RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 DYNLL1P63167 89 aaKnown RBP4.25□□□□□ -1.73
MCF2-203ENST00000370576 TNFAIP2Q03169 654 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 EVX2Q03828 476 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 BTKQ06187 659 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 TRIM14Q14142 442 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 GRM2Q14416 872 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 PDIA5Q14554 519 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 RRP1BQ14684 758 aaKnown RBP4.25□□□□□ -1.73
MCF2-203ENST00000370576 LASP1Q14847 261 aaKnown RBP4.25□□□□□ -1.73
MCF2-203ENST00000370576 KCNT1Q5JUK3 1230 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 SFMBT2Q5VUG0 894 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 METTL11BQ5VVY1 283 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 TTBK2Q6IQ55 1244 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 NIPA1Q7RTP0 329 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 RETREG3Q86VR2 466 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 FOXP4Q8IVH2 680 aaPredicted RBP4.25□□□□□ -1.73
MCF2-203ENST00000370576 LRRC43Q8N309 656 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 SRBD1Q8N5C6 995 aaKnown RBP4.25□□□□□ -1.73
MCF2-203ENST00000370576 ZNF784Q8NCA9 323 aaPredicted RBP4.25□□□□□ -1.73
MCF2-203ENST00000370576 ARRDC4Q8NCT1 418 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 FAM13CQ8NE31 585 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 FAM151AQ8WW52 585 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 CFAP36Q96G28 342 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 GBP4Q96PP9 640 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 BCO2Q9BYV7 579 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 SCAND2PQ9GZW5 306 aaPredicted RBP4.25□□□□□ -1.73
MCF2-203ENST00000370576 EPS8L2Q9H6S3 715 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 MKNK2Q9HBH9 465 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 TM9SF3Q9HD45 589 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 MCM9Q9NXL9 1143 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 STK32BQ9NY57 414 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 TLR6Q9Y2C9 796 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 A0A0B4J269 797 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 H3BRJ5 948 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 AP3B1O00203 1094 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 PTP4A3O75365 173 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 CDKL5O76039 1030 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 MX2P20592 715 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 ALAS2P22557 587 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 PBX1P40424 430 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 BAG6P46379 1132 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 DRG2P55039 364 aaKnown RBP4.25□□□□□ -1.73
MCF2-203ENST00000370576 CLCQ05315 142 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 SPIRE1Q08AE8 756 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 KLF1Q13351 362 aaPredicted RBP4.25□□□□□ -1.73
MCF2-203ENST00000370576 ACVR2BQ13705 512 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 IL17AQ16552 155 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 Q4G0T1 1027 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 ISM2Q6H9L7 571 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 TANGO2Q6ICL3 276 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 JMJD6Q6NYC1 403 aaPredicted RBP4.25□□□□□ -1.73
MCF2-203ENST00000370576 NXPE4Q6UWF7 544 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 AGMOQ6ZNB7 445 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 KIAA1211Q6ZU35 1233 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 RFX8Q6ZV50 586 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 MRPL10Q7Z7H8 261 aaKnown RBP4.25□□□□□ -1.73
MCF2-203ENST00000370576 TRIM74Q86UV6 250 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 TRIM73Q86UV7 250 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 GAS2L3Q86XJ1 694 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 PLA2G4DQ86XP0 818 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 KIF18BQ86Y91 864 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 WDR49Q8IV35 697 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 FAM217AQ8IXS0 508 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 IGSF22Q8N9C0 903 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 EDEM1Q92611 657 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 GPKOWQ92917 476 aaPredicted RBP eCLIP4.25□□□□□ -1.73
MCF2-203ENST00000370576 CCDC138Q96M89 665 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 TCF12Q99081 682 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 TACO1Q9BSH4 297 aaKnown RBP4.25□□□□□ -1.73
MCF2-203ENST00000370576 ACPTQ9BZG2 426 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 PDE11AQ9HCR9 933 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 IFT80Q9P2H3 777 aaPredicted RBP4.25□□□□□ -1.73
MCF2-203ENST00000370576 BCS1LQ9Y276 419 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 PCDHB12Q9Y5F1 795 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 SRPRBQ9Y5M8 271 aaKnown RBP4.25□□□□□ -1.73
MCF2-203ENST00000370576 SMIM22K7EJ46 135 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 SNAP23O00161 211 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 ATXN7O15265 892 aaPredicted RBP4.24□□□□□ -1.73
MCF2-203ENST00000370576 CCP110O43303 1012 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 ACTN4O43707 911 aaKnown RBP4.24□□□□□ -1.73
MCF2-203ENST00000370576 ECE2O60344 883 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 PPP1R11O60927 126 aaPredicted RBP4.24□□□□□ -1.73
MCF2-203ENST00000370576 GUCA1CO95843 209 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 PF4P02776 101 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 SOX6P35712 828 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 NPTX2P47972 431 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 CDK8P49336 464 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 FXR2P51116 673 aaKnown RBP eCLIP4.24□□□□□ -1.73
MCF2-203ENST00000370576 PLCD1P51178 756 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 ACY1Q03154 408 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 STRN3Q13033 797 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 TBC1D25Q3MII6 688 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 KRT71Q3SY84 523 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 TMEM119Q4V9L6 283 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 ASPRV1Q53RT3 343 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 FAM209AQ5JX71 171 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 AP1ARQ63HQ0 302 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 DPY19L2P1Q6NXN4 242 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 SMIM5Q71RC9 77 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 ESR2Q92731 530 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms