RNA–Protein interactions for RNA: ENST00000364033.1

RNU1-42P-201, Transcript of RNA, U1 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU1-42P, Length 160 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-42P-201ENST00000364033 EXTL3O43909 919 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 PFKFB2O60825 505 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 DKC1O60832 514 aaKnown RBP eCLIP1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 KINO60870 393 aaKnown RBP1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 HIP1RO75146 1068 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 XYLBO75191 536 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 MOSPD3O75425 235 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 DGAT1O75907 488 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 CD2BP2O95400 341 aaKnown RBP1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 ZIC2O95409 532 aaPredicted RBP1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 EFEMP2O95967 443 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 TOP3BO95985 862 aaKnown RBP1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 F13A1P00488 732 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 ABL1P00519 1130 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 LRG1P02750 347 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 PTPN2P17706 415 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 XBP1P17861 261 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 CYP11B2P19099 503 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 CDK11BP21127 795 aaKnown RBP1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 FGFR3P22607 806 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 GJB2P29033 226 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 MARCKSP29966 332 aaPredicted RBP1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 NMT1P30419 496 aaKnown RBP1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 AXLP30530 894 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 TNFSF9P41273 254 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 CXCL12P48061 93 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 ME1P48163 572 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 GPR15P49685 360 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 ZNF165P49910 485 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 TOB1P50616 345 aaPredicted RBP1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 RAB27AP51159 221 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 YARSP54577 528 aaKnown RBP1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 SEC13P55735 322 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 EVCP57679 992 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 STARD6P59095 220 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 FAM193AP78312 1265 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 CYP4F8P98187 520 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 SATB1Q01826 763 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 TNK2Q07912 1038 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 DSC1Q08554 894 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 SPIRE1Q08AE8 756 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 ST3GAL1Q11201 340 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 DUSP4Q13115 394 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 PSMD2Q13200 908 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 PTGDRQ13258 359 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 TUSC3Q13454 348 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 HTR4Q13639 388 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 RAB33AQ14088 237 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 TRIM29Q14134 588 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 SIM2Q14190 667 aaPredicted RBP1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 GAS6Q14393 721 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 MXD4Q14582 209 aaPredicted RBP1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 PUM1Q14671 1186 aaKnown RBP eCLIP1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 PON2Q15165 354 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 SAFBQ15424 915 aaKnown RBP eCLIP1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 SF3A2Q15428 464 aaKnown RBP1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 NAB2Q15742 525 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 MLF2Q15773 248 aaPredicted RBP1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 CAMK4Q16566 473 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 MAPK6Q16659 721 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 UPP1Q16831 310 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 SLC10A6Q3KNW5 377 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 FOXD4L6Q3SYB3 417 aaPredicted RBP1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 PABPC1LQ4VXU2 614 aaKnown RBP1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 PPM1JQ5JR12 505 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 TTC38Q5R3I4 469 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 ZBTB41Q5SVQ8 909 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 N4BP2L1Q5TBK1 243 aaPredicted RBP1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 CYP4A22Q5TCH4 519 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 ATF7IP2Q5U623 682 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 TAF3Q5VWG9 929 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 TRIM68Q6AZZ1 485 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 PPP4R3AQ6IN85 833 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 PKN3Q6P5Z2 889 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 NOTUMQ6P988 496 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 SLC27A1Q6PCB7 646 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 TXNDC11Q6PKC3 985 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 VITQ6UXI7 678 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 FOXD4L3Q6VB84 417 aaPredicted RBP1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 DSTYKQ6XUX3 929 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 ZNF852Q6ZMS4 543 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 RNF19BQ6ZMZ0 732 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 C15orf39Q6ZRI6 1047 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 CCDC73Q6ZRK6 1079 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 Q6ZS52 159 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 PDZD4Q76G19 769 aaPredicted RBP1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 CEP68Q76N32 757 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 ARHGAP30Q7Z6I6 1101 aaPredicted RBP1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 DNAJB7Q7Z6W7 309 aaPredicted RBP1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 LRRTM3Q86VH5 581 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 ARID3BQ8IVW6 561 aaPredicted RBP1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 ZBTB8OSQ8IWT0 167 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 NPAS3Q8IXF0 933 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 YAF2Q8IY57 180 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 SLFN12Q8IYM2 578 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 HACE1Q8IYU2 909 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 RNF168Q8IYW5 571 aaPredicted RBP1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 TTC9BQ8N6N2 239 aa1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 ZNF713Q8N859 430 aaPredicted RBP1.68□□□□□ -2.14
RNU1-42P-201ENST00000364033 FRMD1Q8N878 549 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms