RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 ENTPD7Q9NQZ7 604 aa20.19■□□□□ 0.82
LMNA-204ENST00000368298 PTPRJQ12913 1337 aa20.19■□□□□ 0.82
LMNA-204ENST00000368298 BICDL2A1A5D9 508 aa20.18■□□□□ 0.82
LMNA-204ENST00000368298 CETN3O15182 167 aa20.18■□□□□ 0.82
LMNA-204ENST00000368298 CXCL14O95715 111 aa20.18■□□□□ 0.82
LMNA-204ENST00000368298 FGFR3P22607 806 aa20.18■□□□□ 0.82
LMNA-204ENST00000368298 TFAMQ00059 246 aaKnown RBP20.18■□□□□ 0.82
LMNA-204ENST00000368298 COL19A1Q14993 1142 aa20.18■□□□□ 0.82
LMNA-204ENST00000368298 PTPN14Q15678 1187 aa20.18■□□□□ 0.82
LMNA-204ENST00000368298 DUOXA2Q1HG44 320 aa20.18■□□□□ 0.82
LMNA-204ENST00000368298 TCEAL5Q5H9L2 206 aa20.18■□□□□ 0.82
LMNA-204ENST00000368298 CEP135Q66GS9 1140 aa20.18■□□□□ 0.82
LMNA-204ENST00000368298 TMEM130Q8N3G9 435 aa20.18■□□□□ 0.82
LMNA-204ENST00000368298 C1orf127Q8N9H9 656 aa20.18■□□□□ 0.82
LMNA-204ENST00000368298 MAFAQ8NHW3 353 aaPredicted RBP20.18■□□□□ 0.82
LMNA-204ENST00000368298 PLEKHO2Q8TD55 490 aa20.18■□□□□ 0.82
LMNA-204ENST00000368298 PPP2R3CQ969Q6 453 aa20.18■□□□□ 0.82
LMNA-204ENST00000368298 BORCS6Q96GS4 357 aa20.18■□□□□ 0.82
LMNA-204ENST00000368298 SUSD3Q96L08 255 aa20.18■□□□□ 0.82
LMNA-204ENST00000368298 FNBP1Q96RU3 617 aa20.18■□□□□ 0.82
LMNA-204ENST00000368298 FUCA2Q9BTY2 467 aa20.18■□□□□ 0.82
LMNA-204ENST00000368298 MRPL17Q9NRX2 175 aaKnown RBP20.18■□□□□ 0.82
LMNA-204ENST00000368298 ITGA11Q9UKX5 1188 aa20.18■□□□□ 0.82
LMNA-204ENST00000368298 EYSQ5T1H1 3165 aa20.18■□□□□ 0.82
LMNA-204ENST00000368298 TRIM49BA6NDI0 452 aa20.18■□□□□ 0.82
LMNA-204ENST00000368298 HIDE1A8MVS5 230 aa20.18■□□□□ 0.82
LMNA-204ENST00000368298 IKBKBO14920 756 aa20.18■□□□□ 0.82
LMNA-204ENST00000368298 GLUD2P49448 558 aa20.18■□□□□ 0.82
LMNA-204ENST00000368298 AP3M2P53677 418 aa20.18■□□□□ 0.82
LMNA-204ENST00000368298 PAK1Q13153 545 aa20.18■□□□□ 0.82
LMNA-204ENST00000368298 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.18■□□□□ 0.82
LMNA-204ENST00000368298 INTS8Q75QN2 995 aaKnown RBP20.18■□□□□ 0.82
LMNA-204ENST00000368298 ADGRD2Q7Z7M1 963 aa20.18■□□□□ 0.82
LMNA-204ENST00000368298 OR5B17Q8NGF7 314 aa20.18■□□□□ 0.82
LMNA-204ENST00000368298 NELFBQ8WX92 580 aa20.18■□□□□ 0.82
LMNA-204ENST00000368298 CCDC127Q96BQ5 260 aa20.18■□□□□ 0.82
LMNA-204ENST00000368298 ANKRD36BP1Q96IX9 119 aa20.18■□□□□ 0.82
LMNA-204ENST00000368298 DUSP9Q99956 384 aaKnown RBP20.18■□□□□ 0.82
LMNA-204ENST00000368298 NUB1Q9Y5A7 615 aa20.18■□□□□ 0.82
LMNA-204ENST00000368298 PCDHGC5Q9Y5F6 944 aa20.18■□□□□ 0.82
LMNA-204ENST00000368298 M0QZQ0 153 aa20.17■□□□□ 0.82
LMNA-204ENST00000368298 PPEF2O14830 753 aa20.17■□□□□ 0.82
LMNA-204ENST00000368298 NCK2O43639 380 aa20.17■□□□□ 0.82
LMNA-204ENST00000368298 URODP06132 367 aa20.17■□□□□ 0.82
LMNA-204ENST00000368298 TMEM191BP0C7N4 346 aa20.17■□□□□ 0.82
LMNA-204ENST00000368298 DLATP10515 647 aaKnown RBP20.17■□□□□ 0.82
LMNA-204ENST00000368298 TNNI1P19237 187 aa20.17■□□□□ 0.82
LMNA-204ENST00000368298 BRCC3P46736 316 aa20.17■□□□□ 0.82
LMNA-204ENST00000368298 NLRP12P59046 1061 aa20.17■□□□□ 0.82
LMNA-204ENST00000368298 LILRA4P59901 499 aa20.17■□□□□ 0.82
LMNA-204ENST00000368298 FAM171A1Q5VUB5 890 aa20.17■□□□□ 0.82
LMNA-204ENST00000368298 PLPP4Q5VZY2 271 aa20.17■□□□□ 0.82
LMNA-204ENST00000368298 USP37Q86T82 979 aa20.17■□□□□ 0.82
LMNA-204ENST00000368298 ZNF516Q92618 1163 aa20.17■□□□□ 0.82
LMNA-204ENST00000368298 CEP63Q96MT8 703 aa20.17■□□□□ 0.82
LMNA-204ENST00000368298 POP1Q99575 1024 aaKnown RBP20.17■□□□□ 0.82
LMNA-204ENST00000368298 CDCA3Q99618 268 aaPredicted RBP20.17■□□□□ 0.82
LMNA-204ENST00000368298 TTPALQ9BTX7 342 aa20.17■□□□□ 0.82
LMNA-204ENST00000368298 MTMR12Q9C0I1 747 aa20.17■□□□□ 0.82
LMNA-204ENST00000368298 RXFP1Q9HBX9 757 aa20.17■□□□□ 0.82
LMNA-204ENST00000368298 SIX4Q9UIU6 781 aa20.17■□□□□ 0.82
LMNA-204ENST00000368298 VWA8A3KMH1 1905 aa20.16■□□□□ 0.82
LMNA-204ENST00000368298 SYN3O14994 580 aa20.16■□□□□ 0.82
LMNA-204ENST00000368298 SLC16A3O15427 465 aaKnown RBP20.16■□□□□ 0.82
LMNA-204ENST00000368298 PNPLA4P41247 253 aa20.16■□□□□ 0.82
LMNA-204ENST00000368298 HYAL1Q12794 435 aa20.16■□□□□ 0.82
LMNA-204ENST00000368298 DUSP6Q16828 381 aa20.16■□□□□ 0.82
LMNA-204ENST00000368298 CT47A1Q5JQC4 288 aaPredicted RBP20.16■□□□□ 0.82
LMNA-204ENST00000368298 RTP2Q5QGT7 225 aa20.16■□□□□ 0.82
LMNA-204ENST00000368298 KLHL10Q6JEL2 608 aa20.16■□□□□ 0.82
LMNA-204ENST00000368298 PDXDC1Q6P996 788 aa20.16■□□□□ 0.82
LMNA-204ENST00000368298 FAM186BQ8IYM0 893 aa20.16■□□□□ 0.82
LMNA-204ENST00000368298 CSGALNACT2Q8N6G5 542 aa20.16■□□□□ 0.82
LMNA-204ENST00000368298 LRRC52Q8N7C0 313 aa20.16■□□□□ 0.82
LMNA-204ENST00000368298 PIK3R5Q8WYR1 880 aa20.16■□□□□ 0.82
LMNA-204ENST00000368298 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.16■□□□□ 0.824e-6■□□□□ 8.2
LMNA-204ENST00000368298 FNIP2Q9P278 1114 aa20.16■□□□□ 0.82
LMNA-204ENST00000368298 RWDD2AQ9UIY3 292 aa20.16■□□□□ 0.82
LMNA-204ENST00000368298 SCN1AP35498 2009 aa20.15■□□□□ 0.82
LMNA-204ENST00000368298 LRRIQ3A6PVS8 624 aaPredicted RBP20.15■□□□□ 0.82
LMNA-204ENST00000368298 TNNC2P02585 160 aa20.15■□□□□ 0.82
LMNA-204ENST00000368298 ITGB3P05106 788 aa20.15■□□□□ 0.82
LMNA-204ENST00000368298 VAMP7P51809 220 aa20.15■□□□□ 0.82
LMNA-204ENST00000368298 RBP5P82980 135 aa20.15■□□□□ 0.82
LMNA-204ENST00000368298 KCNC3Q14003 757 aa20.15■□□□□ 0.82
LMNA-204ENST00000368298 DPCR1Q3MIW9 517 aa20.15■□□□□ 0.82
LMNA-204ENST00000368298 C1orf220Q5T0J3 134 aa20.15■□□□□ 0.82
LMNA-204ENST00000368298 LMBRD2Q68DH5 695 aaPredicted RBP20.15■□□□□ 0.82
LMNA-204ENST00000368298 KIAA1841Q6NSI8 718 aa20.15■□□□□ 0.82
LMNA-204ENST00000368298 TRAPPC11Q7Z392 1133 aa20.15■□□□□ 0.82
LMNA-204ENST00000368298 FILIP1Q7Z7B0 1213 aa20.15■□□□□ 0.82
LMNA-204ENST00000368298 MICALL1Q8N3F8 863 aa20.15■□□□□ 0.82
LMNA-204ENST00000368298 RNF214Q8ND24 703 aa20.15■□□□□ 0.82
LMNA-204ENST00000368298 LNX1Q8TBB1 728 aaPredicted RBP20.15■□□□□ 0.82
LMNA-204ENST00000368298 AUTS2Q8WXX7 1259 aa20.15■□□□□ 0.82
LMNA-204ENST00000368298 TLE6Q9H808 572 aa20.15■□□□□ 0.82
LMNA-204ENST00000368298 CTNND2Q9UQB3 1225 aa20.15■□□□□ 0.82
LMNA-204ENST00000368298 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.14■□□□□ 0.81
LMNA-204ENST00000368298 SPTLC1O15269 473 aa20.14■□□□□ 0.81
LMNA-204ENST00000368298 C1RP00736 705 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms