RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 IGSF22Q8N9C0 903 aa23.1■■□□□ 1.29
CD47-202ENST00000361309 ASB16Q96NS5 453 aa23.1■■□□□ 1.29
CD47-202ENST00000361309 TRMT61BQ9BVS5 477 aaKnown RBP23.1■■□□□ 1.29
CD47-202ENST00000361309 EPC1Q9H2F5 836 aa23.1■■□□□ 1.29
CD47-202ENST00000361309 NOL7Q9UMY1 257 aaKnown RBP23.1■■□□□ 1.29
CD47-202ENST00000361309 LIMCH1Q9UPQ0 1083 aa23.1■■□□□ 1.29
CD47-202ENST00000361309 SMG5Q9UPR3 1016 aaKnown RBP23.1■■□□□ 1.29
CD47-202ENST00000361309 DNM3Q9UQ16 869 aa23.1■■□□□ 1.29
CD47-202ENST00000361309 STK24Q9Y6E0 443 aa23.1■■□□□ 1.29
CD47-202ENST00000361309 MEFVO15553 781 aaPredicted RBP23.09■■□□□ 1.29
CD47-202ENST00000361309 CYP4A22Q5TCH4 519 aa23.09■■□□□ 1.29
CD47-202ENST00000361309 HS6ST3Q8IZP7 471 aa23.09■■□□□ 1.29
CD47-202ENST00000361309 ZBTB45Q96K62 511 aaPredicted RBP23.09■■□□□ 1.29
CD47-202ENST00000361309 SUSD3Q96L08 255 aa23.09■■□□□ 1.29
CD47-202ENST00000361309 DRC1Q96MC2 740 aa23.09■■□□□ 1.29
CD47-202ENST00000361309 ZSWIM3Q96MP5 696 aa23.09■■□□□ 1.29
CD47-202ENST00000361309 LLPHQ9BRT6 129 aaKnown RBP23.09■■□□□ 1.29
CD47-202ENST00000361309 RUSC1Q9BVN2 902 aa23.09■■□□□ 1.29
CD47-202ENST00000361309 RBM19Q9Y4C8 960 aaKnown RBP23.09■■□□□ 1.29
CD47-202ENST00000361309 RALGAPA1Q6GYQ0 2036 aa23.09■■□□□ 1.29
CD47-202ENST00000361309 PP2D1A8MPX8 630 aa23.08■■□□□ 1.29
CD47-202ENST00000361309 MAN2B1O00754 1011 aa23.08■■□□□ 1.29
CD47-202ENST00000361309 SLC16A4O15374 487 aa23.08■■□□□ 1.29
CD47-202ENST00000361309 MCM4P33991 863 aa23.08■■□□□ 1.29
CD47-202ENST00000361309 TWF1Q12792 350 aa23.08■■□□□ 1.29
CD47-202ENST00000361309 MAPK7Q13164 816 aa23.08■■□□□ 1.29
CD47-202ENST00000361309 PTGDRQ13258 359 aa23.08■■□□□ 1.29
CD47-202ENST00000361309 IQCEQ6IPM2 695 aa23.08■■□□□ 1.29
CD47-202ENST00000361309 RINT1Q6NUQ1 792 aa23.08■■□□□ 1.29
CD47-202ENST00000361309 ZNF687Q8N1G0 1237 aa23.08■■□□□ 1.29
CD47-202ENST00000361309 ELMOD1Q8N336 334 aa23.08■■□□□ 1.29
CD47-202ENST00000361309 GPR161Q8N6U8 529 aaKnown RBP23.08■■□□□ 1.29
CD47-202ENST00000361309 SECISBP2LQ93073 1101 aaKnown RBP23.08■■□□□ 1.29
CD47-202ENST00000361309 ZNF512Q96ME7 567 aaPredicted RBP23.08■■□□□ 1.29
CD47-202ENST00000361309 TBC1D32Q96NH3 1257 aa23.08■■□□□ 1.29
CD47-202ENST00000361309 RAB34Q9BZG1 259 aa23.08■■□□□ 1.29
CD47-202ENST00000361309 CEP72Q9P209 647 aa23.08■■□□□ 1.29
CD47-202ENST00000361309 AFF4Q9UHB7 1163 aaKnown RBP23.08■■□□□ 1.29
CD47-202ENST00000361309 ANK1P16157 1881 aa23.08■■□□□ 1.29
CD47-202ENST00000361309 GDI1P31150 447 aa23.07■■□□□ 1.28
CD47-202ENST00000361309 KRT79Q5XKE5 535 aa23.07■■□□□ 1.28
CD47-202ENST00000361309 ZNF280DQ6N043 979 aa23.07■■□□□ 1.28
CD47-202ENST00000361309 VITQ6UXI7 678 aa23.07■■□□□ 1.28
CD47-202ENST00000361309 C1orf186Q6ZWK4 172 aa23.07■■□□□ 1.28
CD47-202ENST00000361309 MAP4K3Q8IVH8 894 aa23.07■■□□□ 1.28
CD47-202ENST00000361309 DDX12PQ92771 950 aa23.07■■□□□ 1.28
CD47-202ENST00000361309 SMARCD2Q92925 531 aa23.07■■□□□ 1.28
CD47-202ENST00000361309 IRF7Q92985 503 aa23.07■■□□□ 1.28
CD47-202ENST00000361309 ZNF334Q9HCZ1 680 aaPredicted RBP23.07■■□□□ 1.28
CD47-202ENST00000361309 PCDHB6Q9Y5E3 794 aa23.07■■□□□ 1.28
CD47-202ENST00000361309 TPRP12270 2363 aaKnown RBP23.06■■□□□ 1.28
CD47-202ENST00000361309 SFI1A8K8P3 1242 aa23.06■■□□□ 1.28
CD47-202ENST00000361309 MOSPD3O75425 235 aa23.06■■□□□ 1.28
CD47-202ENST00000361309 MYL4P12829 197 aa23.06■■□□□ 1.28
CD47-202ENST00000361309 GJA1P17302 382 aa23.06■■□□□ 1.28
CD47-202ENST00000361309 PSMC3P17980 439 aa23.06■■□□□ 1.28
CD47-202ENST00000361309 CDC25AP30304 524 aa23.06■■□□□ 1.28
CD47-202ENST00000361309 TOB1P50616 345 aaPredicted RBP23.06■■□□□ 1.28
CD47-202ENST00000361309 SLC10A6Q3KNW5 377 aa23.06■■□□□ 1.28
CD47-202ENST00000361309 SEZ6Q53EL9 994 aa23.06■■□□□ 1.28
CD47-202ENST00000361309 RNF19BQ6ZMZ0 732 aa23.06■■□□□ 1.28
CD47-202ENST00000361309 KCNK18Q7Z418 384 aa23.06■■□□□ 1.28
CD47-202ENST00000361309 FAM184AQ8NB25 1140 aa23.06■■□□□ 1.28
CD47-202ENST00000361309 APPL2Q8NEU8 664 aa23.06■■□□□ 1.28
CD47-202ENST00000361309 FAM126AQ9BYI3 521 aaPredicted RBP23.06■■□□□ 1.28
CD47-202ENST00000361309 CHRDQ9H2X0 955 aa23.06■■□□□ 1.28
CD47-202ENST00000361309 C17orf75Q9HAS0 396 aa23.06■■□□□ 1.28
CD47-202ENST00000361309 ANKFY1Q9P2R3 1169 aa23.06■■□□□ 1.28
CD47-202ENST00000361309 TDGF1P13385 188 aa23.05■■□□□ 1.28
CD47-202ENST00000361309 CPB1P15086 417 aa23.05■■□□□ 1.28
CD47-202ENST00000361309 VIPR2P41587 438 aa23.05■■□□□ 1.28
CD47-202ENST00000361309 HMGN5P82970 282 aaKnown RBP23.05■■□□□ 1.28
CD47-202ENST00000361309 IL17AQ16552 155 aa23.05■■□□□ 1.28
CD47-202ENST00000361309 TMEM130Q8N3G9 435 aa23.05■■□□□ 1.28
CD47-202ENST00000361309 FAM3CQ92520 227 aa23.05■■□□□ 1.28
CD47-202ENST00000361309 ASAH2Q9NR71 780 aa23.05■■□□□ 1.28
CD47-202ENST00000361309 TUBGCP4Q9UGJ1 667 aa23.05■■□□□ 1.28
CD47-202ENST00000361309 MAFFQ9ULX9 164 aa23.05■■□□□ 1.28
CD47-202ENST00000361309 PCDHB8Q9UN66 801 aa23.05■■□□□ 1.28
CD47-202ENST00000361309 PIAS3Q9Y6X2 628 aa23.05■■□□□ 1.28
CD47-202ENST00000361309 SEC24BO95487 1268 aa23.04■■□□□ 1.28
CD47-202ENST00000361309 MARCKSP29966 332 aaPredicted RBP23.04■■□□□ 1.28
CD47-202ENST00000361309 EPHA5P54756 1037 aa23.04■■□□□ 1.28
CD47-202ENST00000361309 RAD51AP2Q09MP3 1159 aa23.04■■□□□ 1.28
CD47-202ENST00000361309 STRN3Q13033 797 aa23.04■■□□□ 1.28
CD47-202ENST00000361309 NOLC1Q14978 699 aaKnown RBP eCLIP23.04■■□□□ 1.286e-6■□□□□ 10.9
CD47-202ENST00000361309 ZSCAN18Q8TBC5 510 aaPredicted RBP23.04■■□□□ 1.28
CD47-202ENST00000361309 DEPDC1BQ8WUY9 529 aa23.04■■□□□ 1.28
CD47-202ENST00000361309 NTPCRQ9BSD7 190 aaKnown RBP23.04■■□□□ 1.28
CD47-202ENST00000361309 MMTAG2Q9BU76 263 aaKnown RBP23.04■■□□□ 1.28
CD47-202ENST00000361309 LMAN1LQ9HAT1 526 aa23.04■■□□□ 1.28
CD47-202ENST00000361309 TRPV5Q9NQA5 729 aa23.04■■□□□ 1.28
CD47-202ENST00000361309 CACNA1BQ00975 2339 aa23.04■■□□□ 1.28
CD47-202ENST00000361309 NCANO14594 1321 aa23.04■■□□□ 1.28
CD47-202ENST00000361309 KIF26AQ9ULI4 1882 aaPredicted RBP23.03■■□□□ 1.28
CD47-202ENST00000361309 TOM1L1O75674 476 aa23.03■■□□□ 1.28
CD47-202ENST00000361309 SDHBP21912 280 aa23.03■■□□□ 1.28
CD47-202ENST00000361309 U2AF2P26368 475 aaKnown RBP eCLIP23.03■■□□□ 1.285e-11■■■■■ 31.2
CD47-202ENST00000361309 ATXN1P54253 815 aaKnown RBP23.03■■□□□ 1.28
CD47-202ENST00000361309 NRLP54845 237 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms