RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 IKBKEQ14164 716 aa22.23■■□□□ 1.15
SHISA4-201ENST00000362011 ZBTB6Q15916 424 aa22.23■■□□□ 1.15
SHISA4-201ENST00000362011 GLRA4Q5JXX5 417 aa22.23■■□□□ 1.15
SHISA4-201ENST00000362011 RPUSD2Q8IZ73 545 aaKnown RBP22.23■■□□□ 1.15
SHISA4-201ENST00000362011 CPLX3Q8WVH0 158 aa22.23■■□□□ 1.15
SHISA4-201ENST00000362011 GAD1Q99259 594 aa22.23■■□□□ 1.15
SHISA4-201ENST00000362011 EDEM3Q9BZQ6 932 aa22.23■■□□□ 1.15
SHISA4-201ENST00000362011 TTYH3Q9C0H2 523 aa22.23■■□□□ 1.15
SHISA4-201ENST00000362011 NKX2-4Q9H2Z4 354 aa22.23■■□□□ 1.15
SHISA4-201ENST00000362011 RNF216Q9NWF9 866 aaPredicted RBP22.23■■□□□ 1.15
SHISA4-201ENST00000362011 DPP3Q9NY33 737 aa22.23■■□□□ 1.15
SHISA4-201ENST00000362011 CEP72Q9P209 647 aa22.23■■□□□ 1.15
SHISA4-201ENST00000362011 ITGA11Q9UKX5 1188 aa22.23■■□□□ 1.15
SHISA4-201ENST00000362011 DAAM1Q9Y4D1 1078 aa22.23■■□□□ 1.15
SHISA4-201ENST00000362011 A0A1W2PQJ5 194 aa22.22■■□□□ 1.15
SHISA4-201ENST00000362011 ZC3H11AO75152 810 aaKnown RBP eCLIP22.22■■□□□ 1.15
SHISA4-201ENST00000362011 ITGB3P05106 788 aa22.22■■□□□ 1.15
SHISA4-201ENST00000362011 KLHDC7AQ5VTJ3 777 aa22.22■■□□□ 1.15
SHISA4-201ENST00000362011 DPY19L2P1Q6NXN4 242 aa22.22■■□□□ 1.15
SHISA4-201ENST00000362011 CCDC186Q7Z3E2 898 aa22.22■■□□□ 1.15
SHISA4-201ENST00000362011 CACNA2D4Q7Z3S7 1137 aa22.22■■□□□ 1.15
SHISA4-201ENST00000362011 C1orf127Q8N9H9 656 aa22.22■■□□□ 1.15
SHISA4-201ENST00000362011 CCDC150Q8NCX0 1101 aa22.22■■□□□ 1.15
SHISA4-201ENST00000362011 ZFP42Q96MM3 310 aa22.22■■□□□ 1.15
SHISA4-201ENST00000362011 IMPG2Q9BZV3 1241 aa22.22■■□□□ 1.15
SHISA4-201ENST00000362011 SLC28A3Q9HAS3 691 aa22.22■■□□□ 1.15
SHISA4-201ENST00000362011 TMEM161AQ9NX61 479 aa22.22■■□□□ 1.15
SHISA4-201ENST00000362011 APEX2Q9UBZ4 518 aa22.22■■□□□ 1.15
SHISA4-201ENST00000362011 CAPN11Q9UMQ6 739 aa22.22■■□□□ 1.15
SHISA4-201ENST00000362011 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.22■■□□□ 1.15
SHISA4-201ENST00000362011 GBF1Q92538 1859 aa22.21■■□□□ 1.15
SHISA4-201ENST00000362011 ARL5CA6NH57 179 aa22.21■■□□□ 1.15
SHISA4-201ENST00000362011 AKR1B15C9JRZ8 316 aaPredicted RBP22.21■■□□□ 1.15
SHISA4-201ENST00000362011 PTGESO14684 152 aa22.21■■□□□ 1.15
SHISA4-201ENST00000362011 EPHB6O15197 1021 aa22.21■■□□□ 1.15
SHISA4-201ENST00000362011 NOL4O94818 638 aa22.21■■□□□ 1.15
SHISA4-201ENST00000362011 CASP14P31944 242 aa22.21■■□□□ 1.15
SHISA4-201ENST00000362011 POLR2FP61218 127 aaKnown RBP22.21■■□□□ 1.15
SHISA4-201ENST00000362011 APBA1Q02410 837 aa22.21■■□□□ 1.15
SHISA4-201ENST00000362011 WDR44Q5JSH3 913 aa22.21■■□□□ 1.15
SHISA4-201ENST00000362011 OTOP2Q7RTS6 562 aa22.21■■□□□ 1.15
SHISA4-201ENST00000362011 NT5C1BQ96P26 610 aa22.21■■□□□ 1.15
SHISA4-201ENST00000362011 SLC38A7Q9NVC3 462 aa22.21■■□□□ 1.15
SHISA4-201ENST00000362011 FBXL5Q9UKA1 691 aa22.21■■□□□ 1.15
SHISA4-201ENST00000362011 LRFN2Q9ULH4 789 aa22.21■■□□□ 1.15
SHISA4-201ENST00000362011 R3HCC1Q9Y3T6 440 aaKnown RBP22.21■■□□□ 1.15
SHISA4-201ENST00000362011 PCDHB7Q9Y5E2 793 aa22.21■■□□□ 1.15
SHISA4-201ENST00000362011 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.2■■□□□ 1.14
SHISA4-201ENST00000362011 LRRN2O75325 713 aa22.2■■□□□ 1.14
SHISA4-201ENST00000362011 CST3P01034 146 aaPredicted RBP22.2■■□□□ 1.14
SHISA4-201ENST00000362011 KRT19P08727 400 aa22.2■■□□□ 1.14
SHISA4-201ENST00000362011 UCHL3P15374 230 aa22.2■■□□□ 1.14
SHISA4-201ENST00000362011 CYP3A5P20815 502 aa22.2■■□□□ 1.14
SHISA4-201ENST00000362011 RFX1P22670 979 aa22.2■■□□□ 1.14
SHISA4-201ENST00000362011 MRPS5P82675 430 aaKnown RBP22.2■■□□□ 1.14
SHISA4-201ENST00000362011 LRMPQ12912 555 aa22.2■■□□□ 1.14
SHISA4-201ENST00000362011 CNGA4Q8IV77 575 aa22.2■■□□□ 1.14
SHISA4-201ENST00000362011 ZNF397Q8NF99 534 aaPredicted RBP22.2■■□□□ 1.14
SHISA4-201ENST00000362011 PPM1EQ8WY54 764 aa22.2■■□□□ 1.14
SHISA4-201ENST00000362011 C18orf25Q96B23 403 aaPredicted RBP22.2■■□□□ 1.14
SHISA4-201ENST00000362011 PPP1R10Q96QC0 940 aaKnown RBP22.2■■□□□ 1.14
SHISA4-201ENST00000362011 PI4K2AQ9BTU6 479 aa22.2■■□□□ 1.14
SHISA4-201ENST00000362011 NLRC4Q9NPP4 1024 aa22.2■■□□□ 1.14
SHISA4-201ENST00000362011 RNF19AQ9NV58 838 aa22.2■■□□□ 1.14
SHISA4-201ENST00000362011 TUBGCP4Q9UGJ1 667 aa22.2■■□□□ 1.14
SHISA4-201ENST00000362011 SIX4Q9UIU6 781 aa22.2■■□□□ 1.14
SHISA4-201ENST00000362011 LUC7L2Q9Y383 392 aaKnown RBP22.2■■□□□ 1.14
SHISA4-201ENST00000362011 FHOD1Q9Y613 1164 aa22.2■■□□□ 1.14
SHISA4-201ENST00000362011 ABHD14A-ACY1A0A1B0GW23 586 aa22.19■■□□□ 1.14
SHISA4-201ENST00000362011 INPPL1O15357 1258 aa22.19■■□□□ 1.14
SHISA4-201ENST00000362011 MFAP3LO75121 409 aa22.19■■□□□ 1.14
SHISA4-201ENST00000362011 OFD1O75665 1012 aa22.19■■□□□ 1.14
SHISA4-201ENST00000362011 CLSTN1O94985 981 aa22.19■■□□□ 1.14
SHISA4-201ENST00000362011 THP07101 528 aa22.19■■□□□ 1.14
SHISA4-201ENST00000362011 POLR2BP30876 1174 aaKnown RBP22.19■■□□□ 1.14
SHISA4-201ENST00000362011 SCNN1GP51170 649 aa22.19■■□□□ 1.14
SHISA4-201ENST00000362011 GUCY2FP51841 1108 aa22.19■■□□□ 1.14
SHISA4-201ENST00000362011 ZBED6P86452 979 aa22.19■■□□□ 1.14
SHISA4-201ENST00000362011 SGSM1Q2NKQ1 1148 aa22.19■■□□□ 1.14
SHISA4-201ENST00000362011 GJB7Q6PEY0 223 aa22.19■■□□□ 1.14
SHISA4-201ENST00000362011 GLB1LQ6UWU2 654 aa22.19■■□□□ 1.14
SHISA4-201ENST00000362011 ARHGEF19Q8IW93 802 aa22.19■■□□□ 1.14
SHISA4-201ENST00000362011 MIOSQ9NXC5 875 aa22.19■■□□□ 1.14
SHISA4-201ENST00000362011 PCDHA11Q9Y5I1 949 aa22.19■■□□□ 1.14
SHISA4-201ENST00000362011 KIAA1671Q9BY89 1806 aa22.18■■□□□ 1.14
SHISA4-201ENST00000362011 EFCAB14O75071 495 aa22.18■■□□□ 1.14
SHISA4-201ENST00000362011 ASS1P00966 412 aaKnown RBP22.18■■□□□ 1.14
SHISA4-201ENST00000362011 ATICP31939 592 aa22.18■■□□□ 1.14
SHISA4-201ENST00000362011 KRT9P35527 623 aa22.18■■□□□ 1.14
SHISA4-201ENST00000362011 MYL6P60660 151 aa22.18■■□□□ 1.14
SHISA4-201ENST00000362011 NOP14P78316 857 aaKnown RBP22.18■■□□□ 1.14
SHISA4-201ENST00000362011 RBP5P82980 135 aa22.18■■□□□ 1.14
SHISA4-201ENST00000362011 GOLGA8FQ08AF8 430 aa22.18■■□□□ 1.14
SHISA4-201ENST00000362011 GOLGA8DPQ0D2H9 430 aa22.18■■□□□ 1.14
SHISA4-201ENST00000362011 GRIK3Q13003 919 aa22.18■■□□□ 1.14
SHISA4-201ENST00000362011 IQCEQ6IPM2 695 aa22.18■■□□□ 1.14
SHISA4-201ENST00000362011 PHLDB3Q6NSJ2 640 aa22.18■■□□□ 1.14
SHISA4-201ENST00000362011 NPAS4Q8IUM7 802 aa22.18■■□□□ 1.14
SHISA4-201ENST00000362011 GSTCDQ8NEC7 633 aa22.18■■□□□ 1.14
SHISA4-201ENST00000362011 URGCPQ8TCY9 931 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms