RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 APBB1IPQ7Z5R6 666 aaPredicted RBP16.52■□□□□ 0.24
SS18L1-202ENST00000370848 CCDC105Q8IYK2 499 aa16.52■□□□□ 0.24
SS18L1-202ENST00000370848 CEP57L1Q8IYX8 460 aa16.52■□□□□ 0.24
SS18L1-202ENST00000370848 LNX1Q8TBB1 728 aaPredicted RBP16.52■□□□□ 0.24
SS18L1-202ENST00000370848 ATOH1Q92858 354 aaPredicted RBP16.52■□□□□ 0.24
SS18L1-202ENST00000370848 PAGE5Q96GU1 130 aa16.52■□□□□ 0.24
SS18L1-202ENST00000370848 B3GALT6Q96L58 329 aa16.52■□□□□ 0.24
SS18L1-202ENST00000370848 SNX27Q96L92 541 aa16.52■□□□□ 0.24
SS18L1-202ENST00000370848 ZMAT2Q96NC0 199 aaKnown RBP16.52■□□□□ 0.24
SS18L1-202ENST00000370848 MYADMQ96S97 322 aa16.52■□□□□ 0.24
SS18L1-202ENST00000370848 RTP3Q9BQQ7 232 aa16.52■□□□□ 0.24
SS18L1-202ENST00000370848 CLSTN3Q9BQT9 956 aa16.52■□□□□ 0.24
SS18L1-202ENST00000370848 CCDC94Q9BW85 323 aaPredicted RBP16.52■□□□□ 0.24
SS18L1-202ENST00000370848 OLFML3Q9NRN5 406 aa16.52■□□□□ 0.24
SS18L1-202ENST00000370848 FAM86C1Q9NVL1 165 aa16.52■□□□□ 0.24
SS18L1-202ENST00000370848 CIZ1Q9ULV3 898 aaPredicted RBP16.52■□□□□ 0.24
SS18L1-202ENST00000370848 WDR87Q6ZQQ6 2873 aa16.52■□□□□ 0.24
SS18L1-202ENST00000370848 RIF1Q5UIP0 2472 aaKnown RBP16.51■□□□□ 0.23
SS18L1-202ENST00000370848 SPDYE4A6NLX3 237 aa16.51■□□□□ 0.23
SS18L1-202ENST00000370848 FAM189A1O60320 539 aa16.51■□□□□ 0.23
SS18L1-202ENST00000370848 GFRA3O60609 400 aa16.51■□□□□ 0.23
SS18L1-202ENST00000370848 PRPF6O94906 941 aaKnown RBP16.51■□□□□ 0.23
SS18L1-202ENST00000370848 THP07101 528 aa16.51■□□□□ 0.23
SS18L1-202ENST00000370848 HNRNPA1P09651 372 aaKnown RBP eCLIP16.51■□□□□ 0.23
SS18L1-202ENST00000370848 PRR29P0C7W0 189 aa16.51■□□□□ 0.23
SS18L1-202ENST00000370848 CXCL8P10145 99 aa16.51■□□□□ 0.23
SS18L1-202ENST00000370848 SRFP11831 508 aa16.51■□□□□ 0.23
SS18L1-202ENST00000370848 LAMP2P13473 410 aa16.51■□□□□ 0.23
SS18L1-202ENST00000370848 SYKP43405 635 aa16.51■□□□□ 0.23
SS18L1-202ENST00000370848 AMPD3Q01432 767 aa16.51■□□□□ 0.23
SS18L1-202ENST00000370848 XKR4Q5GH76 650 aa16.51■□□□□ 0.23
SS18L1-202ENST00000370848 L1TD1Q5T7N2 865 aaKnown RBP16.51■□□□□ 0.23
SS18L1-202ENST00000370848 CNNM4Q6P4Q7 775 aa16.51■□□□□ 0.23
SS18L1-202ENST00000370848 ALKAL1Q6UXT8 129 aa16.51■□□□□ 0.23
SS18L1-202ENST00000370848 SLC44A3Q8N4M1 653 aa16.51■□□□□ 0.23
SS18L1-202ENST00000370848 RIN2Q8WYP3 895 aaPredicted RBP16.51■□□□□ 0.23
SS18L1-202ENST00000370848 ACAP3Q96P50 834 aa16.51■□□□□ 0.23
SS18L1-202ENST00000370848 PPP1R10Q96QC0 940 aaKnown RBP16.51■□□□□ 0.23
SS18L1-202ENST00000370848 TTPALQ9BTX7 342 aa16.51■□□□□ 0.23
SS18L1-202ENST00000370848 LRRC27Q9C0I9 530 aa16.51■□□□□ 0.23
SS18L1-202ENST00000370848 GOLGA2P5Q9HBQ8 144 aa16.51■□□□□ 0.23
SS18L1-202ENST00000370848 GVINP1Q7Z2Y8 2422 aa16.51■□□□□ 0.23
SS18L1-202ENST00000370848 A0A0B4J269 797 aa16.5■□□□□ 0.23
SS18L1-202ENST00000370848 SMIM28A0A1B0GU29 152 aa16.5■□□□□ 0.23
SS18L1-202ENST00000370848 KLRC4O43908 158 aa16.5■□□□□ 0.23
SS18L1-202ENST00000370848 TADA2AO75478 443 aa16.5■□□□□ 0.23
SS18L1-202ENST00000370848 FGFR3P22607 806 aa16.5■□□□□ 0.23
SS18L1-202ENST00000370848 ADSSP30520 456 aa16.5■□□□□ 0.23
SS18L1-202ENST00000370848 YARSP54577 528 aaKnown RBP16.5■□□□□ 0.23
SS18L1-202ENST00000370848 SOX4Q06945 474 aaPredicted RBP16.5■□□□□ 0.23
SS18L1-202ENST00000370848 SPAG1Q07617 926 aa16.5■□□□□ 0.23
SS18L1-202ENST00000370848 EHHADHQ08426 723 aa16.5■□□□□ 0.23
SS18L1-202ENST00000370848 HTR4Q13639 388 aa16.5■□□□□ 0.23
SS18L1-202ENST00000370848 SLC10A6Q3KNW5 377 aa16.5■□□□□ 0.23
SS18L1-202ENST00000370848 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.5■□□□□ 0.23
SS18L1-202ENST00000370848 UNC13DQ70J99 1090 aa16.5■□□□□ 0.23
SS18L1-202ENST00000370848 ZSWIM2Q8NEG5 633 aa16.5■□□□□ 0.23
SS18L1-202ENST00000370848 HASPINQ8TF76 798 aa16.5■□□□□ 0.23
SS18L1-202ENST00000370848 HVCN1Q96D96 273 aa16.5■□□□□ 0.23
SS18L1-202ENST00000370848 PYM1Q9BRP8 204 aaKnown RBP16.5■□□□□ 0.23
SS18L1-202ENST00000370848 MSTO1Q9BUK6 570 aa16.5■□□□□ 0.23
SS18L1-202ENST00000370848 MFSD1Q9H3U5 465 aa16.5■□□□□ 0.23
SS18L1-202ENST00000370848 SLC2A4RGQ9NR83 387 aa16.5■□□□□ 0.23
SS18L1-202ENST00000370848 DCHS1Q96JQ0 3298 aa16.5■□□□□ 0.23
SS18L1-202ENST00000370848 TCHHQ07283 1943 aa16.5■□□□□ 0.23
SS18L1-202ENST00000370848 FAM186AA6NE01 2351 aa16.5■□□□□ 0.23
SS18L1-202ENST00000370848 KRBA1A5PL33 1030 aa16.49■□□□□ 0.23
SS18L1-202ENST00000370848 PRR23AA6NEV1 266 aa16.49■□□□□ 0.23
SS18L1-202ENST00000370848 NARSO43776 548 aaKnown RBP16.49■□□□□ 0.23
SS18L1-202ENST00000370848 SCP2P22307 547 aa16.49■□□□□ 0.23
SS18L1-202ENST00000370848 HOXD13P35453 343 aa16.49■□□□□ 0.23
SS18L1-202ENST00000370848 RAB33AQ14088 237 aa16.49■□□□□ 0.23
SS18L1-202ENST00000370848 FAM26FQ5R3K3 315 aa16.49■□□□□ 0.23
SS18L1-202ENST00000370848 PHLDB3Q6NSJ2 640 aa16.49■□□□□ 0.23
SS18L1-202ENST00000370848 PRSS55Q6UWB4 352 aaPredicted RBP16.49■□□□□ 0.23
SS18L1-202ENST00000370848 CD300LGQ6UXG3 332 aa16.49■□□□□ 0.23
SS18L1-202ENST00000370848 PALB2Q86YC2 1186 aa16.49■□□□□ 0.23
SS18L1-202ENST00000370848 C18orf25Q96B23 403 aaPredicted RBP16.49■□□□□ 0.23
SS18L1-202ENST00000370848 UROC1Q96N76 676 aa16.49■□□□□ 0.23
SS18L1-202ENST00000370848 ACCSQ96QU6 501 aa16.49■□□□□ 0.23
SS18L1-202ENST00000370848 TOPORSQ9NS56 1045 aaPredicted RBP16.49■□□□□ 0.23
SS18L1-202ENST00000370848 CNTN3Q9P232 1028 aa16.49■□□□□ 0.23
SS18L1-202ENST00000370848 SPTBN4Q9H254 2564 aa16.49■□□□□ 0.23
SS18L1-202ENST00000370848 NOTCH4Q99466 2003 aa16.48■□□□□ 0.23
SS18L1-202ENST00000370848 TRIP11Q15643 1979 aa16.48■□□□□ 0.23
SS18L1-202ENST00000370848 OGTO15294 1046 aa16.48■□□□□ 0.23
SS18L1-202ENST00000370848 PI15O43692 258 aa16.48■□□□□ 0.23
SS18L1-202ENST00000370848 ZNF202O95125 648 aa16.48■□□□□ 0.23
SS18L1-202ENST00000370848 CLTAP09496 248 aa16.48■□□□□ 0.23
SS18L1-202ENST00000370848 RPL17P18621 184 aaKnown RBP16.48■□□□□ 0.23
SS18L1-202ENST00000370848 GBP2P32456 591 aaPredicted RBP16.48■□□□□ 0.23
SS18L1-202ENST00000370848 ACOT2P49753 483 aa16.48■□□□□ 0.23
SS18L1-202ENST00000370848 ENOX2Q16206 610 aaKnown RBP16.48■□□□□ 0.23
SS18L1-202ENST00000370848 PSMD5Q16401 504 aa16.48■□□□□ 0.23
SS18L1-202ENST00000370848 UVSSAQ2YD98 709 aa16.48■□□□□ 0.23
SS18L1-202ENST00000370848 KRBA2Q6ZNG9 492 aa16.48■□□□□ 0.23
SS18L1-202ENST00000370848 SIX5Q8N196 739 aa16.48■□□□□ 0.23
SS18L1-202ENST00000370848 RSAD2Q8WXG1 361 aa16.48■□□□□ 0.23
SS18L1-202ENST00000370848 SLC39A2Q9NP94 309 aa16.48■□□□□ 0.23
SS18L1-202ENST00000370848 CHMP5Q9NZZ3 219 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms