204ENST00000371320 CAND2O75155 1236 aa30.82■■■□□ 2.52
SSBP3-204ENST00000371320 AP3M2P53677 418 aa30.82■■■□□ 2.52
SSBP3-204ENST00000371320 SEC24CP53992 1094 aa30.82■■■□□ 2.52
SSBP3-204ENST00000371320 CALCOCO2Q13137 446 aa30.82■■■□□ 2.52
SSBP3-204ENST00000371320 SLC29A2Q14542 456 aa30.82■■■□□ 2.52
SSBP3-204ENST00000371320 IER5Q5VY09 327 aa30.82■■■□□ 2.52
SSBP3-204ENST00000371320 NLRP14Q86W24 1093 aa30.82■■■□□ 2.52
SSBP3-204ENST00000371320 PHF13Q86YI8 300 aaPredicted RBP30.82■■■□□ 2.52
SSBP3-204ENST00000371320 PPME1Q9Y570 386 aa30.82■■■□□ 2.52
SSBP3-204ENST00000371320 TOM1L1O75674 476 aa30.81■■■□□ 2.52
SSBP3-204ENST00000371320 TNFSF9P41273 254 aa30.81■■■□□ 2.52
SSBP3-204ENST00000371320 MAMLD1Q13495 774 aa30.81■■■□□ 2.52
SSBP3-204ENST00000371320 PPP1R2P3Q6NXS1 205 aa30.81■■■□□ 2.52
SSBP3-204ENST00000371320 TLCD1Q96CP7 247 aa30.81■■■□□ 2.52
SSBP3-204ENST00000371320 FAM169AQ9Y6X4 670 aa30.81■■■□□ 2.52
SSBP3-204ENST00000371320 POLR2AP24928 1970 aaKnown RBP30.81■■■□□ 2.52
SSBP3-204ENST00000371320 MSCO60682 206 aa30.8■■■□□ 2.52
SSBP3-204ENST00000371320 MARK3P27448 753 aa30.8■■■□□ 2.52
SSBP3-204ENST00000371320 PPARDQ03181 441 aa30.8■■■□□ 2.52
SSBP3-204ENST00000371320 KRT17Q04695 432 aa30.8■■■□□ 2.52
SSBP3-204ENST00000371320 PTP4A2Q12974 167 aa30.8■■■□□ 2.52
SSBP3-204ENST00000371320 MMS22LQ6ZRQ5 1243 aa30.8■■■□□ 2.52
SSBP3-204ENST00000371320 WDR49Q8IV35 697 aa30.8■■■□□ 2.52
SSBP3-204ENST00000371320 GADD45GIP1Q8TAE8 222 aaPredicted RBP30.8■■■□□ 2.52
SSBP3-204ENST00000371320 CCT8L2Q96SF2 557 aa30.8■■■□□ 2.52
SSBP3-204ENST00000371320 RASSF4Q9H2L5 321 aa30.8■■■□□ 2.52
SSBP3-204ENST00000371320 PPANQ9NQ55 473 aaKnown RBP30.8■■■□□ 2.52
SSBP3-204ENST00000371320 CHST7Q9NS84 486 aa30.8■■■□□ 2.52
SSBP3-204ENST00000371320 SCINQ9Y6U3 715 aa30.8■■■□□ 2.52
SSBP3-204ENST00000371320 E7EVH7 732 aa30.8■■■□□ 2.52
SSBP3-204ENST00000371320 SRGAP2CP0DJJ0 459 aa30.8■■■□□ 2.52
SSBP3-204ENST00000371320 TMOD1P28289 359 aa30.8■■■□□ 2.52
SSBP3-204ENST00000371320 ZNF473Q8WTR7 871 aaKnown RBP30.8■■■□□ 2.52
SSBP3-204ENST00000371320 CCDC113Q9H0I3 377 aa30.8■■■□□ 2.52
SSBP3-204ENST00000371320 A0A0G2JMZ2 1700 aa30.79■■■□□ 2.52
SSBP3-204ENST00000371320 IRF6O14896 467 aa30.79■■■□□ 2.52
SSBP3-204ENST00000371320 RARGP13631 454 aa30.79■■■□□ 2.52
SSBP3-204ENST00000371320 MAN1A1P33908 653 aa30.79■■■□□ 2.52
SSBP3-204ENST00000371320 C1QBPQ07021 282 aaKnown RBP30.79■■■□□ 2.52
SSBP3-204ENST00000371320 LAMTOR4Q0VGL1 99 aa30.79■■■□□ 2.52
SSBP3-204ENST00000371320 DAB2IPQ5VWQ8 1189 aa30.79■■■□□ 2.52
SSBP3-204ENST00000371320 SCARA3Q6AZY7 606 aa30.79■■■□□ 2.52
SSBP3-204ENST00000371320 PLEKHA7Q6IQ23 1121 aa30.79■■■□□ 2.52
SSBP3-204ENST00000371320 RHOT1Q8IXI2 618 aa30.79■■■□□ 2.52
SSBP3-204ENST00000371320 MYCBPAPQ8TBZ2 947 aa30.79■■■□□ 2.52
SSBP3-204ENST00000371320 TCP11Q8WWU5 503 aa30.79■■■□□ 2.52
SSBP3-204ENST00000371320 BBXQ8WY36 941 aaPredicted RBP30.79■■■□□ 2.52
SSBP3-204ENST00000371320 ATG4AQ8WYN0 398 aa30.79■■■□□ 2.52
SSBP3-204ENST00000371320 ELP3Q9H9T3 547 aa30.79■■■□□ 2.52
SSBP3-204ENST00000371320 ADM5C9JUS6 153 aa30.78■■■□□ 2.52
SSBP3-204ENST00000371320 PSTPIP1O43586 416 aa30.78■■■□□ 2.52
SSBP3-204ENST00000371320 FAM189A1O60320 539 aa30.78■■■□□ 2.52
SSBP3-204ENST00000371320 CST3P01034 146 aaPredicted RBP30.78■■■□□ 2.52
SSBP3-204ENST00000371320 GRM1Q13255 1194 aa30.78■■■□□ 2.52
SSBP3-204ENST00000371320 BYSLQ13895 437 aaKnown RBP30.78■■■□□ 2.52
SSBP3-204ENST00000371320 CCDC50Q8IVM0 306 aa30.78■■■□□ 2.52
SSBP3-204ENST00000371320 DCPSQ96C86 337 aaKnown RBP30.78■■■□□ 2.52
SSBP3-204ENST00000371320 OTUD5Q96G74 571 aa30.78■■■□□ 2.52
SSBP3-204ENST00000371320 MPHOSPH6Q99547 160 aaKnown RBP30.78■■■□□ 2.52
SSBP3-204ENST00000371320 ACO2Q99798 780 aaKnown RBP30.78■■■□□ 2.52
SSBP3-204ENST00000371320 HERPUD2Q9BSE4 406 aa30.78■■■□□ 2.52
SSBP3-204ENST00000371320 WHRNQ9P202 907 aa30.78■■■□□ 2.52
SSBP3-204ENST00000371320 PTPRFP10586 1907 aa30.78■■■□□ 2.52
SSBP3-204ENST00000371320 A0A0G2JLL6 359 aaPredicted RBP30.78■■■□□ 2.52
SSBP3-204ENST00000371320 ASS1P00966 412 aaKnown RBP30.78■■■□□ 2.52
SSBP3-204ENST00000371320 FGFR4P22455 802 aa30.78■■■□□ 2.52
SSBP3-204ENST00000371320 DHX30Q7L2E3 1194 aaKnown RBP eCLIP30.78■■■□□ 2.522e-6■■■□□ 18.9
SSBP3-204ENST00000371320 PRRT2Q7Z6L0 340 aaPredicted RBP30.78■■■□□ 2.52
SSBP3-204ENST00000371320 ZBTB8OSQ8IWT0 167 aa30.78■■■□□ 2.52
SSBP3-204ENST00000371320 SULF1Q8IWU6 871 aa30.78■■■□□ 2.52
SSBP3-204ENST00000371320 ZNF606Q8WXB4 792 aa30.78■■■□□ 2.52
SSBP3-204ENST00000371320 FAM212AQ96EL1 285 aa30.78■■■□□ 2.52
SSBP3-204ENST00000371320 PGM2Q96G03 612 aa30.78■■■□□ 2.52
SSBP3-204ENST00000371320 ASCC2Q9H1I8 757 aaPredicted RBP30.78■■■□□ 2.52
SSBP3-204ENST00000371320 R3HDMLQ9H3Y0 253 aa30.78■■■□□ 2.52
SSBP3-204ENST00000371320 ASIC3Q9UHC3 531 aa30.78■■■□□ 2.52
SSBP3-204ENST00000371320 TLDC2A0PJX2 215 aa30.77■■■□□ 2.52
SSBP3-204ENST00000371320 ARIH2O95376 493 aa30.77■■■□□ 2.52
SSBP3-204ENST00000371320 FAM107AO95990 144 aa30.77■■■□□ 2.52
SSBP3-204ENST00000371320 MKRN4PQ13434 485 aaPredicted RBP30.77■■■□□ 2.52
SSBP3-204ENST00000371320 MXD4Q14582 209 aaPredicted RBP30.77■■■□□ 2.52
SSBP3-204ENST00000371320 CDCA2Q69YH5 1023 aaPredicted RBP30.77■■■□□ 2.52
SSBP3-204ENST00000371320 SYDE1Q6ZW31 735 aaPredicted RBP30.77■■■□□ 2.52
SSBP3-204ENST00000371320 RNF149Q8NC42 400 aa30.77■■■□□ 2.52
SSBP3-204ENST00000371320 GRK7Q8WTQ7 553 aa30.77■■■□□ 2.52
SSBP3-204ENST00000371320 GPR20Q99678 358 aa30.77■■■□□ 2.52
SSBP3-204ENST00000371320 DCLK3Q9C098 648 aa30.77■■■□□ 2.52
SSBP3-204ENST00000371320 MTMR12Q9C0I1 747 aa30.77■■■□□ 2.52
SSBP3-204ENST00000371320 NOP56O00567 594 aaKnown RBP30.77■■■□□ 2.52
SSBP3-204ENST00000371320 TLR3O15455 904 aaKnown RBP30.77■■■□□ 2.52
SSBP3-204ENST00000371320 CNMDO75829 334 aa30.77■■■□□ 2.52
SSBP3-204ENST00000371320 PRKCBP05771 671 aa30.77■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms