RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 CACNA1HO95180 2353 aa8.83□□□□□ -1
H3F3A-201ENST00000366813 SOD2P04179 222 aa8.83□□□□□ -1
H3F3A-201ENST00000366813 ASLP04424 464 aa8.83□□□□□ -1
H3F3A-201ENST00000366813 HOXC6P09630 235 aa8.83□□□□□ -1
H3F3A-201ENST00000366813 SLC5A1P13866 664 aa8.83□□□□□ -1
H3F3A-201ENST00000366813 GRK2P25098 689 aa8.83□□□□□ -1
H3F3A-201ENST00000366813 HOXA7P31268 230 aaPredicted RBP8.83□□□□□ -1
H3F3A-201ENST00000366813 GRK3P35626 688 aa8.83□□□□□ -1
H3F3A-201ENST00000366813 LMOD3Q0VAK6 560 aa8.83□□□□□ -1
H3F3A-201ENST00000366813 DOCK1Q14185 1865 aa8.83□□□□□ -1
H3F3A-201ENST00000366813 PUM1Q14671 1186 aaKnown RBP eCLIP8.83□□□□□ -1
H3F3A-201ENST00000366813 RRP1BQ14684 758 aaKnown RBP8.83□□□□□ -1
H3F3A-201ENST00000366813 PSRC1Q6PGN9 363 aaPredicted RBP8.83□□□□□ -1
H3F3A-201ENST00000366813 OTOP2Q7RTS6 562 aa8.83□□□□□ -1
H3F3A-201ENST00000366813 ANKRD33Q7Z3H0 272 aa8.83□□□□□ -1
H3F3A-201ENST00000366813 PCDH19Q8TAB3 1148 aa8.83□□□□□ -1
H3F3A-201ENST00000366813 PNNQ9H307 717 aaKnown RBP8.83□□□□□ -1
H3F3A-201ENST00000366813 SMPD4Q9NXE4 827 aa8.83□□□□□ -1
H3F3A-201ENST00000366813 TNPO3Q9Y5L0 923 aaKnown RBP8.83□□□□□ -1
H3F3A-201ENST00000366813 GBF1Q92538 1859 aa8.83□□□□□ -1
H3F3A-201ENST00000366813 LOC285556D6RIA3 1793 aa8.83□□□□□ -1
H3F3A-201ENST00000366813 KMT2BQ9UMN6 2715 aaPredicted RBP8.82□□□□□ -1
H3F3A-201ENST00000366813 WNT9AO14904 365 aa8.82□□□□□ -1
H3F3A-201ENST00000366813 GLRX3O76003 335 aaKnown RBP8.82□□□□□ -1
H3F3A-201ENST00000366813 PGK1P00558 417 aa8.82□□□□□ -1
H3F3A-201ENST00000366813 FGBP02675 491 aa8.82□□□□□ -1
H3F3A-201ENST00000366813 ID4P47928 161 aa8.82□□□□□ -1
H3F3A-201ENST00000366813 MASP1P48740 699 aa8.82□□□□□ -1
H3F3A-201ENST00000366813 TMEM199Q8N511 208 aa8.82□□□□□ -1
H3F3A-201ENST00000366813 TXNDC5Q8NBS9 432 aaKnown RBP8.82□□□□□ -1
H3F3A-201ENST00000366813 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.82□□□□□ -1
H3F3A-201ENST00000366813 ARNTL2Q8WYA1 636 aa8.82□□□□□ -1
H3F3A-201ENST00000366813 LOXL4Q96JB6 756 aa8.82□□□□□ -1
H3F3A-201ENST00000366813 LCORQ96JN0 433 aaPredicted RBP8.82□□□□□ -1
H3F3A-201ENST00000366813 PUS3Q9BZE2 481 aaKnown RBP8.82□□□□□ -1
H3F3A-201ENST00000366813 INVSQ9Y283 1065 aa8.82□□□□□ -1
H3F3A-201ENST00000366813 A0A0G2JMZ2 1700 aa8.82□□□□□ -1
H3F3A-201ENST00000366813 A0A087X0B3 334 aa8.81□□□□□ -1
H3F3A-201ENST00000366813 MED19A0JLT2 244 aaPredicted RBP8.81□□□□□ -1
H3F3A-201ENST00000366813 FAM47E-STBD1D6RA91 191 aa8.81□□□□□ -1
H3F3A-201ENST00000366813 OPA1O60313 960 aa8.81□□□□□ -1
H3F3A-201ENST00000366813 ENTPD3O75355 529 aa8.81□□□□□ -1
H3F3A-201ENST00000366813 CNMDO75829 334 aa8.81□□□□□ -1
H3F3A-201ENST00000366813 PLATP00750 562 aa8.81□□□□□ -1
H3F3A-201ENST00000366813 CYP1A1P04798 512 aaPredicted RBP8.81□□□□□ -1
H3F3A-201ENST00000366813 APPP05067 770 aa8.81□□□□□ -1
H3F3A-201ENST00000366813 CA3P07451 260 aa8.81□□□□□ -1
H3F3A-201ENST00000366813 IGFALSP35858 605 aa8.81□□□□□ -1
H3F3A-201ENST00000366813 ZNF460Q14592 562 aa8.81□□□□□ -1
H3F3A-201ENST00000366813 CCDC57Q2TAC2 916 aa8.81□□□□□ -1
H3F3A-201ENST00000366813 EPHA10Q5JZY3 1008 aa8.81□□□□□ -1
H3F3A-201ENST00000366813 STEAP3Q658P3 488 aa8.81□□□□□ -1
H3F3A-201ENST00000366813 LMBR1LQ6UX01 489 aa8.81□□□□□ -1
H3F3A-201ENST00000366813 LRRTM3Q86VH5 581 aa8.81□□□□□ -1
H3F3A-201ENST00000366813 TOE1Q96GM8 510 aaKnown RBP8.81□□□□□ -1
H3F3A-201ENST00000366813 IDI2Q9BXS1 227 aa8.81□□□□□ -1
H3F3A-201ENST00000366813 TMX1Q9H3N1 280 aa8.81□□□□□ -1
H3F3A-201ENST00000366813 IPPKQ9H8X2 491 aa8.81□□□□□ -1
H3F3A-201ENST00000366813 IL23AQ9NPF7 189 aa8.81□□□□□ -1
H3F3A-201ENST00000366813 XPNPEP3Q9NQH7 507 aa8.81□□□□□ -1
H3F3A-201ENST00000366813 DDX4Q9NQI0 724 aaKnown RBP8.81□□□□□ -1
H3F3A-201ENST00000366813 TMOD4Q9NZQ9 345 aa8.81□□□□□ -1
H3F3A-201ENST00000366813 MYRFQ9Y2G1 1151 aa8.81□□□□□ -1
H3F3A-201ENST00000366813 FAM186AA6NE01 2351 aa8.81□□□□□ -1
H3F3A-201ENST00000366813 CFAP47Q6ZTR5 3102 aa8.81□□□□□ -1
H3F3A-201ENST00000366813 ATRXP46100 2492 aa8.81□□□□□ -1
H3F3A-201ENST00000366813 GAKO14976 1311 aa8.81□□□□□ -1
H3F3A-201ENST00000366813 ANKRD62A6NC57 917 aa8.8□□□□□ -1
H3F3A-201ENST00000366813 DGKIO75912 1065 aa8.8□□□□□ -1
H3F3A-201ENST00000366813 KCNA5P22460 613 aa8.8□□□□□ -1
H3F3A-201ENST00000366813 PRDX5P30044 214 aa8.8□□□□□ -1
H3F3A-201ENST00000366813 CYP2C18P33260 490 aa8.8□□□□□ -1
H3F3A-201ENST00000366813 BACE1P56817 501 aa8.8□□□□□ -1
H3F3A-201ENST00000366813 PICALMQ13492 652 aa8.8□□□□□ -1
H3F3A-201ENST00000366813 GRB14Q14449 540 aa8.8□□□□□ -1
H3F3A-201ENST00000366813 CR1LQ2VPA4 569 aa8.8□□□□□ -1
H3F3A-201ENST00000366813 CAVIN4Q5BKX8 364 aa8.8□□□□□ -1
H3F3A-201ENST00000366813 RNF187Q5TA31 235 aaPredicted RBP8.8□□□□□ -1
H3F3A-201ENST00000366813 ASCL5Q7RTU5 278 aa8.8□□□□□ -1
H3F3A-201ENST00000366813 DPP9Q86TI2 863 aa8.8□□□□□ -1
H3F3A-201ENST00000366813 ZC3H7AQ8IWR0 971 aaKnown RBP8.8□□□□□ -1
H3F3A-201ENST00000366813 RBM15Q96T37 977 aaKnown RBP eCLIP8.8□□□□□ -1
H3F3A-201ENST00000366813 MTIF3Q9H2K0 278 aaKnown RBP8.8□□□□□ -1
H3F3A-201ENST00000366813 UBE2ZQ9H832 354 aaPredicted RBP8.8□□□□□ -1
H3F3A-201ENST00000366813 PCDHB4Q9Y5E5 795 aa8.8□□□□□ -1
H3F3A-201ENST00000366813 SLC4A7Q9Y6M7 1214 aa8.8□□□□□ -1
H3F3A-201ENST00000366813 NCOR2Q9Y618 2525 aa8.8□□□□□ -1
H3F3A-201ENST00000366813 DOCK2Q92608 1830 aa8.8□□□□□ -1
H3F3A-201ENST00000366813 CKMP06732 381 aa8.8□□□□□ -1
H3F3A-201ENST00000366813 MYCLP1P12525 358 aaPredicted RBP8.8□□□□□ -1
H3F3A-201ENST00000366813 LEXMQ3ZCV2 418 aa8.8□□□□□ -1
H3F3A-201ENST00000366813 CNNM4Q6P4Q7 775 aa8.8□□□□□ -1
H3F3A-201ENST00000366813 ABHD17CQ6PCB6 329 aa8.8□□□□□ -1
H3F3A-201ENST00000366813 RNF180Q86T96 592 aa8.8□□□□□ -1
H3F3A-201ENST00000366813 CHST13Q8NET6 341 aa8.8□□□□□ -1
H3F3A-201ENST00000366813 CLIC6Q96NY7 704 aa8.8□□□□□ -1
H3F3A-201ENST00000366813 TARS2Q9BW92 718 aaKnown RBP8.8□□□□□ -1
H3F3A-201ENST00000366813 JAM3Q9BX67 310 aa8.8□□□□□ -1
H3F3A-201ENST00000366813 OSBPL5Q9H0X9 879 aaPredicted RBP8.8□□□□□ -1
H3F3A-201ENST00000366813 L2HGDHQ9H9P8 463 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms