RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 ANKMY2Q8IV38 441 aa13.82□□□□□ -0.2
SRGAP3-201ENST00000360413 OR6B3Q8NGW1 331 aa13.82□□□□□ -0.2
SRGAP3-201ENST00000360413 ADGRA3Q8IWK6 1321 aa13.82□□□□□ -0.2
SRGAP3-201ENST00000360413 TBKBP1A7MCY6 615 aa13.82□□□□□ -0.2
SRGAP3-201ENST00000360413 BNIP3LO60238 219 aa13.82□□□□□ -0.2
SRGAP3-201ENST00000360413 SOX11P35716 441 aa13.82□□□□□ -0.2
SRGAP3-201ENST00000360413 SEC24CP53992 1094 aa13.82□□□□□ -0.2
SRGAP3-201ENST00000360413 DPYDQ12882 1025 aa13.82□□□□□ -0.2
SRGAP3-201ENST00000360413 BNIPLQ7Z465 357 aa13.82□□□□□ -0.2
SRGAP3-201ENST00000360413 STKLD1Q8NE28 680 aa13.82□□□□□ -0.2
SRGAP3-201ENST00000360413 ZNF483Q8TF39 744 aaPredicted RBP13.82□□□□□ -0.2
SRGAP3-201ENST00000360413 PPEF1O14829 653 aaPredicted RBP13.82□□□□□ -0.2
SRGAP3-201ENST00000360413 ITGB3BPQ13352 177 aaPredicted RBP13.82□□□□□ -0.2
SRGAP3-201ENST00000360413 TTLL4Q14679 1199 aa13.82□□□□□ -0.2
SRGAP3-201ENST00000360413 SYDE2Q5VT97 1194 aa13.82□□□□□ -0.2
SRGAP3-201ENST00000360413 RNF25Q96BH1 459 aaPredicted RBP13.82□□□□□ -0.2
SRGAP3-201ENST00000360413 PDLIM2Q96JY6 352 aa13.82□□□□□ -0.2
SRGAP3-201ENST00000360413 KLHL4Q9C0H6 718 aa13.82□□□□□ -0.2
SRGAP3-201ENST00000360413 MYLK2Q9H1R3 596 aa13.82□□□□□ -0.2
SRGAP3-201ENST00000360413 ADAM30Q9UKF2 790 aa13.82□□□□□ -0.2
SRGAP3-201ENST00000360413 ABCC4O15439 1325 aa13.82□□□□□ -0.2
SRGAP3-201ENST00000360413 CDH16O75309 829 aa13.82□□□□□ -0.2
SRGAP3-201ENST00000360413 PTGISQ16647 500 aa13.82□□□□□ -0.2
SRGAP3-201ENST00000360413 FBXO31Q5XUX0 539 aaPredicted RBP13.82□□□□□ -0.2
SRGAP3-201ENST00000360413 KRT77Q7Z794 578 aa13.82□□□□□ -0.2
SRGAP3-201ENST00000360413 RTKN2Q8IZC4 609 aa13.82□□□□□ -0.2
SRGAP3-201ENST00000360413 CALML6Q8TD86 181 aa13.82□□□□□ -0.2
SRGAP3-201ENST00000360413 TBC1D22BQ9NU19 505 aa13.82□□□□□ -0.2
SRGAP3-201ENST00000360413 ERAP1Q9NZ08 941 aa13.82□□□□□ -0.2
SRGAP3-201ENST00000360413 PSMD14O00487 310 aa13.82□□□□□ -0.2
SRGAP3-201ENST00000360413 PURAQ00577 322 aaKnown RBP13.82□□□□□ -0.2
SRGAP3-201ENST00000360413 MFSD14CQ5VZR4 134 aa13.82□□□□□ -0.2
SRGAP3-201ENST00000360413 ACCSLQ4AC99 568 aa13.82□□□□□ -0.2
SRGAP3-201ENST00000360413 IFNEQ86WN2 208 aa13.82□□□□□ -0.2
SRGAP3-201ENST00000360413 RNPC3Q96LT9 517 aaKnown RBP13.82□□□□□ -0.2
SRGAP3-201ENST00000360413 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.82□□□□□ -0.2
SRGAP3-201ENST00000360413 COG2Q14746 738 aa13.82□□□□□ -0.2
SRGAP3-201ENST00000360413 NOL6Q9H6R4 1146 aaKnown RBP13.82□□□□□ -0.2
SRGAP3-201ENST00000360413 MYH6P13533 1939 aa13.81□□□□□ -0.2
SRGAP3-201ENST00000360413 SHANK2Q9UPX8 1470 aa13.81□□□□□ -0.2
SRGAP3-201ENST00000360413 NPC1L1Q9UHC9 1359 aa13.81□□□□□ -0.2
SRGAP3-201ENST00000360413 TCP10L2B9ZVM9 353 aa13.81□□□□□ -0.2
SRGAP3-201ENST00000360413 SERPINB8P50452 374 aa13.81□□□□□ -0.2
SRGAP3-201ENST00000360413 ADARP55265 1226 aaKnown RBP13.81□□□□□ -0.2
SRGAP3-201ENST00000360413 C6orf10Q5SRN2 563 aa13.81□□□□□ -0.2
SRGAP3-201ENST00000360413 C2orf69Q8N8R5 385 aa13.81□□□□□ -0.2
SRGAP3-201ENST00000360413 EXD1Q8NHP7 514 aa13.81□□□□□ -0.2
SRGAP3-201ENST00000360413 TNIP3Q96KP6 325 aa13.81□□□□□ -0.2
SRGAP3-201ENST00000360413 MOV10L1Q9BXT6 1211 aaKnown RBP13.81□□□□□ -0.2
SRGAP3-201ENST00000360413 PNMA6FA0A0J9YX94 578 aa13.81□□□□□ -0.2
SRGAP3-201ENST00000360413 TMEM120BA0PK00 339 aa13.81□□□□□ -0.2
SRGAP3-201ENST00000360413 KIAA0391O15091 583 aaKnown RBP13.81□□□□□ -0.2
SRGAP3-201ENST00000360413 ATAD3BQ5T9A4 648 aa13.81□□□□□ -0.2
SRGAP3-201ENST00000360413 SLC10A4Q96EP9 437 aa13.81□□□□□ -0.2
SRGAP3-201ENST00000360413 C17orf80Q9BSJ5 609 aa13.81□□□□□ -0.2
SRGAP3-201ENST00000360413 V9GYQ6 96 aa13.81□□□□□ -0.2
SRGAP3-201ENST00000360413 NEURL1BA8MQ27 555 aa13.81□□□□□ -0.2
SRGAP3-201ENST00000360413 CLASP2O75122 1294 aaKnown RBP13.81□□□□□ -0.2
SRGAP3-201ENST00000360413 FOSL2P15408 326 aa13.81□□□□□ -0.2
SRGAP3-201ENST00000360413 FNTAP49354 379 aa13.81□□□□□ -0.2
SRGAP3-201ENST00000360413 TSR3Q9UJK0 312 aaKnown RBP13.81□□□□□ -0.2
SRGAP3-201ENST00000360413 SNX12Q9UMY4 172 aa13.81□□□□□ -0.2
SRGAP3-201ENST00000360413 TRIM49BA6NDI0 452 aa13.81□□□□□ -0.2
SRGAP3-201ENST00000360413 KRT6AP02538 564 aa13.81□□□□□ -0.2
SRGAP3-201ENST00000360413 KRT6BP04259 564 aa13.81□□□□□ -0.2
SRGAP3-201ENST00000360413 KRT6CP48668 564 aa13.81□□□□□ -0.2
SRGAP3-201ENST00000360413 UGT3A1Q6NUS8 523 aa13.81□□□□□ -0.2
SRGAP3-201ENST00000360413 LPCAT2Q7L5N7 544 aa13.81□□□□□ -0.2
SRGAP3-201ENST00000360413 REXO4Q9GZR2 422 aaKnown RBP13.81□□□□□ -0.2
SRGAP3-201ENST00000360413 IARS2Q9NSE4 1012 aaKnown RBP13.81□□□□□ -0.2
SRGAP3-201ENST00000360413 PSMC3IPQ9P2W1 217 aaPredicted RBP13.81□□□□□ -0.2
SRGAP3-201ENST00000360413 GDAQ9Y2T3 454 aa13.81□□□□□ -0.2
SRGAP3-201ENST00000360413 MLH3Q9UHC1 1453 aa13.81□□□□□ -0.2
SRGAP3-201ENST00000360413 CCT3P49368 545 aaKnown RBP13.81□□□□□ -0.2
SRGAP3-201ENST00000360413 KLHL12Q53G59 568 aa13.81□□□□□ -0.2
SRGAP3-201ENST00000360413 ZHX2Q9Y6X8 837 aa13.81□□□□□ -0.2
SRGAP3-201ENST00000360413 MYOM2P54296 1465 aa13.81□□□□□ -0.2
SRGAP3-201ENST00000360413 PBRM1Q86U86 1689 aa13.81□□□□□ -0.2
SRGAP3-201ENST00000360413 FKBP9O95302 570 aa13.81□□□□□ -0.2
SRGAP3-201ENST00000360413 ILF2Q12905 390 aaKnown RBP13.81□□□□□ -0.2
SRGAP3-201ENST00000360413 PDAP1Q13442 181 aaKnown RBP13.81□□□□□ -0.2
SRGAP3-201ENST00000360413 ARMC3Q5W041 872 aa13.81□□□□□ -0.2
SRGAP3-201ENST00000360413 FKBP9P1Q75LS8 142 aa13.81□□□□□ -0.2
SRGAP3-201ENST00000360413 OXCT2Q9BYC2 517 aaPredicted RBP13.81□□□□□ -0.2
SRGAP3-201ENST00000360413 MAP3K19Q56UN5 1328 aa13.81□□□□□ -0.2
SRGAP3-201ENST00000360413 ITIH4Q14624 930 aa13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 R3HDM1Q15032 1099 aaKnown RBP13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 KLHL17Q6TDP4 642 aa13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 STX7O15400 261 aaKnown RBP13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 DGKIO75912 1065 aa13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 MLNP12872 115 aa13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 KCNJ6P48051 423 aa13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 LRRC74AQ0VAA2 488 aa13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 ANKS6Q68DC2 871 aa13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 MOSPD2Q8NHP6 518 aa13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 ARMC7Q9H6L4 198 aa13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 TLR2O60603 784 aa13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 PDHBP11177 359 aa13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 CPA2P48052 419 aa13.8□□□□□ -0.2
SRGAP3-201ENST00000360413 KRT76Q01546 638 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms