RNA–Protein interactions for RNA: ENST00000360779.3

SDCBP2-202, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-202ENST00000360779 HELQQ8TDG4 1101 aa17.84■□□□□ 0.45
SDCBP2-202ENST00000360779 LINC01599Q8WXQ3 324 aa17.84■□□□□ 0.45
SDCBP2-202ENST00000360779 SYN2Q92777 582 aaPredicted RBP17.84■□□□□ 0.45
SDCBP2-202ENST00000360779 HPDLQ96IR7 371 aa17.84■□□□□ 0.45
SDCBP2-202ENST00000360779 NIF3L1Q9GZT8 377 aa17.84■□□□□ 0.45
SDCBP2-202ENST00000360779 TSPYL2Q9H2G4 693 aaPredicted RBP17.84■□□□□ 0.45
SDCBP2-202ENST00000360779 APOBEC3GQ9HC16 384 aaKnown RBP17.84■□□□□ 0.45
SDCBP2-202ENST00000360779 SIX4Q9UIU6 781 aa17.84■□□□□ 0.45
SDCBP2-202ENST00000360779 NUB1Q9Y5A7 615 aa17.84■□□□□ 0.45
SDCBP2-202ENST00000360779 ANK1P16157 1881 aa17.83■□□□□ 0.45
SDCBP2-202ENST00000360779 C9IYK1 514 aa17.83■□□□□ 0.45
SDCBP2-202ENST00000360779 IPO7O95373 1038 aaKnown RBP17.83■□□□□ 0.45
SDCBP2-202ENST00000360779 SERPING1P05155 500 aa17.83■□□□□ 0.45
SDCBP2-202ENST00000360779 RFC2P35250 354 aa17.83■□□□□ 0.45
SDCBP2-202ENST00000360779 CYLC1P35663 651 aaPredicted RBP17.83■□□□□ 0.45
SDCBP2-202ENST00000360779 GCNT1Q02742 428 aa17.83■□□□□ 0.45
SDCBP2-202ENST00000360779 MEA1Q16626 185 aa17.83■□□□□ 0.45
SDCBP2-202ENST00000360779 WDR72Q3MJ13 1102 aa17.83■□□□□ 0.45
SDCBP2-202ENST00000360779 XKR4Q5GH76 650 aa17.83■□□□□ 0.45
SDCBP2-202ENST00000360779 GLB1LQ6UWU2 654 aa17.83■□□□□ 0.45
SDCBP2-202ENST00000360779 RTN4RL1Q86UN2 441 aaPredicted RBP17.83■□□□□ 0.45
SDCBP2-202ENST00000360779 TMEM139Q8IV31 216 aa17.83■□□□□ 0.45
SDCBP2-202ENST00000360779 URGCPQ8TCY9 931 aa17.83■□□□□ 0.45
SDCBP2-202ENST00000360779 CCDC42Q96M95 316 aa17.83■□□□□ 0.45
SDCBP2-202ENST00000360779 ZNF560Q96MR9 790 aa17.83■□□□□ 0.45
SDCBP2-202ENST00000360779 CHP1Q99653 195 aa17.83■□□□□ 0.45
SDCBP2-202ENST00000360779 PCDHB7Q9Y5E2 793 aa17.83■□□□□ 0.45
SDCBP2-202ENST00000360779 PCDHB4Q9Y5E5 795 aa17.83■□□□□ 0.45
SDCBP2-202ENST00000360779 TANC1Q9C0D5 1861 aa17.83■□□□□ 0.44
SDCBP2-202ENST00000360779 DNAH12Q6ZR08 3092 aa17.83■□□□□ 0.44
SDCBP2-202ENST00000360779 FOXN3O00409 490 aaPredicted RBP17.82■□□□□ 0.44
SDCBP2-202ENST00000360779 PTGESO14684 152 aa17.82■□□□□ 0.44
SDCBP2-202ENST00000360779 AKR1B10O60218 316 aa17.82■□□□□ 0.44
SDCBP2-202ENST00000360779 EOMESO95936 686 aa17.82■□□□□ 0.44
SDCBP2-202ENST00000360779 POMCP01189 267 aa17.82■□□□□ 0.44
SDCBP2-202ENST00000360779 CD58P19256 250 aa17.82■□□□□ 0.44
SDCBP2-202ENST00000360779 YWHAEP62258 255 aaKnown RBP17.82■□□□□ 0.44
SDCBP2-202ENST00000360779 E4F1Q66K89 784 aaPredicted RBP17.82■□□□□ 0.44
SDCBP2-202ENST00000360779 SCARA3Q6AZY7 606 aa17.82■□□□□ 0.44
SDCBP2-202ENST00000360779 WDR59Q6PJI9 974 aa17.82■□□□□ 0.44
SDCBP2-202ENST00000360779 ABI1Q8IZP0 508 aa17.82■□□□□ 0.44
SDCBP2-202ENST00000360779 KREMEN1Q96MU8 473 aa17.82■□□□□ 0.44
SDCBP2-202ENST00000360779 MMS19Q96T76 1030 aa17.82■□□□□ 0.44
SDCBP2-202ENST00000360779 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.82■□□□□ 0.44
SDCBP2-202ENST00000360779 NHEJ1Q9H9Q4 299 aaPredicted RBP17.82■□□□□ 0.44
SDCBP2-202ENST00000360779 GOLGA2P5Q9HBQ8 144 aa17.82■□□□□ 0.44
SDCBP2-202ENST00000360779 AIPL1Q9NZN9 384 aa17.82■□□□□ 0.44
SDCBP2-202ENST00000360779 POLIQ9UNA4 740 aa17.82■□□□□ 0.44
SDCBP2-202ENST00000360779 CITO14578 2027 aa17.82■□□□□ 0.44
SDCBP2-202ENST00000360779 ENPP3O14638 875 aa17.82■□□□□ 0.44
SDCBP2-202ENST00000360779 EVI5O60447 810 aa17.82■□□□□ 0.44
SDCBP2-202ENST00000360779 TIMP1P01033 207 aa17.82■□□□□ 0.44
SDCBP2-202ENST00000360779 CXCL10P02778 98 aa17.82■□□□□ 0.44
SDCBP2-202ENST00000360779 CYP3A5P20815 502 aa17.82■□□□□ 0.44
SDCBP2-202ENST00000360779 HNRNPH3P31942 346 aaKnown RBP17.82■□□□□ 0.44
SDCBP2-202ENST00000360779 EIF4A3P38919 411 aaKnown RBP17.82■□□□□ 0.44
SDCBP2-202ENST00000360779 IKBKEQ14164 716 aa17.82■□□□□ 0.44
SDCBP2-202ENST00000360779 GPNMBQ14956 572 aa17.82■□□□□ 0.44
SDCBP2-202ENST00000360779 ZBTB6Q15916 424 aa17.82■□□□□ 0.44
SDCBP2-202ENST00000360779 C9orf57Q5W0N0 161 aa17.82■□□□□ 0.44
SDCBP2-202ENST00000360779 VPS36Q86VN1 386 aa17.82■□□□□ 0.44
SDCBP2-202ENST00000360779 TMEM199Q8N511 208 aa17.82■□□□□ 0.44
SDCBP2-202ENST00000360779 ARID3AQ99856 593 aa17.82■□□□□ 0.44
SDCBP2-202ENST00000360779 SEPT11Q9NVA2 429 aaKnown RBP17.82■□□□□ 0.44
SDCBP2-202ENST00000360779 RNF216Q9NWF9 866 aaPredicted RBP17.82■□□□□ 0.44
SDCBP2-202ENST00000360779 BZW2Q9Y6E2 419 aaKnown RBP17.82■□□□□ 0.44
SDCBP2-202ENST00000360779 TRIM43BA6NCK2 446 aa17.81■□□□□ 0.44
SDCBP2-202ENST00000360779 PLEKP08567 350 aaPredicted RBP17.81■□□□□ 0.44
SDCBP2-202ENST00000360779 CDK17Q00537 523 aa17.81■□□□□ 0.44
SDCBP2-202ENST00000360779 MTF1Q14872 753 aa17.81■□□□□ 0.44
SDCBP2-202ENST00000360779 CNKSR3Q6P9H4 555 aa17.81■□□□□ 0.44
SDCBP2-202ENST00000360779 RAD9BQ6WBX8 426 aa17.81■□□□□ 0.44
SDCBP2-202ENST00000360779 FAM43BQ6ZT52 329 aaPredicted RBP17.81■□□□□ 0.44
SDCBP2-202ENST00000360779 TRIM43Q96BQ3 446 aaPredicted RBP17.81■□□□□ 0.44
SDCBP2-202ENST00000360779 PPP1R10Q96QC0 940 aaKnown RBP17.81■□□□□ 0.44
SDCBP2-202ENST00000360779 HAUS4Q9H6D7 363 aa17.81■□□□□ 0.44
SDCBP2-202ENST00000360779 TMEM161AQ9NX61 479 aa17.81■□□□□ 0.44
SDCBP2-202ENST00000360779 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.81■□□□□ 0.44
SDCBP2-202ENST00000360779 PPEF2O14830 753 aa17.8■□□□□ 0.44
SDCBP2-202ENST00000360779 KIAA0355O15063 1070 aa17.8■□□□□ 0.44
SDCBP2-202ENST00000360779 FECHP22830 423 aa17.8■□□□□ 0.44
SDCBP2-202ENST00000360779 PNPLA4P41247 253 aa17.8■□□□□ 0.44
SDCBP2-202ENST00000360779 RNASELQ05823 741 aaKnown RBP17.8■□□□□ 0.44
SDCBP2-202ENST00000360779 GRIK3Q13003 919 aa17.8■□□□□ 0.44
SDCBP2-202ENST00000360779 SV2CQ496J9 727 aa17.8■□□□□ 0.44
SDCBP2-202ENST00000360779 ZNF598Q86UK7 904 aaKnown RBP17.8■□□□□ 0.44
SDCBP2-202ENST00000360779 CCDC170Q8IYT3 715 aa17.8■□□□□ 0.44
SDCBP2-202ENST00000360779 LRRC52Q8N7C0 313 aa17.8■□□□□ 0.44
SDCBP2-202ENST00000360779 SHC3Q92529 594 aa17.8■□□□□ 0.44
SDCBP2-202ENST00000360779 FAM193BQ96PV7 902 aaPredicted RBP17.8■□□□□ 0.44
SDCBP2-202ENST00000360779 DESI2Q9BSY9 194 aa17.8■□□□□ 0.44
SDCBP2-202ENST00000360779 GPR88Q9GZN0 384 aa17.8■□□□□ 0.44
SDCBP2-202ENST00000360779 XYLT2Q9H1B5 865 aa17.8■□□□□ 0.44
SDCBP2-202ENST00000360779 MIOSQ9NXC5 875 aa17.8■□□□□ 0.44
SDCBP2-202ENST00000360779 ARHGAP20Q9P2F6 1191 aa17.8■□□□□ 0.44
SDCBP2-202ENST00000360779 CASTOR2A6NHX0 329 aa17.79■□□□□ 0.44
SDCBP2-202ENST00000360779 CYP26A1O43174 497 aa17.79■□□□□ 0.44
SDCBP2-202ENST00000360779 WEE2P0C1S8 567 aa17.79■□□□□ 0.44
SDCBP2-202ENST00000360779 FGFR1P11362 822 aa17.79■□□□□ 0.44
SDCBP2-202ENST00000360779 RAP1GAPP47736 663 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms