RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 TRIM15Q9C019 465 aa10.95□□□□□ -0.66
PRDM1-201ENST00000369089 CCDC90BQ9GZT6 254 aa10.95□□□□□ -0.66
PRDM1-201ENST00000369089 ABCA6Q8N139 1617 aa10.95□□□□□ -0.66
PRDM1-201ENST00000369089 TOM1L1O75674 476 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 GABBR2O75899 941 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 TRIM49P0CI25 452 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 TRIM49CP0CI26 452 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 PTPREP23469 700 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 BCAP31P51572 246 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 ALDH18A1P54886 795 aaKnown RBP10.94□□□□□ -0.66
PRDM1-201ENST00000369089 FXNQ16595 210 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 SPDYCQ5MJ68 293 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 NIPAL1Q6NVV3 410 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 CCDC28AQ8IWP9 274 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 CYP4X1Q8N118 509 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 WNK4Q96J92 1243 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 NUP85Q9BW27 656 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 ADNPQ9H2P0 1102 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 TFCP2L1Q9NZI6 479 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 PDE2AO00408 941 aaPredicted RBP10.94□□□□□ -0.66
PRDM1-201ENST00000369089 KRT37O76014 449 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 PAEPP09466 180 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 P4HA1P13674 534 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 SLC1A4P43007 532 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 ZAP70P43403 619 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 SLC9A3P48764 834 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 HERVK_113P62684 666 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 PPP2R5BQ15173 497 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 MAPK11Q15759 364 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 GCNAQ96QF7 691 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 VTA1Q9NP79 307 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 ANKARQ7Z5J8 1434 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 TMEM191CA6NGB0 347 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 ZSCAN5CA6NGD5 496 aaPredicted RBP10.94□□□□□ -0.66
PRDM1-201ENST00000369089 TMEM191BP0C7N4 346 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 TNNI2P48788 182 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 PHC1P78364 1004 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 NSUN2Q08J23 767 aaKnown RBP eCLIP10.94□□□□□ -0.66
PRDM1-201ENST00000369089 ACAP2Q15057 778 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 TSC22D1Q15714 1073 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 ZBTB41Q5SVQ8 909 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 TMC3Q7Z5M5 1100 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 SNX32Q86XE0 403 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 TAMM41Q96BW9 452 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 ACAT2Q9BWD1 397 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 LACRTQ9GZZ8 138 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 COPRSQ9NQ92 184 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 CNOT7Q9UIV1 285 aaKnown RBP10.94□□□□□ -0.66
PRDM1-201ENST00000369089 RTL9Q8NET4 1388 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 TRIM64A6NGJ6 449 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 TRIM64BA6NI03 449 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 TMEM114B3SHH9 223 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 B4E1Z4 1266 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 RAD51BO15315 384 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 SIN3BO75182 1162 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 KLHL2O95198 593 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 IFNB1P01574 187 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 GNG2P59768 71 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 ZNF200P98182 395 aaPredicted RBP10.94□□□□□ -0.66
PRDM1-201ENST00000369089 NELFCDQ8IXH7 590 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 LRRC20Q8TCA0 184 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 KCTD4Q8WVF5 259 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 DENND2AQ9ULE3 1009 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 EFR3BQ9Y2G0 817 aa10.94□□□□□ -0.66
PRDM1-201ENST00000369089 A0A1B0GW55 424 aa10.93□□□□□ -0.66
PRDM1-201ENST00000369089 A0A1W2PQ72 361 aa10.93□□□□□ -0.66
PRDM1-201ENST00000369089 PDZK1P1A8MUH7 402 aa10.93□□□□□ -0.66
PRDM1-201ENST00000369089 MIF4GDA9UHW6 222 aaKnown RBP10.93□□□□□ -0.66
PRDM1-201ENST00000369089 FOXN1O15353 648 aa10.93□□□□□ -0.66
PRDM1-201ENST00000369089 DUX4L2P0CJ85 424 aa10.93□□□□□ -0.66
PRDM1-201ENST00000369089 DUX4L3P0CJ86 424 aa10.93□□□□□ -0.66
PRDM1-201ENST00000369089 DUX4L4P0CJ87 422 aa10.93□□□□□ -0.66
PRDM1-201ENST00000369089 DUX4L5P0CJ88 424 aa10.93□□□□□ -0.66
PRDM1-201ENST00000369089 DUX4L6P0CJ89 424 aa10.93□□□□□ -0.66
PRDM1-201ENST00000369089 DUX4L7P0CJ90 424 aa10.93□□□□□ -0.66
PRDM1-201ENST00000369089 IL32P24001 234 aa10.93□□□□□ -0.66
PRDM1-201ENST00000369089 GRK2P25098 689 aa10.93□□□□□ -0.66
PRDM1-201ENST00000369089 TPTEP56180 551 aa10.93□□□□□ -0.66
PRDM1-201ENST00000369089 MAPK6Q16659 721 aa10.93□□□□□ -0.66
PRDM1-201ENST00000369089 SLC45A4Q5BKX6 768 aa10.93□□□□□ -0.66
PRDM1-201ENST00000369089 PRPF39Q86UA1 669 aaKnown RBP10.93□□□□□ -0.66
PRDM1-201ENST00000369089 PLEKHO2Q8TD55 490 aa10.93□□□□□ -0.66
PRDM1-201ENST00000369089 JMJD4Q9H9V9 463 aa10.93□□□□□ -0.66
PRDM1-201ENST00000369089 COPG2Q9UBF2 871 aa10.93□□□□□ -0.66
PRDM1-201ENST00000369089 DUX4Q9UBX2 424 aa10.93□□□□□ -0.66
PRDM1-201ENST00000369089 ASAP1Q9ULH1 1129 aa10.93□□□□□ -0.66
PRDM1-201ENST00000369089 WDR17Q8IZU2 1322 aa10.93□□□□□ -0.66
PRDM1-201ENST00000369089 PNPLA6Q8IY17 1366 aa10.93□□□□□ -0.66
PRDM1-201ENST00000369089 DDX3XO00571 662 aaKnown RBP eCLIP10.93□□□□□ -0.66
PRDM1-201ENST00000369089 CYP21A2P08686 494 aa10.93□□□□□ -0.66
PRDM1-201ENST00000369089 ADD1P35611 737 aaKnown RBP10.93□□□□□ -0.66
PRDM1-201ENST00000369089 RECQLP46063 649 aaPredicted RBP10.93□□□□□ -0.66
PRDM1-201ENST00000369089 SARSP49591 514 aaKnown RBP10.93□□□□□ -0.66
PRDM1-201ENST00000369089 SLC15A2Q16348 729 aa10.93□□□□□ -0.66
PRDM1-201ENST00000369089 ZC2HC1CQ53FD0 456 aaPredicted RBP10.93□□□□□ -0.66
PRDM1-201ENST00000369089 EAPPQ56P03 285 aaPredicted RBP10.93□□□□□ -0.66
PRDM1-201ENST00000369089 ITPRIPL1Q6GPH6 555 aa10.93□□□□□ -0.66
PRDM1-201ENST00000369089 RINT1Q6NUQ1 792 aa10.93□□□□□ -0.66
PRDM1-201ENST00000369089 ATG14Q6ZNE5 492 aa10.93□□□□□ -0.66
PRDM1-201ENST00000369089 PODNQ7Z5L7 613 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms