RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 HIST1H2AHQ96KK5 128 aa23.25■■□□□ 1.31
TM9SF3-201ENST00000371142 HIST1H2AJQ99878 128 aa23.25■■□□□ 1.31
TM9SF3-201ENST00000371142 H2AFJQ9BTM1 129 aa23.25■■□□□ 1.31
TM9SF3-201ENST00000371142 KCNH4Q9UQ05 1017 aa23.25■■□□□ 1.31
TM9SF3-201ENST00000371142 TNS3Q68CZ2 1445 aa23.25■■□□□ 1.31
TM9SF3-201ENST00000371142 CNOT7Q9UIV1 285 aaKnown RBP23.25■■□□□ 1.31
TM9SF3-201ENST00000371142 STK4Q13043 487 aa23.24■■□□□ 1.31
TM9SF3-201ENST00000371142 OR2W6PQ8NHA6 318 aa23.24■■□□□ 1.31
TM9SF3-201ENST00000371142 SEPT8Q92599 483 aa23.24■■□□□ 1.31
TM9SF3-201ENST00000371142 SCAF8Q9UPN6 1271 aaKnown RBP23.24■■□□□ 1.31
TM9SF3-201ENST00000371142 CHMP2BQ9UQN3 213 aa23.24■■□□□ 1.31
TM9SF3-201ENST00000371142 ENO3P13929 434 aaPredicted RBP23.24■■□□□ 1.31
TM9SF3-201ENST00000371142 MTM1Q13496 603 aa23.24■■□□□ 1.31
TM9SF3-201ENST00000371142 DMC1Q14565 340 aa23.24■■□□□ 1.31
TM9SF3-201ENST00000371142 EFHBQ8N7U6 833 aa23.24■■□□□ 1.31
TM9SF3-201ENST00000371142 ARL2BPQ9Y2Y0 163 aa23.24■■□□□ 1.31
TM9SF3-201ENST00000371142 STX3Q13277 289 aa23.24■■□□□ 1.31
TM9SF3-201ENST00000371142 OTUB1Q96FW1 271 aaPredicted RBP23.24■■□□□ 1.31
TM9SF3-201ENST00000371142 WDR35Q9P2L0 1181 aa23.24■■□□□ 1.31
TM9SF3-201ENST00000371142 PIGHQ14442 188 aaPredicted RBP23.24■■□□□ 1.31
TM9SF3-201ENST00000371142 LRRC36Q1X8D7 754 aa23.24■■□□□ 1.31
TM9SF3-201ENST00000371142 CDC42EP5Q6NZY7 148 aa23.24■■□□□ 1.31
TM9SF3-201ENST00000371142 PKN3Q6P5Z2 889 aa23.24■■□□□ 1.31
TM9SF3-201ENST00000371142 PLA2R1Q13018 1463 aa23.24■■□□□ 1.31
TM9SF3-201ENST00000371142 STXBP3O00186 592 aa23.24■■□□□ 1.31
TM9SF3-201ENST00000371142 RHOBTB3O94955 611 aa23.24■■□□□ 1.31
TM9SF3-201ENST00000371142 C6orf222P0C671 652 aaPredicted RBP23.24■■□□□ 1.31
TM9SF3-201ENST00000371142 PRKCEQ02156 737 aa23.24■■□□□ 1.31
TM9SF3-201ENST00000371142 C6orf10Q5SRN2 563 aa23.24■■□□□ 1.31
TM9SF3-201ENST00000371142 UBA3Q8TBC4 463 aa23.24■■□□□ 1.31
TM9SF3-201ENST00000371142 YIPF2Q9BWQ6 316 aa23.24■■□□□ 1.31
TM9SF3-201ENST00000371142 PRR12Q9ULL5 1215 aa23.24■■□□□ 1.31
TM9SF3-201ENST00000371142 PITPNM2Q9BZ72 1349 aa23.23■■□□□ 1.31
TM9SF3-201ENST00000371142 NDUFS3O75489 264 aa23.23■■□□□ 1.31
TM9SF3-201ENST00000371142 FXR1P51114 621 aaKnown RBP eCLIP23.23■■□□□ 1.31
TM9SF3-201ENST00000371142 INPP5AQ14642 412 aa23.23■■□□□ 1.31
TM9SF3-201ENST00000371142 LONP2Q86WA8 852 aa23.23■■□□□ 1.31
TM9SF3-201ENST00000371142 ARHGEF40Q8TER5 1519 aa23.23■■□□□ 1.31
TM9SF3-201ENST00000371142 SLC9A1P19634 815 aa23.23■■□□□ 1.31
TM9SF3-201ENST00000371142 SMTNL2Q2TAL5 461 aa23.23■■□□□ 1.31
TM9SF3-201ENST00000371142 ABHD8Q96I13 439 aa23.23■■□□□ 1.31
TM9SF3-201ENST00000371142 KCNF1Q9H3M0 494 aa23.23■■□□□ 1.31
TM9SF3-201ENST00000371142 KLC4Q9NSK0 619 aa23.23■■□□□ 1.31
TM9SF3-201ENST00000371142 ZNRF3Q9ULT6 936 aa23.23■■□□□ 1.31
TM9SF3-201ENST00000371142 ZBTB12Q9Y330 459 aaPredicted RBP23.23■■□□□ 1.31
TM9SF3-201ENST00000371142 hCG_2014768A0A024R1R8 64 aa23.23■■□□□ 1.31
TM9SF3-201ENST00000371142 ITIH2P19823 946 aa23.23■■□□□ 1.31
TM9SF3-201ENST00000371142 LRRC74AQ0VAA2 488 aa23.23■■□□□ 1.31
TM9SF3-201ENST00000371142 SEPT1Q8WYJ6 367 aa23.23■■□□□ 1.31
TM9SF3-201ENST00000371142 PSMC3IPQ9P2W1 217 aaPredicted RBP23.23■■□□□ 1.31
TM9SF3-201ENST00000371142 SMG5Q9UPR3 1016 aaKnown RBP23.23■■□□□ 1.31
TM9SF3-201ENST00000371142 SUPT3HO75486 399 aa23.23■■□□□ 1.31
TM9SF3-201ENST00000371142 ALDH1A1P00352 501 aa23.23■■□□□ 1.31
TM9SF3-201ENST00000371142 NLRP11P59045 1033 aaKnown RBP23.23■■□□□ 1.31
TM9SF3-201ENST00000371142 ZNF200P98182 395 aaPredicted RBP23.23■■□□□ 1.31
TM9SF3-201ENST00000371142 STILQ15468 1287 aa23.23■■□□□ 1.31
TM9SF3-201ENST00000371142 ZNF280CQ8ND82 737 aa23.23■■□□□ 1.31
TM9SF3-201ENST00000371142 C20orf96Q9NUD7 363 aaPredicted RBP23.23■■□□□ 1.31
TM9SF3-201ENST00000371142 LSM7Q9UK45 103 aaKnown RBP23.23■■□□□ 1.31
TM9SF3-201ENST00000371142 PSMD3O43242 534 aa23.22■■□□□ 1.31
TM9SF3-201ENST00000371142 PPP3CCP48454 512 aa23.22■■□□□ 1.31
TM9SF3-201ENST00000371142 BYSLQ13895 437 aaKnown RBP23.22■■□□□ 1.31
TM9SF3-201ENST00000371142 STRIP1Q5VSL9 837 aa23.22■■□□□ 1.31
TM9SF3-201ENST00000371142 SLC7A14Q8TBB6 771 aa23.22■■□□□ 1.31
TM9SF3-201ENST00000371142 PRAMEF18Q5VWM3 479 aa23.22■■□□□ 1.31
TM9SF3-201ENST00000371142 ZNF473Q8WTR7 871 aaKnown RBP23.22■■□□□ 1.31
TM9SF3-201ENST00000371142 SYNDIG1Q9H7V2 258 aa23.22■■□□□ 1.31
TM9SF3-201ENST00000371142 ARHGAP26Q9UNA1 814 aa23.22■■□□□ 1.31
TM9SF3-201ENST00000371142 GH1P01241 217 aa23.22■■□□□ 1.31
TM9SF3-201ENST00000371142 WEE2P0C1S8 567 aa23.22■■□□□ 1.31
TM9SF3-201ENST00000371142 LRRC71Q8N4P6 559 aa23.22■■□□□ 1.31
TM9SF3-201ENST00000371142 EPN3Q9H201 632 aa23.22■■□□□ 1.31
TM9SF3-201ENST00000371142 RBM12Q9NTZ6 932 aaKnown RBP23.22■■□□□ 1.31
TM9SF3-201ENST00000371142 SUPT3HB4E1H0 165 aa23.22■■□□□ 1.31
TM9SF3-201ENST00000371142 ABCE1P61221 599 aaKnown RBP23.22■■□□□ 1.31
TM9SF3-201ENST00000371142 ST8SIA6P61647 398 aa23.22■■□□□ 1.31
TM9SF3-201ENST00000371142 PI4K2AQ9BTU6 479 aa23.22■■□□□ 1.31
TM9SF3-201ENST00000371142 C5orf58C9J3I9 102 aa23.22■■□□□ 1.31
TM9SF3-201ENST00000371142 ZNF189O75820 626 aaPredicted RBP23.22■■□□□ 1.31
TM9SF3-201ENST00000371142 CYP2C19P33261 490 aa23.22■■□□□ 1.31
TM9SF3-201ENST00000371142 PTK7Q13308 1070 aa23.22■■□□□ 1.31
TM9SF3-201ENST00000371142 ABCC3O15438 1527 aa23.21■■□□□ 1.31
TM9SF3-201ENST00000371142 PHF20L1A8MW92 1017 aa23.21■■□□□ 1.31
TM9SF3-201ENST00000371142 HLA-DRAP01903 254 aa23.21■■□□□ 1.31
TM9SF3-201ENST00000371142 NR3C2P08235 984 aa23.21■■□□□ 1.31
TM9SF3-201ENST00000371142 KCNA4P22459 653 aa23.21■■□□□ 1.31
TM9SF3-201ENST00000371142 CCZ1BP86790 482 aa23.21■■□□□ 1.31
TM9SF3-201ENST00000371142 CCZ1P86791 482 aaPredicted RBP23.21■■□□□ 1.31
TM9SF3-201ENST00000371142 LATS2Q9NRM7 1088 aa23.21■■□□□ 1.31
TM9SF3-201ENST00000371142 AP3B1O00203 1094 aa23.21■■□□□ 1.31
TM9SF3-201ENST00000371142 ARIH2O95376 493 aa23.21■■□□□ 1.31
TM9SF3-201ENST00000371142 TRADDQ15628 312 aa23.21■■□□□ 1.31
TM9SF3-201ENST00000371142 E4F1Q66K89 784 aaPredicted RBP23.21■■□□□ 1.31
TM9SF3-201ENST00000371142 RUBCNQ92622 972 aa23.21■■□□□ 1.31
TM9SF3-201ENST00000371142 TMEM161AQ9NX61 479 aa23.21■■□□□ 1.31
TM9SF3-201ENST00000371142 PKP3Q9Y446 797 aa23.21■■□□□ 1.31
TM9SF3-201ENST00000371142 ADGRA2Q96PE1 1338 aa23.21■■□□□ 1.31
TM9SF3-201ENST00000371142 TSPAN17Q96FV3 270 aa23.21■■□□□ 1.31
TM9SF3-201ENST00000371142 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.21■■□□□ 1.318e-10■■■■□ 26.7
TM9SF3-201ENST00000371142 CD274Q9NZQ7 290 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms